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Potassium in PDB 5uky: Dhp Domain of Phor of M. Tuberculosis - Native Data

Enzymatic activity of Dhp Domain of Phor of M. Tuberculosis - Native Data

All present enzymatic activity of Dhp Domain of Phor of M. Tuberculosis - Native Data:
2.7.13.3;

Protein crystallography data

The structure of Dhp Domain of Phor of M. Tuberculosis - Native Data, PDB code: 5uky was solved by S.Wang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 44.24 / 2.02
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 23.250, 74.534, 44.539, 90.00, 96.64, 90.00
R / Rfree (%) 17.1 / 21.7

Potassium Binding Sites:

The binding sites of Potassium atom in the Dhp Domain of Phor of M. Tuberculosis - Native Data (pdb code 5uky). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total only one binding site of Potassium was determined in the Dhp Domain of Phor of M. Tuberculosis - Native Data, PDB code: 5uky:

Potassium binding site 1 out of 1 in 5uky

Go back to Potassium Binding Sites List in 5uky
Potassium binding site 1 out of 1 in the Dhp Domain of Phor of M. Tuberculosis - Native Data


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of Dhp Domain of Phor of M. Tuberculosis - Native Data within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K401

b:41.0
occ:1.00
O2 A:PG4403 2.7 40.2 1.0
O1 A:PG4403 2.8 47.1 1.0
O3 A:PG4403 2.8 42.3 1.0
OXT A:LEU310 3.0 45.0 1.0
O5 A:PG4403 3.0 55.6 1.0
O4 A:PG4403 3.1 55.5 1.0
C2 A:PG4403 3.6 44.1 1.0
C3 A:PG4403 3.6 42.6 1.0
C4 A:PG4403 3.7 44.0 1.0
C6 A:PG4403 3.7 52.4 1.0
C1 A:PG4403 3.7 45.1 1.0
NH2 B:ARG251 3.7 45.9 1.0
C A:LEU310 3.8 45.3 1.0
C5 A:PG4403 3.8 49.5 1.0
C7 A:PG4403 3.9 58.7 1.0
C8 A:PG4403 4.0 58.3 1.0
O A:LEU310 4.1 45.6 1.0
NH1 B:ARG251 4.2 47.0 1.0
CZ B:ARG251 4.4 41.0 1.0
CE A:MET250 4.4 37.1 1.0
O A:LEU307 4.9 30.5 1.0
CA A:LEU310 5.0 39.2 1.0

Reference:

D.Xing, M.B.Ryndak, L.Wang, I.Kolesnikova, I.Smith, S.Wang. Asymmetric Structure of the Dimerization Domain of Phor, A Sensor Kinase Important For the Virulence of Mycobacterium Tuberculosis. Acs Omega V. 2 3509 2017.
ISSN: ESSN 2470-1343
PubMed: 28782049
DOI: 10.1021/ACSOMEGA.7B00612
Page generated: Mon Aug 12 14:41:50 2024

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