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Potassium in PDB 5ocn: Crystal Structure of the Forkhead Domain of Human FOXN1

Protein crystallography data

The structure of Crystal Structure of the Forkhead Domain of Human FOXN1, PDB code: 5ocn was solved by J.A.Newman, H.Aitkenhead, D.M.Pinkas, F.Von Delft, C.H.Arrowsmith, A.Edwwards, C.Bountra, O.Gileadi, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 43.91 / 2.70
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 42.141, 78.203, 263.479, 90.00, 90.00, 90.00
R / Rfree (%) 25.1 / 28.4

Potassium Binding Sites:

The binding sites of Potassium atom in the Crystal Structure of the Forkhead Domain of Human FOXN1 (pdb code 5ocn). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total 8 binding sites of Potassium where determined in the Crystal Structure of the Forkhead Domain of Human FOXN1, PDB code: 5ocn:
Jump to Potassium binding site number: 1; 2; 3; 4; 5; 6; 7; 8;

Potassium binding site 1 out of 8 in 5ocn

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Potassium binding site 1 out of 8 in the Crystal Structure of the Forkhead Domain of Human FOXN1


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of Crystal Structure of the Forkhead Domain of Human FOXN1 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K401

b:0.7
occ:1.00
 O A:LEU323 2.7 47.9 1.0
O A:HOH504 2.8 48.1 1.0
O A:PHE329 2.8 65.6 1.0
O A:ASN326 2.9 48.4 1.0
O A:SER324 3.0 51.1 1.0
C A:SER324 3.4 51.2 1.0
CA A:SER324 3.7 51.4 1.0
C A:LEU323 3.8 49.6 1.0
C A:ASN326 3.9 50.6 1.0
C A:PHE329 4.0 59.1 1.0
CZ3 A:TRP346 4.2 59.4 1.0
N A:SER324 4.2 50.6 1.0
N A:LEU325 4.3 51.9 1.0
CD C:LYS327 4.4 75.8 1.0
N A:ASN326 4.4 55.1 1.0
NZ C:LYS327 4.6 87.2 1.0
CA A:LYS327 4.6 58.4 1.0
C A:LEU325 4.6 54.3 1.0
N A:LYS327 4.7 51.0 1.0
CA A:ASN326 4.8 55.7 1.0
CH2 A:TRP346 4.9 61.2 1.0
CA A:PHE329 4.9 54.8 1.0
N A:GLU330 5.0 62.3 1.0
N A:PHE329 5.0 58.7 1.0
CA A:LEU325 5.0 55.8 1.0
OE1 A:GLU330 5.0 66.3 1.0
CA A:GLU330 5.0 64.4 1.0
CB A:SER324 5.0 56.3 1.0
CB A:PHE329 5.0 52.1 1.0

Potassium binding site 2 out of 8 in 5ocn

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Potassium binding site 2 out of 8 in the Crystal Structure of the Forkhead Domain of Human FOXN1


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 2 of Crystal Structure of the Forkhead Domain of Human FOXN1 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:K401

b:57.4
occ:1.00
 O B:PHE329 2.8 61.7 1.0
O B:LEU323 2.8 56.7 1.0
O B:ASN326 2.8 53.9 1.0
O B:HOH504 2.9 82.5 1.0
O B:HOH505 2.9 89.8 1.0
O B:SER324 3.1 59.3 1.0
C B:SER324 3.5 57.5 1.0
CA B:SER324 3.7 59.0 1.0
C B:ASN326 3.8 56.1 1.0
C B:LEU323 3.9 56.0 1.0
C B:PHE329 3.9 57.1 1.0
CZ3 B:TRP346 4.2 58.1 1.0
N B:SER324 4.3 56.5 1.0
CA B:LYS327 4.3 62.9 1.0
CD D:LYS327 4.4 61.2 1.0
N B:LYS327 4.4 60.2 1.0
N B:ASN326 4.4 55.2 1.0
N B:LEU325 4.5 54.5 1.0
NZ D:LYS327 4.5 64.9 1.0
OE1 B:GLU330 4.5 82.6 1.0
C B:LEU325 4.6 56.9 1.0
CA B:ASN326 4.7 55.9 1.0
CA B:PHE329 4.8 54.6 1.0
N B:PHE329 4.8 57.3 1.0
C B:LYS327 4.8 60.8 1.0
N B:GLU330 4.9 56.7 1.0
CH2 B:TRP346 4.9 58.0 1.0
CB B:PHE329 4.9 53.1 1.0
CA B:GLU330 4.9 60.3 1.0

