Potassium in PDB 6i9d: MLOK1 Consensus Structure From Single Particle Analysis of 2D Crystals

The binding sites of Potassium atom in the MLOK1 Consensus Structure From Single Particle Analysis of 2D Crystals (pdb code 6i9d). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total 2 binding sites of Potassium where determined in the MLOK1 Consensus Structure From Single Particle Analysis of 2D Crystals, PDB code: 6i9d:
Jump to Potassium binding site number: 1; 2;

Potassium binding site 1 out of 2 in the MLOK1 Consensus Structure From Single Particle Analysis of 2D Crystals


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of MLOK1 Consensus Structure From Single Particle Analysis of 2D Crystals within 5.0Å range: probe atom residue distance (Å) B Occ A:K401 b:32.4 occ:1.00 O A:GLY177 2.5 36.0 1.0 O C:GLY177 2.5 35.8 1.0 O B:GLY177 2.5 36.3 1.0 O D:GLY177 2.5 35.9 1.0 O D:TYR178 2.8 38.8 1.0 O C:TYR178 2.8 38.4 1.0 O B:TYR178 2.8 39.4 1.0 O A:TYR178 2.8 38.8 1.0 HA A:TYR178 3.5 38.8 1.0 HA C:TYR178 3.5 38.4 1.0 HA B:TYR178 3.5 39.4 1.0 HA D:TYR178 3.5 38.8 1.0 C C:TYR178 3.7 38.4 1.0 C D:TYR178 3.7 38.8 1.0 C A:GLY177 3.7 36.0 1.0 C A:TYR178 3.7 38.8 1.0 C B:TYR178 3.7 39.4 1.0 C C:GLY177 3.7 35.8 1.0 C B:GLY177 3.7 36.3 1.0 C D:GLY177 3.7 35.9 1.0 CA A:TYR178 4.0 38.8 1.0 CA C:TYR178 4.0 38.4 1.0 CA B:TYR178 4.0 39.4 1.0 CA D:TYR178 4.0 38.8 1.0 N A:TYR178 4.3 38.8 1.0 N C:TYR178 4.3 38.4 1.0 N B:TYR178 4.3 39.4 1.0 N D:TYR178 4.3 38.8 1.0 O A:THR176 4.5 39.6 1.0 O B:THR176 4.6 39.6 1.0 O C:THR176 4.6 39.4 1.0 O D:THR176 4.6 39.3 1.0 HA3 A:GLY177 4.7 36.0 1.0 HA3 C:GLY177 4.7 35.8 1.0 HA3 D:GLY177 4.7 35.9 1.0 HA3 B:GLY177 4.7 36.3 1.0 HA3 D:GLY179 4.8 37.5 1.0 HA3 C:GLY179 4.8 37.5 1.0 HA3 B:GLY179 4.8 38.3 1.0 HA3 A:GLY179 4.8 38.3 1.0 N D:GLY179 4.8 37.5 1.0 N C:GLY179 4.8 37.5 1.0 N A:GLY179 4.8 38.3 1.0 N B:GLY179 4.8 38.3 1.0 CA A:GLY177 4.8 36.0 1.0 CA C:GLY177 4.8 35.8 1.0 CA B:GLY177 4.8 36.3 1.0 CA D:GLY177 4.8 35.9 1.0

Potassium binding site 2 out of 2 in the MLOK1 Consensus Structure From Single Particle Analysis of 2D Crystals


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 2 of MLOK1 Consensus Structure From Single Particle Analysis of 2D Crystals within 5.0Å range: probe atom residue distance (Å) B Occ A:K402 b:29.4 occ:1.00 O D:THR176 2.8 39.3 1.0 O C:THR176 2.8 39.4 1.0 O A:THR175 2.8 43.9 1.0 O B:THR176 2.8 39.6 1.0 O A:THR176 2.8 39.6 1.0 O B:THR175 2.8 44.2 1.0 O C:THR175 2.8 43.8 1.0 O D:THR175 2.8 44.0 1.0 HA B:THR176 3.1 39.6 1.0 HA C:THR176 3.1 39.4 1.0 HA A:THR176 3.1 39.6 1.0 HA D:THR176 3.1 39.3 1.0 C D:THR176 3.6 39.3 1.0 C C:THR176 3.6 39.4 1.0 C B:THR176 3.6 39.6 1.0 C A:THR176 3.6 39.6 1.0 CA B:THR176 3.7 39.6 1.0 CA D:THR176 3.7 39.3 1.0 CA C:THR176 3.7 39.4 1.0 CA A:THR176 3.7 39.6 1.0 C A:THR175 3.9 43.9 1.0 C B:THR175 3.9 44.2 1.0 C C:THR175 3.9 43.8 1.0 C D:THR175 3.9 44.0 1.0 HG22 A:THR175 4.1 43.9 1.0 HG22 B:THR175 4.1 44.2 1.0 HG22 C:THR175 4.1 43.8 1.0 HG22 D:THR175 4.1 44.0 1.0 N A:THR176 4.3 39.6 1.0 N B:THR176 4.3 39.6 1.0 N D:THR176 4.3 39.3 1.0 N C:THR176 4.3 39.4 1.0 HG23 B:THR176 4.6 39.6 1.0 HG23 C:THR176 4.6 39.4 1.0 HG23 D:THR176 4.6 39.3 1.0 HG23 A:THR176 4.6 39.6 1.0 N D:GLY177 4.8 35.9 1.0 N C:GLY177 4.8 35.8 1.0 N B:GLY177 4.8 36.3 1.0 N A:GLY177 4.8 36.0 1.0 HA3 D:GLY177 4.9 35.9 1.0 HA3 C:GLY177 5.0 35.8 1.0 HA3 B:GLY177 5.0 36.3 1.0 HA3 A:GLY177 5.0 36.0 1.0

R.D.Righetto, N.Biyani, J.Kowal, M.Chami, H.Stahlberg. Retrieving High-Resolution Information From Disordered 2D Crystals By Single-Particle Cryo-Em. Nat Commun V. 10 1722 2019.
ISSN: ESSN 2041-1723
PubMed: 30979902
DOI: 10.1038/S41467-019-09661-5