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Potassium in PDB 6wmf: Human SUN2-KASH5 Complex

Protein crystallography data

The structure of Human SUN2-KASH5 Complex, PDB code: 6wmf was solved by V.E.Cruz, T.U.Schwartz, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 83.15 / 2.60
Space group H 3 2
Cell size a, b, c (Å), α, β, γ (°) 78.435, 78.435, 249.441, 90.00, 90.00, 120.00
R / Rfree (%) 22.1 / 28.6

Potassium Binding Sites:

The binding sites of Potassium atom in the Human SUN2-KASH5 Complex (pdb code 6wmf). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total only one binding site of Potassium was determined in the Human SUN2-KASH5 Complex, PDB code: 6wmf:

Potassium binding site 1 out of 1 in 6wmf

Go back to Potassium Binding Sites List in 6wmf
Potassium binding site 1 out of 1 in the Human SUN2-KASH5 Complex


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of Human SUN2-KASH5 Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K801

b:96.4
occ:1.00
O A:GLN593 2.8 59.0 1.0
O A:ASP595 2.8 76.1 1.0
O A:VAL590 2.8 90.7 1.0
O A:TYR707 3.0 76.2 1.0
O A:ASN600 3.5 87.2 1.0
C A:GLN593 3.6 71.8 1.0
C A:VAL590 3.7 88.2 1.0
C A:ASP595 3.8 77.7 1.0
CB A:GLN593 4.0 69.6 1.0
C A:TYR707 4.0 66.3 1.0
CB A:VAL590 4.1 59.0 1.0
CG1 A:VAL596 4.2 63.3 1.0
CA A:GLN593 4.2 80.3 1.0
N A:ASP595 4.2 71.2 1.0
CG2 A:VAL590 4.3 52.4 1.0
CA A:VAL590 4.3 77.3 1.0
N A:GLN593 4.4 63.2 1.0
C A:PRO594 4.4 70.5 1.0
N A:PRO594 4.5 58.9 1.0
CA A:ASP595 4.5 71.4 1.0
C A:ASN600 4.6 76.6 1.0
N A:ILE591 4.6 82.4 1.0
O A:PRO594 4.7 86.3 1.0
CB A:ASN600 4.7 85.8 1.0
N A:VAL596 4.7 85.3 1.0
CB A:ARG708 4.7 60.6 1.0
CA A:TYR707 4.7 70.2 1.0
CA A:VAL596 4.8 79.3 1.0
CA A:ILE591 4.8 70.0 1.0
CA A:PRO594 4.9 52.7 1.0
N A:ARG708 4.9 78.7 1.0
CA A:ARG708 5.0 71.6 1.0

Reference:

V.E.Cruz, F.Esra Demircioglu, T.U.Schwartz. Structural Analysis of Different Linc Complexes Reveals Distinct Binding Modes. J.Mol.Biol. V. 432 6028 2020.
ISSN: ESSN 1089-8638
PubMed: 33058875
DOI: 10.1016/J.JMB.2020.09.019
Page generated: Mon Aug 12 18:16:34 2024

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