Atomistry » Potassium » PDB 6pcd-6qm2 » 6q6r
Atomistry »
  Potassium »
    PDB 6pcd-6qm2 »
      6q6r »

Potassium in PDB 6q6r: Recognition of Different Base Tetrads By Rhau: X-Ray Crystal Structure of G4 Recognition Motif Bound to the 3-End Tetrad of A Dna G- Quadruplex

Enzymatic activity of Recognition of Different Base Tetrads By Rhau: X-Ray Crystal Structure of G4 Recognition Motif Bound to the 3-End Tetrad of A Dna G- Quadruplex

All present enzymatic activity of Recognition of Different Base Tetrads By Rhau: X-Ray Crystal Structure of G4 Recognition Motif Bound to the 3-End Tetrad of A Dna G- Quadruplex:
3.6.4.12; 3.6.4.13;

Protein crystallography data

The structure of Recognition of Different Base Tetrads By Rhau: X-Ray Crystal Structure of G4 Recognition Motif Bound to the 3-End Tetrad of A Dna G- Quadruplex, PDB code: 6q6r was solved by B.Heddi, V.V.Cheong, E.Schmitt, Y.Mechulam, A.T.Phan, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 60.60 / 1.50
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 56.390, 42.250, 61.404, 90.00, 99.30, 90.00
R / Rfree (%) 18.5 / 24.5

Potassium Binding Sites:

The binding sites of Potassium atom in the Recognition of Different Base Tetrads By Rhau: X-Ray Crystal Structure of G4 Recognition Motif Bound to the 3-End Tetrad of A Dna G- Quadruplex (pdb code 6q6r). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total 10 binding sites of Potassium where determined in the Recognition of Different Base Tetrads By Rhau: X-Ray Crystal Structure of G4 Recognition Motif Bound to the 3-End Tetrad of A Dna G- Quadruplex, PDB code: 6q6r:
Jump to Potassium binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Potassium binding site 1 out of 10 in 6q6r

Go back to Potassium Binding Sites List in 6q6r
Potassium binding site 1 out of 10 in the Recognition of Different Base Tetrads By Rhau: X-Ray Crystal Structure of G4 Recognition Motif Bound to the 3-End Tetrad of A Dna G- Quadruplex


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of Recognition of Different Base Tetrads By Rhau: X-Ray Crystal Structure of G4 Recognition Motif Bound to the 3-End Tetrad of A Dna G- Quadruplex within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K101

b:13.3
occ:1.00
O6 A:DG3 2.7 13.2 1.0
O6 A:DG7 2.7 13.9 1.0
O6 A:DG15 2.7 15.2 1.0
O6 A:DG11 2.8 13.5 1.0
O6 A:DG10 2.9 14.8 1.0
O6 A:DG2 2.9 14.8 1.0
O6 A:DG6 2.9 15.0 1.0
O6 A:DG14 2.9 12.0 1.0
K A:K102 3.4 12.2 1.0
C6 A:DG7 3.6 14.7 1.0
C6 A:DG3 3.6 16.1 1.0
C6 A:DG10 3.7 12.9 1.0
C6 A:DG15 3.7 13.3 1.0
C6 A:DG11 3.7 13.7 1.0
C6 A:DG14 3.7 15.8 1.0
C6 A:DG2 3.8 13.1 1.0
C6 A:DG6 3.8 10.7 1.0
N1 A:DG3 3.9 11.8 1.0
N1 A:DG11 3.9 14.0 1.0
N1 A:DG7 4.0 14.1 1.0
N1 A:DG15 4.0 15.1 1.0
N1 A:DG10 4.0 12.3 1.0
CA E:GLY11 4.0 16.6 1.0
N1 A:DG14 4.1 16.8 1.0
N1 A:DG6 4.1 15.1 1.0
N1 A:DG2 4.1 11.6 1.0
C5 A:DG10 4.8 12.4 1.0
N E:GLY11 4.8 18.9 1.0
C5 A:DG7 4.9 11.9 1.0
C5 A:DG2 4.9 13.5 1.0
C5 A:DG15 4.9 14.2 1.0
C5 A:DG14 5.0 15.7 1.0
C5 A:DG3 5.0 13.2 1.0
C5 A:DG6 5.0 10.6 1.0
C5 A:DG11 5.0 13.8 1.0

