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Potassium in PDB 7a56: Schmallenberg Virus Envelope Glycoprotein Gc Fusion Domains in Postfusion Conformation

Protein crystallography data

The structure of Schmallenberg Virus Envelope Glycoprotein Gc Fusion Domains in Postfusion Conformation, PDB code: 7a56 was solved by J.Hellert, P.Guardado-Calvo, F.A.Rey, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 43.41 / 1.85
Space group H 3 2
Cell size a, b, c (Å), α, β, γ (°) 86.79, 86.79, 358.09, 90, 90, 120
R / Rfree (%) 17 / 20.9

Other elements in 7a56:

The structure of Schmallenberg Virus Envelope Glycoprotein Gc Fusion Domains in Postfusion Conformation also contains other interesting chemical elements:

Sodium (Na) 4 atoms
Chlorine (Cl) 6 atoms

Potassium Binding Sites:

The binding sites of Potassium atom in the Schmallenberg Virus Envelope Glycoprotein Gc Fusion Domains in Postfusion Conformation (pdb code 7a56). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total only one binding site of Potassium was determined in the Schmallenberg Virus Envelope Glycoprotein Gc Fusion Domains in Postfusion Conformation, PDB code: 7a56:

Potassium binding site 1 out of 1 in 7a56

Go back to Potassium Binding Sites List in 7a56
Potassium binding site 1 out of 1 in the Schmallenberg Virus Envelope Glycoprotein Gc Fusion Domains in Postfusion Conformation


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of Schmallenberg Virus Envelope Glycoprotein Gc Fusion Domains in Postfusion Conformation within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K1414

b:46.3
occ:0.50
CL A:CL1406 3.2 45.6 0.2
CD2 A:TRP1029 3.9 34.9 1.0
CG A:TRP1029 4.0 31.8 1.0
O A:HOH1911 4.1 51.9 1.0
CE3 A:TRP1029 4.3 37.6 1.0
CE2 A:TRP1029 4.3 36.8 1.0
O A:HOH1919 4.3 72.9 0.3
CB A:TRP1029 4.4 28.8 1.0
CD1 A:TRP1029 4.4 34.2 1.0
NE1 A:TRP1029 4.5 37.6 1.0
CZ3 A:TRP1029 4.9 44.0 1.0
CZ2 A:TRP1029 4.9 39.8 1.0

Reference:

J.Hellert, A.Aebischer, A.Haouz, P.Guardado-Calvo, S.Reiche, M.Beer, F.A.Rey. Structure, Function and Evolution of the Orthobunyavirus Envelope Glycoprotein Gc Core Fragment To Be Published.
Page generated: Mon Aug 12 18:35:59 2024

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