Potassium »
PDB 6doj-6dxv »
6dp5 »
Potassium in PDB 6dp5: Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with An Rna/Dna Hybrid: Reaction in 40 Mm MG2+ and 75 Mm K+ For 40 S at 21 C
Enzymatic activity of Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with An Rna/Dna Hybrid: Reaction in 40 Mm MG2+ and 75 Mm K+ For 40 S at 21 C
All present enzymatic activity of Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with An Rna/Dna Hybrid: Reaction in 40 Mm MG2+ and 75 Mm K+ For 40 S at 21 C:
3.1.26.4;
3.1.26.4;
Protein crystallography data
The structure of Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with An Rna/Dna Hybrid: Reaction in 40 Mm MG2+ and 75 Mm K+ For 40 S at 21 C, PDB code: 6dp5
was solved by
N.L.Samara,
W.Yang,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 20.01 / 1.43 |
| Space group | C 1 2 1 |
| Cell size a, b, c (Å), α, β, γ (°) | 81.899, 37.505, 62.254, 90.00, 96.48, 90.00 |
| R / Rfree (%) | 15.3 / 17.6 |
Other elements in 6dp5:
The structure of Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with An Rna/Dna Hybrid: Reaction in 40 Mm MG2+ and 75 Mm K+ For 40 S at 21 C also contains other interesting chemical elements:
| Magnesium | (Mg) | 2 atoms |
| Iodine | (I) | 4 atoms |
Potassium Binding Sites:
The binding sites of Potassium atom in the Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with An Rna/Dna Hybrid: Reaction in 40 Mm MG2+ and 75 Mm K+ For 40 S at 21 C
(pdb code 6dp5). This binding sites where shown within
5.0 Angstroms radius around Potassium atom.
In total 3 binding sites of Potassium where determined in the Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with An Rna/Dna Hybrid: Reaction in 40 Mm MG2+ and 75 Mm K+ For 40 S at 21 C, PDB code: 6dp5:
Jump to Potassium binding site number: 1; 2; 3;
In total 3 binding sites of Potassium where determined in the Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with An Rna/Dna Hybrid: Reaction in 40 Mm MG2+ and 75 Mm K+ For 40 S at 21 C, PDB code: 6dp5:
Jump to Potassium binding site number: 1; 2; 3;
Potassium binding site 1 out of 3 in 6dp5
Go back to
Potassium Binding Sites List in 6dp5
Potassium binding site 1 out
of 3 in the Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with An Rna/Dna Hybrid: Reaction in 40 Mm MG2+ and 75 Mm K+ For 40 S at 21 C
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Potassium with other atoms in the K binding
site number 1 of Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with An Rna/Dna Hybrid: Reaction in 40 Mm MG2+ and 75 Mm K+ For 40 S at 21 C within 5.0Å range:
|
Potassium binding site 2 out of 3 in 6dp5
Go back to
Potassium Binding Sites List in 6dp5
Potassium binding site 2 out
of 3 in the Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with An Rna/Dna Hybrid: Reaction in 40 Mm MG2+ and 75 Mm K+ For 40 S at 21 C
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Potassium with other atoms in the K binding
site number 2 of Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with An Rna/Dna Hybrid: Reaction in 40 Mm MG2+ and 75 Mm K+ For 40 S at 21 C within 5.0Å range:
|
Potassium binding site 3 out of 3 in 6dp5
Go back to
Potassium Binding Sites List in 6dp5
Potassium binding site 3 out
of 3 in the Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with An Rna/Dna Hybrid: Reaction in 40 Mm MG2+ and 75 Mm K+ For 40 S at 21 C
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Potassium with other atoms in the K binding
site number 3 of Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with An Rna/Dna Hybrid: Reaction in 40 Mm MG2+ and 75 Mm K+ For 40 S at 21 C within 5.0Å range:
|
Reference:
N.L.Samara,
W.Yang.
Cation Trafficking Propels Rna Hydrolysis. Nat. Struct. Mol. Biol. V. 25 715 2018.
ISSN: ESSN 1545-9985
PubMed: 30076410
DOI: 10.1038/S41594-018-0099-4
Page generated: Mon Aug 12 15:51:43 2024
ISSN: ESSN 1545-9985
PubMed: 30076410
DOI: 10.1038/S41594-018-0099-4
Last articles
Zn in 9JPJZn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