Potassium binding site 2 out of 10 in 6q6r

Go back to Potassium Binding Sites List in 6q6r
Potassium binding site 2 out of 10 in the Recognition of Different Base Tetrads By Rhau: X-Ray Crystal Structure of G4 Recognition Motif Bound to the 3-End Tetrad of A Dna G- Quadruplex


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 2 of Recognition of Different Base Tetrads By Rhau: X-Ray Crystal Structure of G4 Recognition Motif Bound to the 3-End Tetrad of A Dna G- Quadruplex within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K102

b:12.2
occ:1.00
O6 A:DG10 2.7 14.8 1.0
O6 A:DG13 2.7 12.3 1.0
O6 A:DG1 2.7 12.8 1.0
O6 A:DG2 2.8 14.8 1.0
O6 A:DG6 2.8 15.0 1.0
O6 A:DG14 2.8 12.0 1.0
O6 A:DG5 2.8 12.9 1.0
O6 A:DG9 2.8 13.9 1.0
K B:K103 3.3 12.8 1.0
K A:K101 3.4 13.3 1.0
C6 A:DG6 3.6 10.7 1.0
C6 A:DG10 3.7 12.9 1.0
C6 A:DG9 3.7 10.3 1.0
C6 A:DG13 3.7 13.4 1.0
C6 A:DG1 3.7 12.7 1.0
C6 A:DG5 3.7 11.4 1.0
C6 A:DG2 3.7 13.1 1.0
C6 A:DG14 3.7 15.8 1.0
N1 A:DG6 3.9 15.1 1.0
N1 A:DG1 4.0 14.3 1.0
N1 A:DG9 4.0 13.2 1.0
N1 A:DG10 4.0 12.3 1.0
N1 A:DG5 4.0 14.4 1.0
N1 A:DG14 4.0 16.8 1.0
N1 A:DG2 4.0 11.6 1.0
N1 A:DG13 4.0 14.7 1.0
C5 A:DG1 4.8 13.3 1.0
C5 A:DG10 4.9 12.4 1.0
C5 A:DG13 4.9 14.2 1.0
C5 A:DG6 4.9 10.6 1.0
C5 A:DG9 4.9 10.8 1.0
C5 A:DG5 4.9 14.8 1.0
C5 A:DG14 4.9 15.7 1.0
C5 A:DG2 4.9 13.5 1.0

Potassium binding site 3 out of 10 in 6q6r

Go back to Potassium Binding Sites List in 6q6r
Potassium binding site 3 out of 10 in the Recognition of Different Base Tetrads By Rhau: X-Ray Crystal Structure of G4 Recognition Motif Bound to the 3-End Tetrad of A Dna G- Quadruplex


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 3 of Recognition of Different Base Tetrads By Rhau: X-Ray Crystal Structure of G4 Recognition Motif Bound to the 3-End Tetrad of A Dna G- Quadruplex within 5.0Å range:
probe atom residue distance (Å) B Occ
B:K101

