Atomistry » Potassium » PDB 5irf-5koe » 5j9p
Atomistry »
  Potassium »
    PDB 5irf-5koe »
      5j9p »

Potassium in PDB 5j9p: Kcsa in Vitro

Protein crystallography data

The structure of Kcsa in Vitro, PDB code: 5j9p was solved by K.Matulef, F.I.Valiyaveetil, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 42.64 / 2.85
Space group I 4
Cell size a, b, c (Å), α, β, γ (°) 155.695, 155.695, 74.791, 90.00, 90.00, 90.00
R / Rfree (%) 21.7 / 26.6

Potassium Binding Sites:

The binding sites of Potassium atom in the Kcsa in Vitro (pdb code 5j9p). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total 6 binding sites of Potassium where determined in the Kcsa in Vitro, PDB code: 5j9p:
Jump to Potassium binding site number: 1; 2; 3; 4; 5; 6;

Potassium binding site 1 out of 6 in 5j9p

Go back to Potassium Binding Sites List in 5j9p
Potassium binding site 1 out of 6 in the Kcsa in Vitro


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of Kcsa in Vitro within 5.0Å range:
probe atom residue distance (Å) B Occ
C:K201

b:30.0
occ:0.25
O C:HOH307 4.0 45.1 1.0
K C:K202 4.2 30.0 0.2
O C:TYR78 4.2 33.7 1.0
CA C:GLY79 4.5 17.3 1.0
O C:GLY79 4.8 24.7 1.0
C C:GLY79 4.9 29.0 1.0

Potassium binding site 2 out of 6 in 5j9p

Go back to Potassium Binding Sites List in 5j9p
Potassium binding site 2 out of 6 in the Kcsa in Vitro


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 2 of Kcsa in Vitro within 5.0Å range:
probe atom residue distance (Å) B Occ
C:K202

b:30.0
occ:0.25
O C:TYR78 2.1 33.7 1.0
C C:TYR78 3.2 42.9 1.0
O C:GLY77 3.4 44.7 1.0
K C:K203 3.9 30.0 0.2
CA C:TYR78 4.0 25.7 1.0
N C:GLY79 4.1 33.6 1.0
K C:K201 4.2 30.0 0.2
CA C:GLY79 4.2 17.3 1.0
C C:GLY77 4.4 37.1 1.0
N C:TYR78 4.7 20.7 1.0

Potassium binding site 3 out of 6 in 5j9p

Go back to Potassium Binding Sites List in 5j9p
Potassium binding site 3 out of 6 in the Kcsa in Vitro


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 3 of Kcsa in Vitro within 5.0Å range:
probe atom residue distance (Å) B Occ
C:K203

b:30.0
occ:0.25
K C:K204 2.7 30.0 0.2
O C:VAL76 2.7 69.0 1.0
O C:GLY77 2.9 44.7 1.0
C C:GLY77 3.7 37.1 1.0
K C:K202 3.9 30.0 0.2
C C:VAL76 3.9 33.5 1.0
CA C:GLY77 4.3 41.6 1.0
N C:GLY77 4.6 25.3 1.0
N C:TYR78 4.6 20.7 1.0
O C:TYR78 4.8 33.7 1.0
CA C:TYR78 4.9 25.7 1.0
O C:THR75 5.0 63.1 1.0

Potassium binding site 4 out of 6 in 5j9p

Go back to Potassium Binding Sites List in 5j9p
Potassium binding site 4 out of 6 in the Kcsa in Vitro


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 4 of Kcsa in Vitro within 5.0Å range:
probe atom residue distance (Å) B Occ
C:K204

b:30.0
occ:0.25
O C:VAL76 2.6 69.0 1.0
K C:K203 2.7 30.0 0.2
O C:THR75 2.9 63.1 1.0
C C:VAL76 3.5 33.5 1.0
C C:THR75 4.0 30.8 1.0
CA C:VAL76 4.0 29.1 1.0
K C:K205 4.1 30.0 0.2
N C:VAL76 4.5 23.8 1.0
N C:GLY77 4.6 25.3 1.0
O C:GLY77 4.9 44.7 1.0

Potassium binding site 5 out of 6 in 5j9p

Go back to Potassium Binding Sites List in 5j9p
Potassium binding site 5 out of 6 in the Kcsa in Vitro


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 5 of Kcsa in Vitro within 5.0Å range:
probe atom residue distance (Å) B Occ
C:K205

b:30.0
occ:0.25
OG1 C:THR75 2.7 33.4 1.0
O C:THR75 3.2 63.1 1.0
CB C:THR75 3.5 38.5 1.0
C C:THR75 4.0 30.8 1.0
K C:K204 4.1 30.0 0.2
CA C:THR75 4.4 34.3 1.0
CG2 C:THR75 4.6 28.5 1.0
O C:THR74 4.8 39.8 1.0
N C:VAL76 5.0 23.8 1.0

Potassium binding site 6 out of 6 in 5j9p

Go back to Potassium Binding Sites List in 5j9p
Potassium binding site 6 out of 6 in the Kcsa in Vitro


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 6 of Kcsa in Vitro within 5.0Å range:
probe atom residue distance (Å) B Occ
C:K206

b:30.0
occ:0.25
O C:HOH306 3.6 39.6 1.0
O C:HOH303 4.0 31.8 1.0

Reference:

P.J.Focke, C.Hein, B.Hoffmann, K.Matulef, F.Bernhard, V.Dotsch, F.I.Valiyaveetil. Combining in Vitro Folding with Cell Free Protein Synthesis For Membrane Protein Expression. Biochemistry V. 55 4212 2016.
ISSN: ISSN 0006-2960
PubMed: 27384110
DOI: 10.1021/ACS.BIOCHEM.6B00488
Page generated: Mon Dec 14 00:00:01 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy