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Potassium in PDB 6tmx: Structure of the Chaperonin GP146 From the Bacteriophage El (Pseudomonas Aeruginosa) in Complex with Atpgammas

Other elements in 6tmx:

The structure of Structure of the Chaperonin GP146 From the Bacteriophage El (Pseudomonas Aeruginosa) in Complex with Atpgammas also contains other interesting chemical elements:

Magnesium (Mg) 14 atoms

Potassium Binding Sites:

Pages:

>>> Page 1 <<< Page 2, Binding sites: 11 - 14;

Binding sites:

The binding sites of Potassium atom in the Structure of the Chaperonin GP146 From the Bacteriophage El (Pseudomonas Aeruginosa) in Complex with Atpgammas (pdb code 6tmx). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total 14 binding sites of Potassium where determined in the Structure of the Chaperonin GP146 From the Bacteriophage El (Pseudomonas Aeruginosa) in Complex with Atpgammas, PDB code: 6tmx:
Jump to Potassium binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Potassium binding site 1 out of 14 in 6tmx

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Potassium binding site 1 out of 14 in the Structure of the Chaperonin GP146 From the Bacteriophage El (Pseudomonas Aeruginosa) in Complex with Atpgammas


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of Structure of the Chaperonin GP146 From the Bacteriophage El (Pseudomonas Aeruginosa) in Complex with Atpgammas within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K602

b:1.0
occ:1.00
O1A A:AGS603 2.6 0.6 1.0
O2A A:AGS603 2.9 0.3 1.0
PA A:AGS603 3.1 0.7 1.0
O3A A:AGS603 4.0 0.8 1.0
O A:THR30 4.2 65.9 1.0
S1G A:AGS603 4.2 0.7 1.0
N A:GLY32 4.3 93.8 1.0
O3B A:AGS603 4.3 0.4 1.0
NZ A:LYS50 4.5 0.6 1.0
O A:LYS50 4.6 0.4 1.0
O5' A:AGS603 4.6 0.5 1.0
O A:GLY32 4.7 0.9 1.0
PB A:AGS603 4.9 0.2 1.0
PG A:AGS603 4.9 0.7 1.0
CA A:GLY32 4.9 98.5 1.0
C A:GLY32 4.9 0.0 1.0

Potassium binding site 2 out of 14 in 6tmx

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Potassium binding site 2 out of 14 in the Structure of the Chaperonin GP146 From the Bacteriophage El (Pseudomonas Aeruginosa) in Complex with Atpgammas


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 2 of Structure of the Chaperonin GP146 From the Bacteriophage El (Pseudomonas Aeruginosa) in Complex with Atpgammas within 5.0Å range:
probe atom residue distance (Å) B Occ
B:K602

b:0.9
occ:1.00
O1A B:AGS603 2.6 0.5 1.0
O2A B:AGS603 2.9 0.2 1.0
PA B:AGS603 3.1 0.8 1.0
O3A B:AGS603 4.0 0.2 1.0
O B:THR30 4.2 66.3 1.0
S1G B:AGS603 4.2 0.0 1.0
N B:GLY32 4.3 96.7 1.0
O3B B:AGS603 4.3 0.0 1.0
NZ B:LYS50 4.5 0.5 1.0
O5' B:AGS603 4.5 0.1 1.0
O B:LYS50 4.6 0.1 1.0
O B:GLY32 4.6 0.6 1.0
PB B:AGS603 4.9 0.4 1.0
CA B:GLY32 4.9 0.6 1.0
C B:GLY32 4.9 0.9 1.0
PG B:AGS603 4.9 0.1 1.0

Potassium binding site 3 out of 14 in 6tmx

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Potassium binding site 3 out of 14 in the Structure of the Chaperonin GP146 From the Bacteriophage El (Pseudomonas Aeruginosa) in Complex with Atpgammas


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 3 of Structure of the Chaperonin GP146 From the Bacteriophage El (Pseudomonas Aeruginosa) in Complex with Atpgammas within 5.0Å range:
probe atom residue distance (Å) B Occ
C:K602

b:0.2
occ:1.00
O1A C:AGS603 2.6 0.7 1.0
O2A C:AGS603 2.9 0.9 1.0
PA C:AGS603 3.1 0.9 1.0
O3A C:AGS603 4.0 0.4 1.0
O C:THR30 4.2 67.3 1.0
S1G C:AGS603 4.2 0.5 1.0
N C:GLY32 4.3 92.4 1.0
O3B C:AGS603 4.3 0.1 1.0
NZ C:LYS50 4.5 0.7 1.0
O C:LYS50 4.6 0.3 1.0
O5' C:AGS603 4.6 0.5 1.0
O C:GLY32 4.7 0.1 1.0
PB C:AGS603 4.9 0.3 1.0
PG C:AGS603 4.9 1.0 1.0
CA C:GLY32 4.9 96.8 1.0
C C:GLY32 4.9 0.1 1.0