b:13.8
occ:1.00
O6 B:DG7 2.7 16.8 1.0
O6 B:DG15 2.7 15.8 1.0
O6 B:DG11 2.7 14.6 1.0
O6 B:DG3 2.8 14.6 1.0
O6 B:DG2 2.9 14.1 1.0
O6 B:DG14 2.9 14.6 1.0
O6 B:DG6 2.9 15.1 1.0
O6 B:DG10 3.0 13.6 1.0
K B:K102 3.4 13.2 1.0
C6 B:DG7 3.6 16.1 1.0
C6 B:DG11 3.7 14.7 1.0
C6 B:DG2 3.7 14.3 1.0
C6 B:DG15 3.7 14.0 1.0
C6 B:DG3 3.7 15.8 1.0
C6 B:DG6 3.7 14.0 1.0
C6 B:DG10 3.7 13.6 1.0
C6 B:DG14 3.8 17.3 1.0
N1 B:DG7 3.9 15.6 1.0
N1 B:DG11 3.9 17.3 1.0
N1 B:DG3 4.0 13.9 1.0
N1 B:DG15 4.0 14.5 1.0
N1 B:DG2 4.0 13.7 1.0
N1 B:DG10 4.0 13.5 1.0
CA F:GLY11 4.1 17.6 1.0
N1 B:DG14 4.1 14.4 1.0
N1 B:DG6 4.1 14.5 1.0
C5 B:DG2 4.9 16.8 1.0
N F:GLY11 4.9 21.3 1.0
C5 B:DG7 4.9 15.9 1.0
C5 B:DG10 4.9 15.9 1.0
C5 B:DG6 4.9 13.0 1.0
C5 B:DG11 4.9 15.8 1.0
C5 B:DG15 4.9 14.0 1.0
C5 B:DG14 4.9 12.7 1.0
C5 B:DG3 5.0 14.9 1.0

Potassium binding site 4 out of 10 in 6q6r

Go back to Potassium Binding Sites List in 6q6r
Potassium binding site 4 out of 10 in the Recognition of Different Base Tetrads By Rhau: X-Ray Crystal Structure of G4 Recognition Motif Bound to the 3-End Tetrad of A Dna G- Quadruplex


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 4 of Recognition of Different Base Tetrads By Rhau: X-Ray Crystal Structure of G4 Recognition Motif Bound to the 3-End Tetrad of A Dna G- Quadruplex within 5.0Å range:
probe atom residue distance (Å) B Occ
B:K102

b:13.2
occ:1.00
O6 B:DG6 2.7 15.1 1.0
O6 B:DG10 2.7 13.6 1.0
O6 B:DG14 2.7 14.6 1.0
O6 B:DG13 2.8 11.9 1.0
O6 B:DG1 2.8 13.4 0.5
O6 B:DG2 2.8 14.1 1.0
O6 B:DG1 2.8 13.7 0.5
O6 B:DG9 2.8 15.2 1.0
O6 B:DG5 2.8 13.1 1.0
K B:K103 3.3 12.8 1.0
K B:K101 3.4 13.8 1.0
C6 B:DG1 3.6 12.8 0.5
C6 B:DG6 3.6 14.0 1.0
C6 B:DG14 3.6 17.3 1.0
C6 B:DG13 3.6 13.0 1.0
C6 B:DG10 3.7 13.6 1.0
C6 B:DG1 3.7 13.0 0.5
C6 B:DG2 3.7 14.3 1.0
C6 B:DG9 3.7 15.0 1.0
C6 B:DG5 3.7 13.9 1.0
N1 B:DG6 3.9 14.5 1.0
N1 B:DG10 4.0 13.5 1.0
N1 B:DG2 4.0 13.7 1.0
N1 B:DG14 4.0 14.4 1.0
N1 B:DG1 4.0 12.4 0.5
N1 B:DG9 4.0 12.4 1.0
N1 B:DG1 4.0 12.4 0.5
N1 B:DG13 4.0 14.9 1.0
N1 B:DG5 4.1 13.7 1.0
C5 B:DG13 4.9 14.3 1.0
C5 B:DG1 4.9 17.8 0.5
C5 B:DG14 4.9 12.7 1.0
C5 B:DG10 4.9 15.9 1.0
C5 B:DG1 4.9 17.6 0.5
C5 B:DG6 4.9 13.0 1.0
C5 B:DG2 4.9 16.8 1.0
C5 B:DG5 4.9 16.7 1.0
C5 B:DG9 5.0 11.2 1.0

