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Potassium in PDB 5jgv: Spin-Labeled T4 Lysozyme Construct A73V1

Enzymatic activity of Spin-Labeled T4 Lysozyme Construct A73V1

All present enzymatic activity of Spin-Labeled T4 Lysozyme Construct A73V1:
3.2.1.17;

Protein crystallography data

The structure of Spin-Labeled T4 Lysozyme Construct A73V1, PDB code: 5jgv was solved by A.R.Balo, H.Feyrer, O.P.Ernst, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 34.95 / 1.73
Space group P 32 2 1
Cell size a, b, c (Å), α, β, γ (°) 59.187, 59.187, 95.582, 90.00, 90.00, 120.00
R / Rfree (%) 14.8 / 18.9

Other elements in 5jgv:

The structure of Spin-Labeled T4 Lysozyme Construct A73V1 also contains other interesting chemical elements:

Chlorine (Cl) 5 atoms

Potassium Binding Sites:

The binding sites of Potassium atom in the Spin-Labeled T4 Lysozyme Construct A73V1 (pdb code 5jgv). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total only one binding site of Potassium was determined in the Spin-Labeled T4 Lysozyme Construct A73V1, PDB code: 5jgv:

Potassium binding site 1 out of 1 in 5jgv

Go back to Potassium Binding Sites List in 5jgv
Potassium binding site 1 out of 1 in the Spin-Labeled T4 Lysozyme Construct A73V1


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of Spin-Labeled T4 Lysozyme Construct A73V1 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K203

b:27.1
occ:1.00
O A:HOH440 2.6 39.0 1.0
O A:HOH487 2.8 31.8 1.0
O A:GLU11 2.8 11.1 1.0
OE1 A:GLU11 2.9 14.1 1.0
OH A:TYR18 3.0 20.1 1.0
O A:HOH398 3.0 12.9 1.0
O A:HOH389 3.1 30.0 1.0
C A:GLU11 3.7 10.6 1.0
O A:HOH457 3.8 23.5 1.0
CA A:GLU11 3.8 8.6 1.0
O A:HOH313 3.9 26.2 1.0
CZ A:TYR18 3.9 16.9 1.0
CE2 A:TYR18 3.9 16.5 1.0
CB A:GLU11 4.1 8.6 1.0
CD A:GLU11 4.1 13.1 1.0
CA A:GLY30 4.3 8.6 1.0
N A:GLY30 4.6 9.8 1.0
CG A:GLU11 4.8 9.3 1.0
O A:HOH435 4.9 37.2 1.0
O A:ASP10 4.9 13.9 1.0
O A:HOH494 4.9 39.2 1.0
N A:GLY12 4.9 11.3 1.0

Reference:

A.R.Balo, H.Feyrer, O.P.Ernst. Toward Precise Interpretation of Deer-Based Distance Distributions: Insights From Structural Characterization of V1 Spin-Labeled Side Chains. Biochemistry V. 55 5256 2016.
ISSN: ISSN 1520-4995
PubMed: 27532325
DOI: 10.1021/ACS.BIOCHEM.6B00608
Page generated: Mon Dec 14 00:00:13 2020

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