Potassium binding site 3 out of 8 in 5ocn

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Potassium binding site 3 out of 8 in the Crystal Structure of the Forkhead Domain of Human FOXN1


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 3 of Crystal Structure of the Forkhead Domain of Human FOXN1 within 5.0Å range:
probe atom residue distance (Å) B Occ
C:K401

b:63.3
occ:1.00
 O C:PHE329 2.7 66.6 1.0
O C:LEU323 2.8 56.1 1.0
O C:ASN326 2.8 47.5 1.0
O C:SER324 3.1 57.8 1.0
C C:SER324 3.4 57.1 1.0
CA C:SER324 3.6 58.4 1.0
C C:ASN326 3.8 53.6 1.0
NZ A:LYS327 3.8 86.4 1.0
C C:LEU323 3.9 55.0 1.0
C C:PHE329 3.9 60.0 1.0
CE A:LYS327 4.0 81.1 1.0
N C:SER324 4.2 54.2 1.0
CZ3 C:TRP346 4.3 63.5 1.0
N C:LEU325 4.3 56.5 1.0
OE1 C:GLU330 4.4 73.8 1.0
N C:ASN326 4.4 52.5 1.0
CA C:LYS327 4.4 61.3 1.0
N C:LYS327 4.5 58.6 1.0
C C:LEU325 4.5 53.8 1.0
CA C:ASN326 4.7 55.5 1.0
CA C:PHE329 4.7 54.4 1.0
N C:PHE329 4.8 55.8 1.0
CB C:PHE329 4.8 52.5 1.0
O C:LEU325 4.9 51.7 1.0
N C:GLU330 4.9 61.7 1.0
CB C:SER324 4.9 64.8 1.0
CD A:LYS327 4.9 68.8 1.0
CA C:LEU325 5.0 57.0 1.0
C C:LYS327 5.0 62.2 1.0
CD C:GLU330 5.0 74.2 1.0
CH2 C:TRP346 5.0 62.8 1.0
CA C:GLU330 5.0 62.5 1.0

Potassium binding site 4 out of 8 in 5ocn

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Potassium binding site 4 out of 8 in the Crystal Structure of the Forkhead Domain of Human FOXN1


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 4 of Crystal Structure of the Forkhead Domain of Human FOXN1 within 5.0Å range:
probe atom residue distance (Å) B Occ
D:K401

b:69.6
occ:1.00
 O D:PHE329 2.7 72.8 1.0
O D:LEU323 2.9 60.0 1.0
O D:ASN326 2.9 55.6 1.0
O D:SER324 3.0 70.8 1.0
C D:SER324 3.6 70.1 1.0
CA D:SER324 3.9 74.3 1.0
C D:ASN326 3.9 53.9 1.0
C D:PHE329 3.9 68.4 1.0
C D:LEU323 4.0 63.9 1.0
CZ3 D:TRP346 4.0 74.0 1.0
OE1 D:GLU330 4.2 80.5 1.0
CD B:LYS327 4.4 77.1 1.0
N D:SER324 4.4 71.6 1.0
CA D:LYS327 4.5 53.1 1.0
N D:ASN326 4.5 60.2 1.0
N D:LEU325 4.5 65.0 1.0
N D:LYS327 4.6 50.8 1.0
CD D:GLU330 4.7 80.8 1.0
CH2 D:TRP346 4.7 75.6 1.0
C D:LEU325 4.7 59.2 1.0
NZ B:LYS327 4.8 86.3 1.0
CA D:PHE329 4.8 63.4 1.0
CA D:GLU330 4.8 75.3 1.0
N D:GLU330 4.8 71.9 1.0
CA D:ASN326 4.9 56.5 1.0
N D:PHE329 4.9 62.8 1.0
CB D:PHE329 4.9 61.8 1.0
CE3 D:TRP346 4.9 71.2 1.0