Potassium binding site 4 out of 14 in 6tmx

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Potassium binding site 4 out of 14 in the Structure of the Chaperonin GP146 From the Bacteriophage El (Pseudomonas Aeruginosa) in Complex with Atpgammas


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 4 of Structure of the Chaperonin GP146 From the Bacteriophage El (Pseudomonas Aeruginosa) in Complex with Atpgammas within 5.0Å range:
probe atom residue distance (Å) B Occ
D:K602

b:0.8
occ:1.00
O1A D:AGS603 2.6 0.6 1.0
O2A D:AGS603 2.9 0.2 1.0
PA D:AGS603 3.1 0.3 1.0
O3A D:AGS603 4.0 0.5 1.0
O D:THR30 4.2 64.3 1.0
S1G D:AGS603 4.2 0.7 1.0
N D:GLY32 4.3 91.3 1.0
O3B D:AGS603 4.3 0.8 1.0
NZ D:LYS50 4.5 0.7 1.0
O5' D:AGS603 4.6 1.0 1.0
O D:LYS50 4.6 0.6 1.0
O D:GLY32 4.7 0.1 1.0
PB D:AGS603 4.9 0.5 1.0
PG D:AGS603 4.9 0.5 1.0
CA D:GLY32 4.9 96.7 1.0
C D:GLY32 4.9 0.6 1.0

Potassium binding site 5 out of 14 in 6tmx

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Potassium binding site 5 out of 14 in the Structure of the Chaperonin GP146 From the Bacteriophage El (Pseudomonas Aeruginosa) in Complex with Atpgammas


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 5 of Structure of the Chaperonin GP146 From the Bacteriophage El (Pseudomonas Aeruginosa) in Complex with Atpgammas within 5.0Å range:
probe atom residue distance (Å) B Occ
E:K602

b:0.5
occ:1.00
O1A E:AGS603 2.7 1.0 1.0
O2A E:AGS603 2.9 0.4 1.0
PA E:AGS603 3.2 0.9 1.0
O3A E:AGS603 4.0 0.4 1.0
O E:THR30 4.1 67.2 1.0
S1G E:AGS603 4.2 0.6 1.0
N E:GLY32 4.3 92.5 1.0
O3B E:AGS603 4.3 0.1 1.0
NZ E:LYS50 4.5 0.3 1.0
O E:LYS50 4.5 0.4 1.0
O5' E:AGS603 4.6 0.3 1.0
O E:GLY32 4.6 0.2 1.0
PB E:AGS603 4.9 0.4 1.0
CA E:GLY32 4.9 96.7 1.0
C E:GLY32 4.9 0.1 1.0
PG E:AGS603 4.9 0.5 1.0

Potassium binding site 6 out of 14 in 6tmx

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Potassium binding site 6 out of 14 in the Structure of the Chaperonin GP146 From the Bacteriophage El (Pseudomonas Aeruginosa) in Complex with Atpgammas


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 6 of Structure of the Chaperonin GP146 From the Bacteriophage El (Pseudomonas Aeruginosa) in Complex with Atpgammas within 5.0Å range:
probe atom residue distance (Å) B Occ
F:K602

b:0.9
occ:1.00
O1A F:AGS603 2.6 0.0 1.0
O2A F:AGS603 2.9 0.2 1.0
PA F:AGS603 3.1 0.4 1.0
O3A F:AGS603 4.0 0.2 1.0
O F:THR30 4.1 66.3 1.0
S1G F:AGS603 4.2 0.8 1.0
N F:GLY32 4.2 92.9 1.0
O3B F:AGS603 4.3 0.7 1.0
NZ F:LYS50 4.5 0.7 1.0
O5' F:AGS603 4.6 0.2 1.0
O F:LYS50 4.6 0.8 1.0
O F:GLY32 4.6 0.1 1.0
PB F:AGS603 4.9 0.2 1.0
CA F:GLY32 4.9 98.4 1.0
C F:GLY32 4.9 0.1 1.0
PG F:AGS603 4.9 0.3 1.0
CA F:MET31 5.0 81.8 1.0

Potassium binding site 7 out of 14 in 6tmx

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Potassium binding site 7 out of 14 in the Structure of the Chaperonin GP146 From the Bacteriophage El (Pseudomonas Aeruginosa) in Complex with Atpgammas


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 7 of Structure of the Chaperonin GP146 From the Bacteriophage El (Pseudomonas Aeruginosa) in Complex with Atpgammas within 5.0Å range:
probe atom residue distance (Å) B Occ
G:K602

b:0.9
occ:1.00
O1A G:AGS603 2.6 0.8 1.0
O2A G:AGS603 2.9 0.9 1.0
PA G:AGS603 3.1 0.4 1.0
O3A G:AGS603 4.0 0.8 1.0
O G:THR30 4.2 65.4 1.0
S1G G:AGS603 4.2 0.6 1.0
N G:GLY32 4.3 92.0 1.0
O3B G:AGS603 4.3 0.5 1.0
NZ G:LYS50 4.5 0.7 1.0
O5' G:AGS603 4.6 0.7 1.0
O G:LYS50 4.6 0.3 1.0
O G:GLY32 4.7 0.2 1.0
PB G:AGS603 4.9 0.7 1.0
PG G:AGS603 4.9 0.6 1.0
CA G:GLY32 4.9 96.5 1.0
C G:GLY32 4.9 0.2 1.0

