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Potassium in PDB 5pa3: Humanized Comt in Complex with 8-Hydroxy-6-[2-(Methoxymethyl)Phenyl]- 3H-Quinazolin-4-One

Enzymatic activity of Humanized Comt in Complex with 8-Hydroxy-6-[2-(Methoxymethyl)Phenyl]- 3H-Quinazolin-4-One

All present enzymatic activity of Humanized Comt in Complex with 8-Hydroxy-6-[2-(Methoxymethyl)Phenyl]- 3H-Quinazolin-4-One:
2.1.1.6;

Protein crystallography data

The structure of Humanized Comt in Complex with 8-Hydroxy-6-[2-(Methoxymethyl)Phenyl]- 3H-Quinazolin-4-One, PDB code: 5pa3 was solved by A.Ehler, C.Lerner, M.G.Rudolph, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 44.64 / 1.60
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 49.577, 53.503, 80.997, 90.00, 90.00, 90.00
R / Rfree (%) 17 / 20.8

Other elements in 5pa3:

The structure of Humanized Comt in Complex with 8-Hydroxy-6-[2-(Methoxymethyl)Phenyl]- 3H-Quinazolin-4-One also contains other interesting chemical elements:

Magnesium (Mg) 1 atom
Chlorine (Cl) 1 atom

Potassium Binding Sites:

The binding sites of Potassium atom in the Humanized Comt in Complex with 8-Hydroxy-6-[2-(Methoxymethyl)Phenyl]- 3H-Quinazolin-4-One (pdb code 5pa3). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total 2 binding sites of Potassium where determined in the Humanized Comt in Complex with 8-Hydroxy-6-[2-(Methoxymethyl)Phenyl]- 3H-Quinazolin-4-One, PDB code: 5pa3:
Jump to Potassium binding site number: 1; 2;

Potassium binding site 1 out of 2 in 5pa3

Go back to Potassium Binding Sites List in 5pa3
Potassium binding site 1 out of 2 in the Humanized Comt in Complex with 8-Hydroxy-6-[2-(Methoxymethyl)Phenyl]- 3H-Quinazolin-4-One


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of Humanized Comt in Complex with 8-Hydroxy-6-[2-(Methoxymethyl)Phenyl]- 3H-Quinazolin-4-One within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K305

b:21.4
occ:1.00
O A:PHE189 2.5 23.3 1.0
O A:SER186 2.6 17.8 1.0
O A:HOH577 2.7 35.3 1.0
O A:ARG184 2.8 20.6 1.0
O A:VAL183 2.8 16.6 1.0
O A:HOH564 2.8 19.8 1.0
C A:ARG184 3.4 18.3 1.0
C A:SER186 3.6 18.6 1.0
C A:PHE189 3.7 21.1 1.0
N A:SER186 3.8 18.0 1.0
CA A:ARG184 3.9 17.6 1.0
C A:VAL183 3.9 15.5 1.0
N A:GLY185 4.2 19.9 1.0
C A:GLY185 4.3 21.4 1.0
CA A:SER186 4.3 17.3 1.0
N A:ARG184 4.4 16.7 1.0
SG A:CYS191 4.4 20.7 1.0
CA A:PHE189 4.5 18.2 1.0
N A:SER187 4.6 19.2 1.0
CB A:PHE189 4.6 17.1 1.0
N A:PHE189 4.6 17.8 1.0
CA A:GLY185 4.6 19.1 1.0
N A:GLU190 4.7 20.1 1.0
CA A:GLU190 4.7 21.8 1.0
CA A:SER187 4.8 20.9 1.0
N A:CYS191 4.9 17.7 1.0
CB A:SER186 4.9 18.0 1.0
O A:GLY185 4.9 21.9 1.0

Potassium binding site 2 out of 2 in 5pa3

Go back to Potassium Binding Sites List in 5pa3
Potassium binding site 2 out of 2 in the Humanized Comt in Complex with 8-Hydroxy-6-[2-(Methoxymethyl)Phenyl]- 3H-Quinazolin-4-One


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 2 of Humanized Comt in Complex with 8-Hydroxy-6-[2-(Methoxymethyl)Phenyl]- 3H-Quinazolin-4-One within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K306

b:33.7
occ:1.00
O A:SER58 2.6 17.8 1.0
O A:HOH500 2.7 34.6 1.0
OG A:SER60 2.7 23.1 1.0
O A:HOH552 2.9 23.3 1.0
O A:HOH566 3.2 31.3 1.0
N A:SER60 3.6 17.5 1.0
C A:SER58 3.8 16.5 1.0
CB A:SER60 3.9 19.8 1.0
C A:PRO59 4.1 16.8 1.0
CA A:SER60 4.2 17.0 1.0
CA A:PRO59 4.4 16.9 1.0
O A:HOH505 4.6 26.7 1.0
N A:PRO59 4.6 16.7 1.0
CB A:SER58 4.6 17.4 0.5
O A:HOH429 4.6 24.9 1.0
OG A:SER58 4.6 19.8 0.5
CB A:SER58 4.7 18.5 0.5
O A:PRO59 4.7 16.5 1.0
O A:TYR57 4.7 18.1 1.0
CA A:SER58 4.9 16.8 0.5
CA A:SER58 4.9 17.3 0.5

Reference:

C.Lerner, R.Jakob-Roetne, K.Groebke-Zbinden, B.Buettelmann, M.G.Rudolph. Crystal Structure of A Comt Complex To Be Published.
Page generated: Mon Aug 12 14:23:20 2024

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