Potassium binding site 5 out of 8 in 5ocn

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Potassium binding site 5 out of 8 in the Crystal Structure of the Forkhead Domain of Human FOXN1


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 5 of Crystal Structure of the Forkhead Domain of Human FOXN1 within 5.0Å range:
probe atom residue distance (Å) B Occ
E:K401

b:74.7
occ:1.00
 O E:PHE329 2.7 85.9 1.0
O E:ASN326 2.8 79.6 1.0
O E:LEU323 3.3 74.8 1.0
O E:SER324 3.3 81.8 1.0
C E:SER324 3.8 83.8 1.0
C E:ASN326 3.9 82.8 1.0
C E:PHE329 3.9 81.8 1.0
CA E:SER324 4.1 88.0 1.0
CZ3 E:TRP346 4.3 80.7 1.0
C E:LEU323 4.4 88.0 1.0
CA E:LYS327 4.4 89.5 1.0
OE2 E:GLU330 4.5 96.8 1.0
CD F:LYS327 4.5 95.0 1.0
N E:ASN326 4.6 85.4 1.0
N E:LYS327 4.6 84.4 1.0
N E:LEU325 4.7 84.4 1.0
C E:LYS327 4.7 88.3 1.0
N E:SER324 4.7 90.7 1.0
C E:LEU325 4.7 85.5 1.0
O E:LYS327 4.8 83.2 1.0
CD E:GLU330 4.8 94.9 1.0
N E:PHE329 4.8 81.0 1.0
CA E:PHE329 4.8 78.4 1.0
N E:GLU330 4.8 84.1 1.0
CA E:GLU330 4.9 86.6 1.0
CA E:ASN326 4.9 85.7 1.0
CH2 E:TRP346 5.0 78.2 1.0
OE1 E:GLU330 5.0 97.5 1.0
NZ F:LYS327 5.0 0.0 1.0

Potassium binding site 6 out of 8 in 5ocn

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Potassium binding site 6 out of 8 in the Crystal Structure of the Forkhead Domain of Human FOXN1


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 6 of Crystal Structure of the Forkhead Domain of Human FOXN1 within 5.0Å range:
probe atom residue distance (Å) B Occ
F:K401

b:82.6
occ:1.00
 O F:PHE329 2.9 86.2 1.0
O F:LEU323 3.0 91.8 1.0
O F:ASN326 3.0 75.1 1.0
O F:SER324 3.1 94.9 1.0
C F:SER324 3.5 92.7 1.0
CA F:SER324 3.7 91.8 1.0
C F:ASN326 3.9 79.9 1.0
C F:LEU323 4.0 91.4 1.0
C F:PHE329 4.1 82.1 1.0
CE E:LYS327 4.1 0.7 1.0
NZ E:LYS327 4.2 0.4 1.0
CZ3 F:TRP346 4.2 82.2 1.0
N F:LEU325 4.3 91.3 1.0
N F:SER324 4.3 91.5 1.0
N F:ASN326 4.4 82.8 1.0
OE1 F:GLU330 4.5 92.5 1.0
CA F:LYS327 4.6 85.2 1.0
C F:LEU325 4.6 85.9 1.0
N F:LYS327 4.6 83.9 1.0
CA F:ASN326 4.8 81.8 1.0
CH2 F:TRP346 4.9 82.2 1.0
CD F:GLU330 4.9 91.2 1.0
CA F:LEU325 4.9 89.8 1.0
CA F:GLU330 4.9 84.2 1.0
N F:GLU330 5.0 82.6 1.0
CA F:PHE329 5.0 79.6 1.0
CD E:LYS327 5.0 94.8 1.0

Potassium binding site 7 out of 8 in 5ocn

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Potassium binding site 7 out of 8 in the Crystal Structure of the Forkhead Domain of Human FOXN1


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 7 of Crystal Structure of the Forkhead Domain of Human FOXN1 within 5.0Å range:
probe atom residue distance (Å) B Occ
G:K401

b:94.2
occ:1.00
 O G:PHE329 2.8 72.5 1.0
O G:ASN326 2.9 75.0 1.0
O G:LEU323 2.9 73.3 1.0
O G:SER324 2.9 75.2 1.0
C G:SER324 3.4 79.0 1.0
CA G:SER324 3.6 79.3 1.0
NZ H:LYS327 3.7 90.4 1.0
CE H:LYS327 3.8 86.5 1.0
C G:ASN326 3.9 77.7 1.0
C G:LEU323 3.9 76.1 1.0
C G:PHE329 4.0 68.4 1.0
CZ3 G:TRP346 4.0 85.0 1.0
N G:SER324 4.2 77.8 1.0
N G:ASN326 4.4 84.1 1.0
N G:LEU325 4.4 84.1 1.0
OE2 G:GLU330 4.6 80.5 1.0
CH2 G:TRP346 4.6 86.0 1.0
CA G:LYS327 4.7 70.6 1.0
N G:LYS327 4.7 74.7 1.0
C G:LEU325 4.7 87.7 1.0
CA G:ASN326 4.8 82.8 1.0
CD H:LYS327 4.8 82.4 1.0
CA G:PHE329 4.9 65.7 1.0
CB G:SER324 4.9 85.8 1.0
OE1 G:GLU330 4.9 78.7 1.0
CD G:GLU330 4.9 78.1 1.0
CB G:PHE329 4.9 67.1 1.0
N G:GLU330 4.9 71.8 1.0
CA G:GLU330 4.9 72.3 1.0

Potassium binding site 8 out of 8 in 5ocn

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Potassium binding site 8 out of 8 in the Crystal Structure of the Forkhead Domain of Human FOXN1


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 8 of Crystal Structure of the Forkhead Domain of Human FOXN1 within 5.0Å range:
probe atom residue distance (Å) B Occ
H:K401

b:80.1
occ:1.00
 O H:PHE329 2.7 81.5 1.0
O H:LEU323 2.8 71.8 1.0
O H:ASN326 2.8 71.8 1.0
O H:SER324 2.9 72.5 1.0
C H:SER324 3.4 73.6 1.0
CA H:SER324 3.6 76.4 1.0
C H:ASN326 3.8 74.3 1.0
C H:LEU323 3.9 74.2 1.0
C H:PHE329 3.9 76.4 1.0
NZ G:LYS327 4.1 90.5 1.0
CE G:LYS327 4.1 84.4 1.0
N H:SER324 4.2 76.1 1.0
CZ3 H:TRP346 4.2 74.9 1.0
N H:ASN326 4.4 76.2 1.0
N H:LEU325 4.5 72.4 1.0
OE2 H:GLU330 4.5 90.2 1.0
CA H:LYS327 4.5 79.5 1.0
N H:LYS327 4.6 75.5 1.0
CD H:GLU330 4.6 88.2 1.0
OE1 H:GLU330 4.8 90.3 1.0
CH2 H:TRP346 4.8 75.0 1.0
CA H:PHE329 4.8 77.1 1.0
C H:LEU325 4.8 73.2 1.0
CA H:ASN326 4.8 77.3 1.0
N H:GLU330 4.8 74.8 1.0
CB H:PHE329 4.8 77.1 1.0
N H:PHE329 4.8 81.9 1.0
CB H:SER324 4.8 81.5 1.0
CA H:GLU330 4.9 76.0 1.0
CD G:LYS327 4.9 77.1 1.0
C H:LYS327 5.0 84.5 1.0

Reference:

J.A.Newman, H.Aitkenhead, D.M.Pinkas, F.Von Delft, C.H.Arrowsmith, A.Edwwards, C.Bountra, O.Gileadi. Crystal Structure of the Forkhead Domain of Human FOXN1 To Be Published.
Page generated: Mon Aug 12 14:20:28 2024

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