Potassium in PDB 6sj6: Cryo-Em Structure of 50S-Rsfs Complex From Staphylococcus Aureus

The structure of Cryo-Em Structure of 50S-Rsfs Complex From Staphylococcus Aureus also contains other interesting chemical elements:

Magnesium

(Mg)

56 atoms

The binding sites of Potassium atom in the Cryo-Em Structure of 50S-Rsfs Complex From Staphylococcus Aureus (pdb code 6sj6). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total 3 binding sites of Potassium where determined in the Cryo-Em Structure of 50S-Rsfs Complex From Staphylococcus Aureus, PDB code: 6sj6:
Jump to Potassium binding site number: 1; 2; 3;

Potassium binding site 1 out of 3 in the Cryo-Em Structure of 50S-Rsfs Complex From Staphylococcus Aureus


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of Cryo-Em Structure of 50S-Rsfs Complex From Staphylococcus Aureus within 5.0Å range: probe atom residue distance (Å) B Occ A:K3057 b:26.1 occ:1.00 OP1 A:C1714 2.7 13.1 1.0 OP2 A:U1715 2.8 14.9 1.0 OP2 A:G2577 4.0 35.4 1.0 P A:U1715 4.0 14.9 1.0 OP2 A:G2576 4.1 26.8 1.0 P A:C1714 4.2 13.1 1.0 O3' A:C1714 4.5 13.1 1.0 OP1 A:U1715 4.7 14.9 1.0 C5' A:G2576 4.7 26.8 1.0 O3' A:A1713 4.9 14.8 1.0 O5' A:C1714 4.9 13.1 1.0

Potassium binding site 2 out of 3 in the Cryo-Em Structure of 50S-Rsfs Complex From Staphylococcus Aureus


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 2 of Cryo-Em Structure of 50S-Rsfs Complex From Staphylococcus Aureus within 5.0Å range: probe atom residue distance (Å) B Occ A:K3058 b:9.2 occ:1.00 O6 A:G707 4.1 17.4 1.0 N7 A:G707 4.2 17.4 1.0 O4 A:U637 4.5 17.8 1.0 C6 A:G707 4.9 17.4 1.0 C5 A:G707 4.9 17.4 1.0 N6 A:A636 4.9 15.7 1.0 O4 A:U709 5.0 14.9 1.0

Potassium binding site 3 out of 3 in the Cryo-Em Structure of 50S-Rsfs Complex From Staphylococcus Aureus


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 3 of Cryo-Em Structure of 50S-Rsfs Complex From Staphylococcus Aureus within 5.0Å range: probe atom residue distance (Å) B Occ A:K3059 b:26.1 occ:1.00 OP2 A:A880 3.2 14.2 1.0 O6 A:G986 4.5 11.2 1.0 P A:A880 4.6 14.2 1.0 N7 A:A880 4.6 14.2 1.0 C8 A:A880 4.7 14.2 1.0 O5' A:A880 4.8 14.2 1.0 OP2 A:U879 4.8 12.7 1.0 O6 A:G881 5.0 14.2 1.0 O5' A:U879 5.0 12.7 1.0

I.Khusainov, B.Fatkhullin, S.Pellegrino, A.Bikmullin, W.T.Liu, A.Gabdulkhakov, D.Zeyer, N.Trachtmann, G.A.Sprenger, S.Validov, K.Usachev, G.Yusupova, M.Yusupov. Mechanism of Ribosome Shutdown By Rsfs in Staphylococcus Aureus Revealed By Integrative Structural Biology Approach Nat Commun 2020.
ISSN: ESSN 2041-1723
DOI: 10.1038/S41467-020-15517-0