Potassium binding site 5 out of 10 in 6q6r

Go back to Potassium Binding Sites List in 6q6r
Potassium binding site 5 out of 10 in the Recognition of Different Base Tetrads By Rhau: X-Ray Crystal Structure of G4 Recognition Motif Bound to the 3-End Tetrad of A Dna G- Quadruplex


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 5 of Recognition of Different Base Tetrads By Rhau: X-Ray Crystal Structure of G4 Recognition Motif Bound to the 3-End Tetrad of A Dna G- Quadruplex within 5.0Å range:
probe atom residue distance (Å) B Occ
B:K103

b:12.8
occ:1.00
O6 B:DG1 2.7 13.4 0.5
O6 B:DG1 2.7 13.7 0.5
O6 A:DG1 2.7 12.8 1.0
O6 B:DG9 2.8 15.2 1.0
O6 A:DG9 2.8 13.9 1.0
O6 B:DG13 2.8 11.9 1.0
O6 B:DG5 2.8 13.1 1.0
O6 A:DG5 2.8 12.9 1.0
O6 A:DG13 2.9 12.3 1.0
K B:K102 3.3 13.2 1.0
K A:K102 3.3 12.2 1.0
C6 B:DG1 3.6 12.8 0.5
C6 A:DG1 3.6 12.7 1.0
C6 B:DG1 3.6 13.0 0.5
C6 B:DG9 3.7 15.0 1.0
C6 B:DG5 3.7 13.9 1.0
C6 A:DG13 3.7 13.4 1.0
C6 B:DG13 3.7 13.0 1.0
C6 A:DG9 3.7 10.3 1.0
C6 A:DG5 3.7 11.4 1.0
N1 B:DG1 3.9 12.4 0.5
N1 A:DG1 4.0 14.3 1.0
N1 B:DG1 4.0 12.4 0.5
N1 A:DG13 4.0 14.7 1.0
N1 B:DG5 4.0 13.7 1.0
N1 B:DG13 4.0 14.9 1.0
N1 A:DG5 4.0 14.4 1.0
N1 B:DG9 4.0 12.4 1.0
N1 A:DG9 4.0 13.2 1.0
C5 B:DG1 4.8 17.8 0.5
C5 B:DG1 4.8 17.6 0.5
C5 A:DG1 4.9 13.3 1.0
C5 A:DG13 4.9 14.2 1.0
C5 B:DG5 4.9 16.7 1.0
C5 A:DG9 4.9 10.8 1.0
C5 B:DG9 4.9 11.2 1.0
C5 B:DG13 4.9 14.3 1.0
C5 A:DG5 4.9 14.8 1.0

Potassium binding site 6 out of 10 in 6q6r

Go back to Potassium Binding Sites List in 6q6r
Potassium binding site 6 out of 10 in the Recognition of Different Base Tetrads By Rhau: X-Ray Crystal Structure of G4 Recognition Motif Bound to the 3-End Tetrad of A Dna G- Quadruplex


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 6 of Recognition of Different Base Tetrads By Rhau: X-Ray Crystal Structure of G4 Recognition Motif Bound to the 3-End Tetrad of A Dna G- Quadruplex within 5.0Å range:
probe atom residue distance (Å) B Occ
C:K101

