Potassium in PDB 5jdt: Structure of Spin-Labelled T4 Lysozyme Mutant L118C-R1 at 100K

All present enzymatic activity of Structure of Spin-Labelled T4 Lysozyme Mutant L118C-R1 at 100K:
3.2.1.17;

The structure of Structure of Spin-Labelled T4 Lysozyme Mutant L118C-R1 at 100K, PDB code: 5jdt was solved by B.Loll, P.Consentius, U.Gohlke, R.Mueller, M.Kaupp, U.Heinemann, M.C.Wahl, T.Risse, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	17.76 / 1.00
Space group	P 32 2 1
Cell size a, b, c (Å), α, β, γ (°)	60.280, 60.280, 96.970, 90.00, 90.00, 120.00
R / Rfree (%)	11.5 / 13

The structure of Structure of Spin-Labelled T4 Lysozyme Mutant L118C-R1 at 100K also contains other interesting chemical elements:

Chlorine

(Cl)

3 atoms

The binding sites of Potassium atom in the Structure of Spin-Labelled T4 Lysozyme Mutant L118C-R1 at 100K (pdb code 5jdt). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total only one binding site of Potassium was determined in the Structure of Spin-Labelled T4 Lysozyme Mutant L118C-R1 at 100K, PDB code: 5jdt:

Potassium binding site 1 out of 1 in the Structure of Spin-Labelled T4 Lysozyme Mutant L118C-R1 at 100K


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of Structure of Spin-Labelled T4 Lysozyme Mutant L118C-R1 at 100K within 5.0Å range: probe atom residue distance (Å) B Occ A:K208 b:9.9 occ:0.56 HH A:TYR18 2.1 12.3 0.6 O A:HOH381 2.1 19.4 0.4 HH A:TYR18 2.6 9.1 0.4 OH A:TYR18 2.7 10.3 0.6 O A:HOH348 2.8 21.6 1.0 O A:HOH532 2.8 25.3 1.0 O A:HOH379 2.8 12.8 1.0 O A:GLU11 2.9 9.1 1.0 OE1 A:GLU11 3.1 9.8 1.0 HE2 A:TYR18 3.1 8.7 0.4 O A:HOH486 3.2 20.4 0.6 O A:HOH484 3.2 13.4 0.3 HA A:GLU11 3.2 9.1 1.0 OH A:TYR18 3.3 7.5 0.4 O A:HOH484 3.4 19.9 0.7 HE2 A:TYR18 3.7 12.1 0.6 C A:GLU11 3.7 7.9 1.0 O A:HOH305 3.8 8.5 0.6 CE2 A:TYR18 3.8 7.2 0.4 HB3 A:GLU11 3.8 9.5 1.0 HA2 A:GLY30 3.8 9.6 1.0 CA A:GLU11 3.9 7.6 1.0 CZ A:TYR18 3.9 9.7 0.6 CZ A:TYR18 4.0 7.2 0.4 CD A:GLU11 4.2 8.8 1.0 CE2 A:TYR18 4.2 10.1 0.6 O A:HOH305 4.2 9.7 0.4 HG21 A:THR26 4.3 8.8 1.0 CB A:GLU11 4.3 7.9 1.0 HB2 A:ASP20 4.4 10.0 1.0 H A:GLY30 4.4 8.8 1.0 HA3 A:GLY30 4.5 9.6 1.0 CA A:GLY30 4.5 8.0 1.0 HA A:ASP20 4.5 9.6 1.0 O A:HOH537 4.7 38.0 1.0 O A:HOH473 4.8 20.1 1.0 N A:GLY30 4.8 7.3 1.0 HG23 A:THR21 4.8 13.7 1.0 O A:ASP10 4.9 9.3 1.0 CG A:GLU11 4.9 8.3 1.0 HB3 A:ASP20 5.0 10.0 1.0 N A:GLY12 5.0 8.0 1.0

P.Consentius, U.Gohlke, B.Loll, C.Alings, R.Muller, U.Heinemann, M.Kaupp, M.Wahl, T.Risse. Tracking Transient Conformational States of T4 Lysozyme at Room Temperature Combining X-Ray Crystallography and Site-Directed Spin Labeling. J.Am.Chem.Soc. V. 138 12868 2016.
ISSN: ESSN 1520-5126
PubMed: 27673570
DOI: 10.1021/JACS.6B05507