Potassium in PDB 6tmx: Structure of the Chaperonin GP146 From the Bacteriophage El (Pseudomonas Aeruginosa) in Complex with Atpgammas
Other elements in 6tmx:
The structure of Structure of the Chaperonin GP146 From the Bacteriophage El (Pseudomonas Aeruginosa) in Complex with Atpgammas also contains other interesting chemical elements:
Potassium Binding Sites:
Pages:
>>> Page 1 <<<
Page 2, Binding sites: 11 -
14;
Binding sites:
The binding sites of Potassium atom in the Structure of the Chaperonin GP146 From the Bacteriophage El (Pseudomonas Aeruginosa) in Complex with Atpgammas
(pdb code 6tmx). This binding sites where shown within
5.0 Angstroms radius around Potassium atom.
In total 14 binding sites of Potassium where determined in the
Structure of the Chaperonin GP146 From the Bacteriophage El (Pseudomonas Aeruginosa) in Complex with Atpgammas, PDB code: 6tmx:
Jump to Potassium binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
9;
10;
Potassium binding site 1 out
of 14 in 6tmx
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Potassium Binding Sites List in 6tmx
Potassium binding site 1 out
of 14 in the Structure of the Chaperonin GP146 From the Bacteriophage El (Pseudomonas Aeruginosa) in Complex with Atpgammas
Mono view
Stereo pair view
|
A full contact list of Potassium with other atoms in the K binding
site number 1 of Structure of the Chaperonin GP146 From the Bacteriophage El (Pseudomonas Aeruginosa) in Complex with Atpgammas within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:K602
b:1.0
occ:1.00
|
O1A
|
A:AGS603
|
2.6
|
0.6
|
1.0
|
O2A
|
A:AGS603
|
2.9
|
0.3
|
1.0
|
PA
|
A:AGS603
|
3.1
|
0.7
|
1.0
|
O3A
|
A:AGS603
|
4.0
|
0.8
|
1.0
|
O
|
A:THR30
|
4.2
|
65.9
|
1.0
|
S1G
|
A:AGS603
|
4.2
|
0.7
|
1.0
|
N
|
A:GLY32
|
4.3
|
93.8
|
1.0
|
O3B
|
A:AGS603
|
4.3
|
0.4
|
1.0
|
NZ
|
A:LYS50
|
4.5
|
0.6
|
1.0
|
O
|
A:LYS50
|
4.6
|
0.4
|
1.0
|
O5'
|
A:AGS603
|
4.6
|
0.5
|
1.0
|
O
|
A:GLY32
|
4.7
|
0.9
|
1.0
|
PB
|
A:AGS603
|
4.9
|
0.2
|
1.0
|
PG
|
A:AGS603
|
4.9
|
0.7
|
1.0
|
CA
|
A:GLY32
|
4.9
|
98.5
|
1.0
|
C
|
A:GLY32
|
4.9
|
0.0
|
1.0
|
|
Potassium binding site 2 out
of 14 in 6tmx
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Potassium Binding Sites List in 6tmx
Potassium binding site 2 out
of 14 in the Structure of the Chaperonin GP146 From the Bacteriophage El (Pseudomonas Aeruginosa) in Complex with Atpgammas
Mono view
Stereo pair view
|
A full contact list of Potassium with other atoms in the K binding