b:9.4
occ:1.00
O6 C:DG11 2.7 8.4 1.0
O6 C:DG15 2.7 11.1 1.0
O6 C:DG7 2.7 10.5 1.0
O6 C:DG3 2.8 8.8 1.0
O6 C:DG6 2.9 9.5 1.0
O6 C:DG10 2.9 9.6 1.0
O6 C:DG14 2.9 9.5 1.0
O6 C:DG2 2.9 8.4 1.0
K C:K103 3.4 8.8 1.0
C6 C:DG11 3.6 10.7 1.0
C6 C:DG7 3.6 9.6 1.0
C6 C:DG3 3.7 8.8 1.0
C6 C:DG15 3.7 10.1 1.0
C6 C:DG2 3.7 7.8 1.0
C6 C:DG14 3.7 9.0 1.0
C6 C:DG10 3.7 8.5 1.0
C6 C:DG6 3.8 12.3 1.0
N1 C:DG11 3.9 9.9 1.0
N1 C:DG7 3.9 11.1 1.0
N1 C:DG3 3.9 9.3 1.0
N1 C:DG15 4.0 11.1 1.0
N1 C:DG10 4.0 8.6 1.0
N1 C:DG2 4.0 8.5 1.0
CA G:GLY11 4.0 15.6 1.0
N1 C:DG14 4.1 8.5 1.0
N1 C:DG6 4.1 10.0 1.0
N G:GLY11 4.8 14.6 1.0
C5 C:DG10 4.9 10.1 1.0
C5 C:DG2 4.9 9.4 1.0
C5 C:DG7 4.9 9.3 1.0
C5 C:DG11 4.9 9.7 1.0
C5 C:DG15 4.9 9.7 1.0
C5 C:DG14 4.9 10.5 1.0
C5 C:DG6 5.0 11.3 1.0
C5 C:DG3 5.0 10.8 1.0

Potassium binding site 7 out of 10 in 6q6r

Go back to Potassium Binding Sites List in 6q6r
Potassium binding site 7 out of 10 in the Recognition of Different Base Tetrads By Rhau: X-Ray Crystal Structure of G4 Recognition Motif Bound to the 3-End Tetrad of A Dna G- Quadruplex


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 7 of Recognition of Different Base Tetrads By Rhau: X-Ray Crystal Structure of G4 Recognition Motif Bound to the 3-End Tetrad of A Dna G- Quadruplex within 5.0Å range:
probe atom residue distance (Å) B Occ
C:K102

b:9.1
occ:1.00
O6 D:DG1 2.7 11.1 1.0
O6 C:DG9 2.7 9.4 1.0
O6 C:DG1 2.8 10.7 1.0
O6 C:DG13 2.8 8.4 1.0
O6 D:DG5 2.8 7.9 1.0
O6 C:DG5 2.8 8.7 1.0
O6 D:DG13 2.8 8.6 1.0
O6 D:DG9 2.9 9.6 1.0
K C:K103 3.3 8.8 1.0
K D:K102 3.3 8.8 1.0
C6 D:DG1 3.6 8.3 1.0
C6 C:DG1 3.7 8.1 1.0
C6 C:DG5 3.7 6.1 1.0
C6 C:DG13 3.7 7.5 1.0
C6 D:DG5 3.7 5.9 1.0
C6 C:DG9 3.7 8.2 1.0
C6 D:DG13 3.7 5.8 1.0
C6 D:DG9 3.7 8.4 1.0
N1 D:DG1 3.9 8.3 1.0
N1 C:DG5 3.9 8.6 1.0
N1 D:DG13 4.0 8.4 1.0
N1 D:DG5 4.0 9.9 1.0
N1 C:DG13 4.0 8.1 1.0
N1 C:DG1 4.0 8.5 1.0
N1 C:DG9 4.0 9.2 1.0
N1 D:DG9 4.1 9.2 1.0
C5 D:DG1 4.8 9.7 1.0
C5 C:DG13 4.8 6.9 1.0
C5 D:DG5 4.9 7.5 1.0
C5 C:DG1 4.9 9.6 1.0
C5 D:DG13 4.9 7.5 1.0
C5 C:DG9 4.9 10.5 1.0
C5 C:DG5 4.9 7.9 1.0
C5 D:DG9 4.9 9.4 1.0

Potassium binding site 8 out of 10 in 6q6r

Go back to Potassium Binding Sites List in 6q6r
Potassium binding site 8 out of 10 in the Recognition of Different Base Tetrads By Rhau: X-Ray Crystal Structure of G4 Recognition Motif Bound to the 3-End Tetrad of A Dna G- Quadruplex


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 8 of Recognition of Different Base Tetrads By Rhau: X-Ray Crystal Structure of G4 Recognition Motif Bound to the 3-End Tetrad of A Dna G- Quadruplex within 5.0Å range:
probe atom residue distance (Å) B Occ
C:K103

b:8.8
occ:1.00
O6 C:DG14 2.8 9.5 1.0
O6 C:DG10 2.8 9.6 1.0
O6 C:DG13 2.8 8.4 1.0
O6 C:DG5 2.8 8.7 1.0
O6 C:DG6 2.8 9.5 1.0
O6 C:DG2 2.8 8.4 1.0
O6 C:DG9 2.8 9.4 1.0
O6 C:DG1 2.8 10.7 1.0
K C:K102 3.3 9.1 1.0
K C:K101 3.4 9.4 1.0
C6 C:DG5 3.6 6.1 1.0
C6 C:DG10 3.6 8.5 1.0
C6 C:DG1 3.7 8.1 1.0
C6 C:DG14 3.7 9.0 1.0
C6 C:DG6 3.7 12.3 1.0
C6 C:DG9 3.7 8.2 1.0
C6 C:DG13 3.7 7.5 1.0
C6 C:DG2 3.7 7.8 1.0
N1 C:DG14 4.0 8.5 1.0
N1 C:DG5 4.0 8.6 1.0
N1 C:DG9 4.0 9.2 1.0
N1 C:DG10 4.0 8.6 1.0
N1 C:DG2 4.0 8.5 1.0
N1 C:DG1 4.0 8.5 1.0
N1 C:DG6 4.0 10.0 1.0
N1 C:DG13 4.0 8.1 1.0
C5 C:DG5 4.9 7.9 1.0
C5 C:DG1 4.9 9.6 1.0
C5 C:DG14 4.9 10.5 1.0
C5 C:DG10 4.9 10.1 1.0
C5 C:DG13 4.9 6.9 1.0
C5 C:DG9 4.9 10.5 1.0
C5 C:DG6 4.9 11.3 1.0
C5 C:DG2 4.9 9.4 1.0

Potassium binding site 9 out of 10 in 6q6r

Go back to Potassium Binding Sites List in 6q6r
Potassium binding site 9 out of 10 in the Recognition of Different Base Tetrads By Rhau: X-Ray Crystal Structure of G4 Recognition Motif Bound to the 3-End Tetrad of A Dna G- Quadruplex


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 9 of Recognition of Different Base Tetrads By Rhau: X-Ray Crystal Structure of G4 Recognition Motif Bound to the 3-End Tetrad of A Dna G- Quadruplex within 5.0Å range:
probe atom residue distance (Å) B Occ
D:K101

b:10.1
occ:1.00
O6 D:DG11 2.7 10.2 1.0
O6 D:DG7 2.7 11.2 1.0
O6 D:DG15 2.7 11.6 1.0
O6 D:DG3 2.7 10.5 1.0
O6 D:DG2 2.9 10.3 1.0
O6 D:DG14 2.9 10.0 1.0
O6 D:DG6 2.9 10.5 1.0
O6 D:DG10 2.9 11.2 1.0
K D:K102 3.5 8.8 1.0
C6 D:DG11 3.6 10.9 1.0
C6 D:DG7 3.6 11.4 1.0
C6 D:DG3 3.7 11.2 1.0
C6 D:DG2 3.7 8.9 1.0
C6 D:DG15 3.7 9.9 1.0
C6 D:DG10 3.7 9.6 1.0
C6 D:DG6 3.8 9.6 1.0
C6 D:DG14 3.8 10.4 1.0
N1 D:DG7 3.9 11.6 1.0
N1 D:DG11 3.9 11.4 1.0
CA H:GLY11 3.9 14.6 1.0
N1 D:DG3 3.9 10.7 1.0
N1 D:DG15 4.0 10.8 1.0
N1 D:DG10 4.0 9.8 1.0
N1 D:DG2 4.1 9.9 1.0
N1 D:DG6 4.1 11.1 1.0
N1 D:DG14 4.1 10.1 1.0
N H:GLY11 4.8 13.8 1.0
C5 D:DG7 4.9 10.9 1.0
C5 D:DG2 4.9 11.1 1.0
C5 D:DG10 4.9 10.1 1.0
C5 D:DG11 4.9 12.9 1.0
C5 D:DG14 5.0 9.7 1.0
C5 D:DG15 5.0 8.8 1.0
C5 D:DG3 5.0 13.8 1.0
C5 D:DG6 5.0 9.6 1.0