Potassium binding site 8 out of 14 in 6tmx

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Potassium binding site 8 out of 14 in the Structure of the Chaperonin GP146 From the Bacteriophage El (Pseudomonas Aeruginosa) in Complex with Atpgammas


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 8 of Structure of the Chaperonin GP146 From the Bacteriophage El (Pseudomonas Aeruginosa) in Complex with Atpgammas within 5.0Å range:
probe atom residue distance (Å) B Occ
H:K602

b:97.5
occ:1.00
O1A H:AGS603 2.6 0.6 1.0
O2A H:AGS603 2.9 0.4 1.0
PA H:AGS603 3.1 1.0 1.0
O3A H:AGS603 4.0 0.9 1.0
O H:THR30 4.1 64.8 1.0
S1G H:AGS603 4.2 0.2 1.0
N H:GLY32 4.3 92.5 1.0
O3B H:AGS603 4.3 0.7 1.0
NZ H:LYS50 4.5 0.3 1.0
O H:LYS50 4.6 0.2 1.0
O5' H:AGS603 4.6 0.5 1.0
O H:GLY32 4.6 0.8 1.0
PB H:AGS603 4.9 0.2 1.0
CA H:GLY32 4.9 97.6 1.0
C H:GLY32 4.9 0.5 1.0
PG H:AGS603 4.9 0.1 1.0

Potassium binding site 9 out of 14 in 6tmx

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Potassium binding site 9 out of 14 in the Structure of the Chaperonin GP146 From the Bacteriophage El (Pseudomonas Aeruginosa) in Complex with Atpgammas


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 9 of Structure of the Chaperonin GP146 From the Bacteriophage El (Pseudomonas Aeruginosa) in Complex with Atpgammas within 5.0Å range:
probe atom residue distance (Å) B Occ
I:K602

b:0.6
occ:1.00
O1A I:AGS603 2.6 0.8 1.0
O2A I:AGS603 2.8 0.1 1.0
PA I:AGS603 3.1 0.5 1.0
O3A I:AGS603 4.0 0.2 1.0
O I:THR30 4.2 64.0 1.0
S1G I:AGS603 4.2 0.4 1.0
N I:GLY32 4.2 91.7 1.0
O3B I:AGS603 4.3 0.3 1.0
NZ I:LYS50 4.5 0.9 1.0
O5' I:AGS603 4.5 0.7 1.0
O I:LYS50 4.6 0.2 1.0
O I:GLY32 4.6 0.9 1.0
PB I:AGS603 4.9 0.2 1.0
CA I:GLY32 4.9 97.9 1.0
C I:GLY32 4.9 0.1 1.0
PG I:AGS603 4.9 0.4 1.0
CA I:MET31 5.0 80.9 1.0

Potassium binding site 10 out of 14 in 6tmx

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Potassium binding site 10 out of 14 in the Structure of the Chaperonin GP146 From the Bacteriophage El (Pseudomonas Aeruginosa) in Complex with Atpgammas


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 10 of Structure of the Chaperonin GP146 From the Bacteriophage El (Pseudomonas Aeruginosa) in Complex with Atpgammas within 5.0Å range:
probe atom residue distance (Å) B Occ
J:K602

b:0.4
occ:1.00
O1A J:AGS603 2.6 0.5 1.0
O2A J:AGS603 2.9 0.6 1.0
PA J:AGS603 3.1 0.3 1.0
O3A J:AGS603 4.0 0.5 1.0
O J:THR30 4.2 66.0 1.0
S1G J:AGS603 4.2 0.3 1.0
O3B J:AGS603 4.3 0.6 1.0
N J:GLY32 4.3 93.7 1.0
NZ J:LYS50 4.6 0.1 1.0
O5' J:AGS603 4.6 0.0 1.0
O J:LYS50 4.6 0.5 1.0
O J:GLY32 4.7 0.3 1.0
PB J:AGS603 4.9 0.1 1.0
PG J:AGS603 4.9 0.3 1.0
CA J:GLY32 4.9 98.1 1.0
C J:GLY32 4.9 0.7 1.0

Reference:

A.Bracher, S.S.Paul, H.Wang, N.Wischnewski, F.U.Hartl, M.Hayer-Hartl. Structure and Conformational Cycle of A Bacteriophage-Encoded Chaperonin Plos One 2020.
ISSN: ESSN 1932-6203
Page generated: Mon Aug 12 17:40:45 2024

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