site number 2 of Structure of the Chaperonin GP146 From the Bacteriophage El (Pseudomonas Aeruginosa) in Complex with Atpgammas within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:K602
b:0.9
occ:1.00
|
O1A
|
B:AGS603
|
2.6
|
0.5
|
1.0
|
O2A
|
B:AGS603
|
2.9
|
0.2
|
1.0
|
PA
|
B:AGS603
|
3.1
|
0.8
|
1.0
|
O3A
|
B:AGS603
|
4.0
|
0.2
|
1.0
|
O
|
B:THR30
|
4.2
|
66.3
|
1.0
|
S1G
|
B:AGS603
|
4.2
|
0.0
|
1.0
|
N
|
B:GLY32
|
4.3
|
96.7
|
1.0
|
O3B
|
B:AGS603
|
4.3
|
0.0
|
1.0
|
NZ
|
B:LYS50
|
4.5
|
0.5
|
1.0
|
O5'
|
B:AGS603
|
4.5
|
0.1
|
1.0
|
O
|
B:LYS50
|
4.6
|
0.1
|
1.0
|
O
|
B:GLY32
|
4.6
|
0.6
|
1.0
|
PB
|
B:AGS603
|
4.9
|
0.4
|
1.0
|
CA
|
B:GLY32
|
4.9
|
0.6
|
1.0
|
C
|
B:GLY32
|
4.9
|
0.9
|
1.0
|
PG
|
B:AGS603
|
4.9
|
0.1
|
1.0
|
|
Potassium binding site 3 out
of 14 in 6tmx
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Potassium Binding Sites List in 6tmx
Potassium binding site 3 out
of 14 in the Structure of the Chaperonin GP146 From the Bacteriophage El (Pseudomonas Aeruginosa) in Complex with Atpgammas
Mono view
Stereo pair view
|
A full contact list of Potassium with other atoms in the K binding
site number 3 of Structure of the Chaperonin GP146 From the Bacteriophage El (Pseudomonas Aeruginosa) in Complex with Atpgammas within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:K602
b:0.2
occ:1.00
|
O1A
|
C:AGS603
|
2.6
|
0.7
|
1.0
|
O2A
|
C:AGS603
|
2.9
|
0.9
|
1.0
|
PA
|
C:AGS603
|
3.1
|
0.9
|
1.0
|
O3A
|
C:AGS603
|
4.0
|
0.4
|
1.0
|
O
|
C:THR30
|
4.2
|
67.3
|
1.0
|
S1G
|
C:AGS603
|
4.2
|
0.5
|
1.0
|
N
|
C:GLY32
|
4.3
|
92.4
|
1.0
|
O3B
|
C:AGS603
|
4.3
|
0.1
|
1.0
|
NZ
|
C:LYS50
|
4.5
|
0.7
|
1.0
|
O
|
C:LYS50
|
4.6
|
0.3
|
1.0
|
O5'
|
C:AGS603
|
4.6
|
0.5
|
1.0
|
O
|
C:GLY32
|
4.7
|
0.1
|
1.0
|
PB
|
C:AGS603
|
4.9
|
0.3
|
1.0
|
PG
|
C:AGS603
|
4.9
|
1.0
|
1.0
|
CA
|
C:GLY32
|
4.9
|
96.8
|
1.0
|
C
|
C:GLY32
|
4.9
|
0.1
|
1.0
|
|
Potassium binding site 4 out
of 14 in 6tmx
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Potassium Binding Sites List in 6tmx
Potassium binding site 4 out
of 14 in the Structure of the Chaperonin GP146 From the Bacteriophage El (Pseudomonas Aeruginosa) in Complex with Atpgammas
Mono view
Stereo pair view
|
A full contact list of Potassium with other atoms in the K binding
site number 4 of Structure of the Chaperonin GP146 From the Bacteriophage El (Pseudomonas Aeruginosa) in Complex with Atpgammas within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:K602
b:0.8
occ:1.00
|
O1A
|
D:AGS603
|
2.6
|
0.6
|
1.0
|
O2A
|
D:AGS603
|
2.9
|
0.2
|
1.0
|
PA
|
D:AGS603
|
3.1
|
0.3
|
1.0
|
O3A
|
D:AGS603
|
4.0
|
0.5
|
1.0
|
O
|
D:THR30
|
4.2
|
64.3
|
1.0
|
S1G
|
D:AGS603
|
4.2
|
0.7
|
1.0
|
N
|
D:GLY32
|
4.3
|
91.3
|
1.0
|
O3B
|
D:AGS603
|
4.3
|
0.8
|
1.0
|
NZ
|
D:LYS50
|
4.5
|
0.7
|
1.0
|
O5'
|
D:AGS603
|
4.6
|
1.0
|
1.0
|
O
|
D:LYS50
|
4.6
|
0.6
|
1.0
|
O
|
D:GLY32
|
4.7
|
0.1
|
1.0
|
PB
|
D:AGS603
|
4.9
|
0.5
|
1.0
|
PG
|
D:AGS603
|
4.9
|
0.5
|
1.0
|
CA
|
D:GLY32
|
4.9
|
96.7
|
1.0
|
C
|
D:GLY32
|
4.9
|
0.6
|
1.0
|
|
Potassium binding site 5 out
of 14 in 6tmx
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Potassium Binding Sites List in 6tmx
Potassium binding site 5 out
of 14 in the Structure of the Chaperonin GP146 From the Bacteriophage El (Pseudomonas Aeruginosa) in Complex with Atpgammas
Mono view
Stereo pair view
|
A full contact list of Potassium with other atoms in the K binding
site number 5 of Structure of the Chaperonin GP146 From the Bacteriophage El (Pseudomonas Aeruginosa) in Complex with Atpgammas within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
E:K602
b:0.5
occ:1.00
|
O1A
|
E:AGS603
|
2.7
|
1.0
|
1.0
|
O2A
|
E:AGS603
|
2.9
|
0.4
|
1.0
|
PA
|
E:AGS603
|
3.2
|
0.9
|
1.0
|
O3A
|
E:AGS603
|
4.0
|
0.4
|
1.0
|
O
|
E:THR30
|
4.1
|
67.2
|
1.0
|
S1G
|
E:AGS603
|
4.2
|
0.6
|
1.0
|
N
|
E:GLY32
|
4.3
|
92.5
|
1.0
|
O3B
|
E:AGS603
|
4.3
|
0.1
|
1.0
|
NZ
|
E:LYS50
|
4.5
|
0.3
|
1.0
|
O
|
E:LYS50
|
4.5
|
0.4
|
1.0
|
O5'
|
E:AGS603
|
4.6
|
0.3
|
1.0
|
O
|
E:GLY32
|
4.6
|
0.2
|
1.0
|
PB
|
E:AGS603
|
4.9
|
0.4
|
1.0
|
CA
|
E:GLY32
|
4.9
|
96.7
|
1.0
|
C
|
E:GLY32
|
4.9
|
0.1
|
1.0
|
PG
|
E:AGS603
|
4.9
|
0.5
|
1.0
|
|
Potassium binding site 6 out
of 14 in 6tmx
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Potassium Binding Sites List in 6tmx
Potassium binding site 6 out
of 14 in the Structure of the Chaperonin GP146 From the Bacteriophage El (Pseudomonas Aeruginosa) in Complex with Atpgammas
Mono view
Stereo pair view
|
A full contact list of Potassium with other atoms in the K binding
site number 6 of Structure of the Chaperonin GP146 From the Bacteriophage El (Pseudomonas Aeruginosa) in Complex with Atpgammas within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
F:K602
b:0.9
occ:1.00
|
O1A
|
F:AGS603
|
2.6
|
0.0
|
1.0
|
O2A
|
F:AGS603
|
2.9
|
0.2
|
1.0
|
PA
|
F:AGS603
|
3.1
|
0.4
|
1.0
|
O3A
|
F:AGS603
|
4.0
|
0.2
|
1.0
|
O
|
F:THR30
|
4.1
|
66.3
|
1.0
|
S1G
|
F:AGS603
|
4.2
|
0.8
|
1.0
|
N
|
F:GLY32
|
4.2
|
92.9
|
1.0
|
O3B
|
F:AGS603
|
4.3
|
0.7
|
1.0
|
NZ
|
F:LYS50
|
4.5
|
0.7
|
1.0
|
O5'
|
F:AGS603
|
4.6
|
0.2
|
1.0
|
O
|
F:LYS50
|
4.6
|
0.8
|
1.0
|
O
|
F:GLY32
|
4.6
|
0.1
|
1.0
|
