Potassium in PDB 6wlv: TASK2 in MSP1D1 Lipid Nanodisc at pH 6.5
Potassium Binding Sites:
The binding sites of Potassium atom in the TASK2 in MSP1D1 Lipid Nanodisc at pH 6.5
(pdb code 6wlv). This binding sites where shown within
5.0 Angstroms radius around Potassium atom.
In total 3 binding sites of Potassium where determined in the
TASK2 in MSP1D1 Lipid Nanodisc at pH 6.5, PDB code: 6wlv:
Jump to Potassium binding site number:
1;
2;
3;
Potassium binding site 1 out
of 3 in 6wlv
Go back to
Potassium Binding Sites List in 6wlv
Potassium binding site 1 out
of 3 in the TASK2 in MSP1D1 Lipid Nanodisc at pH 6.5
Mono view
Stereo pair view
|
A full contact list of Potassium with other atoms in the K binding
site number 1 of TASK2 in MSP1D1 Lipid Nanodisc at pH 6.5 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:K401
b:39.9
occ:1.00
|
O
|
B:ILE204
|
2.6
|
34.8
|
1.0
|
O
|
A:ILE204
|
2.6
|
31.3
|
1.0
|
O
|
A:GLY100
|
2.6
|
34.8
|
1.0
|
O
|
B:GLY100
|
2.6
|
34.9
|
1.0
|
O
|
B:ILE99
|
2.7
|
33.1
|
1.0
|
O
|
B:GLY205
|
2.7
|
33.9
|
1.0
|
K
|
A:K402
|
2.8
|
34.2
|
1.0
|
O
|
A:GLY205
|
2.8
|
33.0
|
1.0
|
O
|
A:ILE99
|
2.8
|
34.2
|
1.0
|
C
|
A:GLY100
|
3.6
|
34.8
|
1.0
|
C
|
B:GLY205
|
3.6
|
33.9
|
1.0
|
C
|
B:GLY100
|
3.6
|
34.9
|
1.0
|
C
|
A:GLY205
|
3.7
|
33.0
|
1.0
|
C
|
B:ILE204
|
3.7
|
34.8
|
1.0
|
C
|
A:ILE204
|
3.8
|
31.3
|
1.0
|
C
|
B:ILE99
|
3.9
|
33.1
|
1.0
|
C
|
A:ILE99
|
4.0
|
34.2
|
1.0
|
CA
|
B:GLY205
|
4.0
|
33.9
|
1.0
|
CA
|
A:GLY100
|
4.1
|
34.8
|
1.0
|
CA
|
A:GLY205
|
4.2
|
33.0
|
1.0
|
CA
|
B:GLY100
|
4.2
|
34.9
|
1.0
|
N
|
B:GLY205
|
4.4
|
33.9
|
1.0
|
O
|
B:TYR101
|
4.4
|
36.0
|
1.0
|
N
|
A:GLY205
|
4.4
|
33.0
|
1.0
|
N
|
B:GLY100
|
4.5
|
34.9
|
1.0
|
N
|
A:GLY100
|
4.6
|
34.8
|
1.0
|
N
|
A:TYR101
|
4.6
|
37.5
|
1.0
|
N
|
B:TYR101
|
4.6
|
36.0
|
1.0
|
N
|
B:PHE206
|
4.7
|
35.6
|
1.0
|
N
|
A:PHE206
|
4.7
|
34.5
|
1.0
|
O
|
A:TYR101
|
4.8
|
37.5
|
1.0
|
C
|
B:TYR101
|
4.9
|
36.0
|
1.0
|
CA
|
B:TYR101
|
4.9
|
36.0
|
1.0
|
CA
|
A:ILE204
|
4.9
|
31.3
|
1.0
|
CA
|
B:ILE204
|
4.9
|
34.8
|
1.0
|
C
|
A:TYR101
|
5.0
|
37.5
|
1.0
|
CA
|
A:TYR101
|
5.0
|
37.5
|
1.0
|
CA
|
B:ILE99
|
5.0
|
33.1
|
1.0
|
|
Potassium binding site 2 out
of 3 in 6wlv
Go back to
Potassium Binding Sites List in 6wlv
Potassium binding site 2 out
of 3 in the TASK2 in MSP1D1 Lipid Nanodisc at pH 6.5
Mono view
Stereo pair view
|
A full contact list of Potassium with other atoms in the K binding
site number 2 of TASK2 in MSP1D1 Lipid Nanodisc at pH 6.5 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:K402
b:34.2
occ:1.00
|
O
|
A:ILE99
|
2.8
|
34.2
|
1.0
|
O
|
B:THR98
|
2.8
|
35.4
|
1.0
|
K
|
A:K401
|
2.8
|
39.9
|
1.0
|
O
|
B:THR203
|
2.8
|
34.9
|
1.0
|
O
|
B:ILE204
|
2.8
|
34.8
|
1.0
|
O
|
A:THR203
|
2.8
|
32.1
|
1.0
|
O
|
A:ILE204
|
2.8
|
31.3
|
1.0
|
O
|
B:ILE99
|
2.9
|
33.1
|
1.0
|
O
|
A:THR98
|
2.9
|
36.5
|
1.0
|
C
|
B:ILE204
|
3.6
|
34.8
|
1.0
|
C
|
A:ILE204
|
3.6
|
31.3
|
1.0
|
K
|
A:K403
|
3.6
|
34.6
|
1.0
|
C
|
B:ILE99
|
3.6
|
33.1
|
1.0
|
C
|
A:ILE99
|
3.7
|
34.2
|
1.0
|
C
|
A:THR203
|
3.9
|
32.1
|
1.0
|
C
|
B:THR98
|
3.9
|
35.4
|
1.0
|
C
|
B:THR203
|
3.9
|
34.9
|
1.0
|
CA
|
A:ILE204
|
3.9
|
31.3
|
1.0
|
CA
|
B:ILE204
|
4.0
|
34.8
|
1.0
|
CA
|
B:ILE99
|
4.0
|
33.1
|
1.0
|
C
|
A:THR98
|
4.1
|
36.5
|
1.0
|
CA
|
A:ILE99
|
4.2
|
34.2
|
1.0
|
N
|
A:ILE204
|
4.4
|
31.3
|
1.0
|
N
|
B:ILE204
|
4.4
|
34.8
|
1.0
|
N
|
B:ILE99
|
4.4
|
33.1
|
1.0
|
N
|
B:GLY205
|
4.6
|
33.9
|
1.0
|
N
|
A:GLY205
|
4.6
|
33.0
|
1.0
|
N
|
A:ILE99
|
4.6
|
34.2
|
1.0
|
N
|
A:GLY100
|
4.6
|
34.8
|
1.0
|
N
|
B:GLY100
|
4.7
|
34.9
|
1.0
|
O
|
A:GLY100
|
4.7
|
34.8
|
1.0
|
O
|
B:GLY100
|
4.7
|
34.9
|
1.0
|
O
|
B:GLY205
|
4.9
|
33.9
|
1.0
|
O
|
A:GLY205
|
4.9
|
33.0
|
1.0
|
CA
|
A:GLY100
|
4.9
|
34.8
|
1.0
|
CA
|
B:GLY205
|
4.9
|
33.9
|
1.0
|
|
Potassium binding site 3 out
of 3 in 6wlv
Go back to
Potassium Binding Sites List in 6wlv
Potassium binding site 3 out
of 3 in the TASK2 in MSP1D1 Lipid Nanodisc at pH 6.5
Mono view
Stereo pair view
|
A full contact list of Potassium with other atoms in the K binding
site number 3 of TASK2 in MSP1D1 Lipid Nanodisc at pH 6.5 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:K403
b:34.6
occ:1.00
|
O
|
B:THR98
|
2.8
|
35.4
|
1.0
|
O
|
A:THR203
|
2.8
|
32.1
|
1.0
|
OG1
|
A:THR203
|
2.9
|
32.1
|
1.0
|
O
|
B:THR203
|
2.9
|
34.9
|
1.0
|
OG1
|
B:THR203
|
2.9
|
34.9
|
1.0
|
O
|
A:THR98
|
2.9
|
36.5
|
1.0
|
OG1
|
A:THR98
|
2.9
|
36.5
|
1.0
|
OG1
|
B:THR98
|
3.0
|
35.4
|
1.0
|
CB
|
B:THR98
|
3.4
|
35.4
|
1.0
|
CB
|
A:THR98
|
3.5
|
36.5
|
1.0
|
CB
|
A:THR203
|
3.5
|
32.1
|
1.0
|
K
|
A:K402
|
3.6
|
34.2
|
1.0
|
CB
|
B:THR203
|
3.6
|
34.9
|
1.0
|
C
|
B:THR98
|
3.8
|
35.4
|
1.0
|
C
|
B:THR203
|
3.9
|
34.9
|
1.0
|
C
|
A:THR203
|
3.9
|
32.1
|
1.0
|
C
|
A:THR98
|
3.9
|
36.5
|
1.0
|
CA
|
B:THR98
|
4.3
|
35.4
|
1.0
|
CA
|
A:THR98
|
4.3
|
36.5
|
1.0
|
CA
|
A:THR203
|
4.3
|
32.1
|
1.0
|
CA
|
B:THR203
|
4.4
|
34.9
|
1.0
|
CG2
|
B:THR98
|
4.6
|
35.4
|
1.0
|
O
|
B:SER202
|
4.7
|
34.5
|
1.0
|
CG2
|
A:THR98
|
4.7
|
36.5
|
1.0
|
CG2
|
A:THR203
|
4.7
|
32.1
|
1.0
|
CG2
|
B:THR203
|
4.9
|
34.9
|
1.0
|
N
|
B:ILE204
|
4.9
|
34.8
|
1.0
|
N
|
B:ILE99
|
4.9
|
33.1
|
1.0
|
N
|
A:ILE99
|
4.9
|
34.2
|
1.0
|
O
|
A:SER202
|
5.0
|
34.9
|
1.0
|
N
|
A:ILE204
|
5.0
|
31.3
|
1.0
|
|
Reference:
B.Li,
R.A.Rietmeijer,
S.G.Brohawn.
Structural Basis For pH Gating of the Two-Pore Domain K + Channel TASK2. Nature V. 586 457 2020.
ISSN: ESSN 1476-4687
PubMed: 32999458
DOI: 10.1038/S41586-020-2770-2
Page generated: Mon Aug 12 18:16:20 2024
|