Potassium binding site 10 out of 10 in 6q6r

Go back to Potassium Binding Sites List in 6q6r
Potassium binding site 10 out of 10 in the Recognition of Different Base Tetrads By Rhau: X-Ray Crystal Structure of G4 Recognition Motif Bound to the 3-End Tetrad of A Dna G- Quadruplex


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 10 of Recognition of Different Base Tetrads By Rhau: X-Ray Crystal Structure of G4 Recognition Motif Bound to the 3-End Tetrad of A Dna G- Quadruplex within 5.0Å range:
probe atom residue distance (Å) B Occ
D:K102

b:8.8
occ:1.00
O6 D:DG2 2.7 10.3 1.0
O6 D:DG10 2.8 11.2 1.0
O6 D:DG6 2.8 10.5 1.0
O6 D:DG5 2.8 7.9 1.0
O6 D:DG1 2.8 11.1 1.0
O6 D:DG13 2.8 8.6 1.0
O6 D:DG14 2.8 10.0 1.0
O6 D:DG9 2.9 9.6 1.0
K C:K102 3.3 9.1 1.0
K D:K101 3.5 10.1 1.0
C6 D:DG1 3.6 8.3 1.0
C6 D:DG2 3.6 8.9 1.0
C6 D:DG10 3.6 9.6 1.0
C6 D:DG5 3.7 5.9 1.0
C6 D:DG6 3.7 9.6 1.0
C6 D:DG13 3.7 5.8 1.0
C6 D:DG14 3.7 10.4 1.0
C6 D:DG9 3.7 8.4 1.0
N1 D:DG6 3.9 11.1 1.0
N1 D:DG1 3.9 8.3 1.0
N1 D:DG2 3.9 9.9 1.0
N1 D:DG14 4.0 10.1 1.0
N1 D:DG9 4.0 9.2 1.0
N1 D:DG5 4.0 9.9 1.0
N1 D:DG10 4.0 9.8 1.0
N1 D:DG13 4.0 8.4 1.0
C5 D:DG5 4.8 7.5 1.0
C5 D:DG1 4.9 9.7 1.0
C5 D:DG6 4.9 9.6 1.0
C5 D:DG13 4.9 7.5 1.0
C5 D:DG2 4.9 11.1 1.0
C5 D:DG10 4.9 10.1 1.0
C5 D:DG14 4.9 9.7 1.0
C5 D:DG9 5.0 9.4 1.0

Reference:

B.Heddi, V.V.Cheong, E.Schmitt, Y.Mechulam, A.T.Phan. Recognition of Different Base Tetrads By Rhau (DHX36): X-Ray Crystal Structure of the G4 Recognition Motif Bound to the 3'-End Tetrad of A Dna G-Quadruplex. J.Struct.Biol. 07399 2019.
ISSN: ESSN 1095-8657
PubMed: 31586599
DOI: 10.1016/J.JSB.2019.10.001
Page generated: Mon Aug 12 17:17:12 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy