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Potassium in PDB 5j3b: Structure of Translation Elongation Factor P From Acinetobacter Baumannii

Protein crystallography data

The structure of Structure of Translation Elongation Factor P From Acinetobacter Baumannii, PDB code: 5j3b was solved by Seattle Structural Genomics Center For Infectious Disease (Ssgcid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 45.03 / 2.30
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 130.760, 52.230, 90.170, 90.00, 130.62, 90.00
R / Rfree (%) 19.3 / 23.7

Other elements in 5j3b:

The structure of Structure of Translation Elongation Factor P From Acinetobacter Baumannii also contains other interesting chemical elements:

Chlorine (Cl) 2 atoms

Potassium Binding Sites:

The binding sites of Potassium atom in the Structure of Translation Elongation Factor P From Acinetobacter Baumannii (pdb code 5j3b). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total only one binding site of Potassium was determined in the Structure of Translation Elongation Factor P From Acinetobacter Baumannii, PDB code: 5j3b:

Potassium binding site 1 out of 1 in 5j3b

Go back to Potassium Binding Sites List in 5j3b
Potassium binding site 1 out of 1 in the Structure of Translation Elongation Factor P From Acinetobacter Baumannii


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of Structure of Translation Elongation Factor P From Acinetobacter Baumannii within 5.0Å range:
probe atom residue distance (Å) B Occ
B:K200

b:65.4
occ:1.00
N B:PRO155 3.6 44.6 1.0
N A:PRO155 3.6 44.3 1.0
CD B:PRO155 3.7 55.6 1.0
C A:LYS154 3.7 51.2 1.0
C B:LYS154 3.8 51.1 1.0
CB A:ARG165 3.8 52.3 1.0
NH1 B:ARG165 3.9 0.8 1.0
CG B:ARG165 3.9 53.0 1.0
CD A:PRO155 4.0 46.9 1.0
CA A:PRO155 4.1 43.7 1.0
CA A:LYS154 4.1 56.2 1.0
CA B:LYS154 4.1 59.8 1.0
CD B:ARG165 4.2 68.4 1.0
O A:LYS154 4.2 46.0 1.0
CB B:ARG165 4.2 49.2 1.0
CA B:PRO155 4.2 48.1 1.0
CG B:PRO155 4.2 55.9 1.0
CB B:PRO155 4.3 49.2 1.0
N A:LYS154 4.3 68.9 1.0
CB A:PRO155 4.3 40.3 1.0
O B:LYS154 4.4 46.6 1.0
CA A:ARG165 4.4 41.9 1.0
N B:LYS154 4.4 72.3 1.0
CG A:PRO155 4.4 45.5 1.0
C A:GLY153 4.7 74.2 1.0
CZ B:ARG165 4.7 97.3 1.0
CA B:ARG165 4.7 41.5 1.0
C B:GLY153 4.8 71.1 1.0
O B:GLY153 4.8 66.3 1.0
NE B:ARG165 4.8 85.3 1.0
O A:GLY153 4.8 75.0 1.0

Reference:

J.Abendroth, P.S.Horanyi, D.D.Lorimer, T.E.Edwards. Structure of Translation Elongation Factor P From Acinetobacter Baumannii To Be Published.
Page generated: Sun Dec 13 23:59:58 2020

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