PB
|
F:AGS603
|
4.9
|
0.2
|
1.0
|
CA
|
F:GLY32
|
4.9
|
98.4
|
1.0
|
C
|
F:GLY32
|
4.9
|
0.1
|
1.0
|
PG
|
F:AGS603
|
4.9
|
0.3
|
1.0
|
CA
|
F:MET31
|
5.0
|
81.8
|
1.0
|
|
Potassium binding site 7 out
of 14 in 6tmx
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Potassium Binding Sites List in 6tmx
Potassium binding site 7 out
of 14 in the Structure of the Chaperonin GP146 From the Bacteriophage El (Pseudomonas Aeruginosa) in Complex with Atpgammas
Mono view
Stereo pair view
|
A full contact list of Potassium with other atoms in the K binding
site number 7 of Structure of the Chaperonin GP146 From the Bacteriophage El (Pseudomonas Aeruginosa) in Complex with Atpgammas within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
G:K602
b:0.9
occ:1.00
|
O1A
|
G:AGS603
|
2.6
|
0.8
|
1.0
|
O2A
|
G:AGS603
|
2.9
|
0.9
|
1.0
|
PA
|
G:AGS603
|
3.1
|
0.4
|
1.0
|
O3A
|
G:AGS603
|
4.0
|
0.8
|
1.0
|
O
|
G:THR30
|
4.2
|
65.4
|
1.0
|
S1G
|
G:AGS603
|
4.2
|
0.6
|
1.0
|
N
|
G:GLY32
|
4.3
|
92.0
|
1.0
|
O3B
|
G:AGS603
|
4.3
|
0.5
|
1.0
|
NZ
|
G:LYS50
|
4.5
|
0.7
|
1.0
|
O5'
|
G:AGS603
|
4.6
|
0.7
|
1.0
|
O
|
G:LYS50
|
4.6
|
0.3
|
1.0
|
O
|
G:GLY32
|
4.7
|
0.2
|
1.0
|
PB
|
G:AGS603
|
4.9
|
0.7
|
1.0
|
PG
|
G:AGS603
|
4.9
|
0.6
|
1.0
|
CA
|
G:GLY32
|
4.9
|
96.5
|
1.0
|
C
|
G:GLY32
|
4.9
|
0.2
|
1.0
|
|
Potassium binding site 8 out
of 14 in 6tmx
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Potassium Binding Sites List in 6tmx
Potassium binding site 8 out
of 14 in the Structure of the Chaperonin GP146 From the Bacteriophage El (Pseudomonas Aeruginosa) in Complex with Atpgammas
Mono view
Stereo pair view
|
A full contact list of Potassium with other atoms in the K binding
site number 8 of Structure of the Chaperonin GP146 From the Bacteriophage El (Pseudomonas Aeruginosa) in Complex with Atpgammas within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
H:K602
b:97.5
occ:1.00
|
O1A
|
H:AGS603
|
2.6
|
0.6
|
1.0
|
O2A
|
H:AGS603
|
2.9
|
0.4
|
1.0
|
PA
|
H:AGS603
|
3.1
|
1.0
|
1.0
|
O3A
|
H:AGS603
|
4.0
|
0.9
|
1.0
|
O
|
H:THR30
|
4.1
|
64.8
|
1.0
|
S1G
|
H:AGS603
|
4.2
|
0.2
|
1.0
|
N
|
H:GLY32
|
4.3
|
92.5
|
1.0
|
O3B
|
H:AGS603
|
4.3
|
0.7
|
1.0
|
NZ
|
H:LYS50
|
4.5
|
0.3
|
1.0
|
O
|
H:LYS50
|
4.6
|
0.2
|
1.0
|
O5'
|
H:AGS603
|
4.6
|
0.5
|
1.0
|
O
|
H:GLY32
|
4.6
|
0.8
|
1.0
|
PB
|
H:AGS603
|
4.9
|
0.2
|
1.0
|
CA
|
H:GLY32
|
4.9
|
97.6
|
1.0
|
C
|
H:GLY32
|
4.9
|
0.5
|
1.0
|
PG
|
H:AGS603
|
4.9
|
0.1
|
1.0
|
|
Potassium binding site 9 out
of 14 in 6tmx
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Potassium Binding Sites List in 6tmx
Potassium binding site 9 out
of 14 in the Structure of the Chaperonin GP146 From the Bacteriophage El (Pseudomonas Aeruginosa) in Complex with Atpgammas
Mono view
Stereo pair view
|
A full contact list of Potassium with other atoms in the K binding
site number 9 of Structure of the Chaperonin GP146 From the Bacteriophage El (Pseudomonas Aeruginosa) in Complex with Atpgammas within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
I:K602
b:0.6
occ:1.00
|
O1A
|
I:AGS603
|
2.6
|
0.8
|
1.0
|
O2A
|
I:AGS603
|
2.8
|
0.1
|
1.0
|
PA
|
I:AGS603
|
3.1
|
0.5
|
1.0
|
O3A
|
I:AGS603
|
4.0
|
0.2
|
1.0
|
O
|
I:THR30
|
4.2
|
64.0
|
1.0
|
S1G
|
I:AGS603
|
4.2
|
0.4
|
1.0
|
N
|
I:GLY32
|
4.2
|
91.7
|
1.0
|
O3B
|
I:AGS603
|
4.3
|
0.3
|
1.0
|
NZ
|
I:LYS50
|
4.5
|
0.9
|
1.0
|
O5'
|
I:AGS603
|
4.5
|
0.7
|
1.0
|
O
|
I:LYS50
|
4.6
|
0.2
|
1.0
|
O
|
I:GLY32
|
4.6
|
0.9
|
1.0
|
PB
|
I:AGS603
|
4.9
|
0.2
|
1.0
|
CA
|
I:GLY32
|
4.9
|
97.9
|
1.0
|
C
|
I:GLY32
|
4.9
|
0.1
|
1.0
|
PG
|
I:AGS603
|
4.9
|
0.4
|
1.0
|
CA
|
I:MET31
|
5.0
|
80.9
|
1.0
|
|
Potassium binding site 10 out
of 14 in 6tmx
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Potassium Binding Sites List in 6tmx
Potassium binding site 10 out
of 14 in the Structure of the Chaperonin GP146 From the Bacteriophage El (Pseudomonas Aeruginosa) in Complex with Atpgammas
Mono view
Stereo pair view
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A full contact list of Potassium with other atoms in the K binding
site number 10 of Structure of the Chaperonin GP146 From the Bacteriophage El (Pseudomonas Aeruginosa) in Complex with Atpgammas within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
J:K602
b:0.4
occ:1.00
|
O1A
|
J:AGS603
|
2.6
|
0.5
|
1.0
|
O2A
|
J:AGS603
|
2.9
|
0.6
|
1.0
|
PA
|
J:AGS603
|
3.1
|
0.3
|
1.0
|
O3A
|
J:AGS603
|
4.0
|
0.5
|
1.0
|
O
|
J:THR30
|
4.2
|
66.0
|
1.0
|
S1G
|
J:AGS603
|
4.2
|
0.3
|
1.0
|
O3B
|
J:AGS603
|
4.3
|
0.6
|
1.0
|
N
|
J:GLY32
|
4.3
|
93.7
|
1.0
|
NZ
|
J:LYS50
|
4.6
|
0.1
|
1.0
|
O5'
|
J:AGS603
|
4.6
|
0.0
|
1.0
|
O
|
J:LYS50
|
4.6
|
0.5
|
1.0
|
O
|
J:GLY32
|
4.7
|
0.3
|
1.0
|
PB
|
J:AGS603
|
4.9
|
0.1
|
1.0
|
PG
|
J:AGS603
|
4.9
|
0.3
|
1.0
|
CA
|
J:GLY32
|
4.9
|
98.1
|
1.0
|
C
|
J:GLY32
|
4.9
|
0.7
|
1.0
|
|
Reference:
A.Bracher,
S.S.Paul,
H.Wang,
N.Wischnewski,
F.U.Hartl,
M.Hayer-Hartl.
Structure and Conformational Cycle of A Bacteriophage-Encoded Chaperonin Plos One 2020.
ISSN: ESSN 1932-6203
Page generated: Mon Aug 12 17:40:45 2024
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