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Potassium in PDB 5fiy: Crystal Structure of Coiled Coil Domain of Pawr

Protein crystallography data

The structure of Crystal Structure of Coiled Coil Domain of Pawr, PDB code: 5fiy was solved by U.K.Tiruttani Subhramanyam, J.Kubicek, U.B.Eidhoff, J.Labahn, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 41.81 / 3.00
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 114.990, 114.990, 121.810, 90.00, 90.00, 90.00
R / Rfree (%) 24.5 / 29.4

Potassium Binding Sites:

Pages:

>>> Page 1 <<< Page 2, Binding sites: 11 - 18;

Binding sites:

The binding sites of Potassium atom in the Crystal Structure of Coiled Coil Domain of Pawr (pdb code 5fiy). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total 18 binding sites of Potassium where determined in the Crystal Structure of Coiled Coil Domain of Pawr, PDB code: 5fiy:
Jump to Potassium binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Potassium binding site 1 out of 18 in 5fiy

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Potassium binding site 1 out of 18 in the Crystal Structure of Coiled Coil Domain of Pawr


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of Crystal Structure of Coiled Coil Domain of Pawr within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K401

b:93.0
occ:1.00
CG A:ARG263 4.3 40.2 1.0
CD A:ARG263 4.5 30.9 1.0
NE A:ARG263 4.5 29.5 1.0
CD1 B:ILE264 4.6 51.7 1.0
CB A:ARG263 4.8 48.3 1.0
CG2 B:ILE264 4.8 24.2 1.0
CD2 A:LEU260 4.9 50.0 1.0

Potassium binding site 2 out of 18 in 5fiy

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Potassium binding site 2 out of 18 in the Crystal Structure of Coiled Coil Domain of Pawr


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 2 of Crystal Structure of Coiled Coil Domain of Pawr within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K402

b:73.8
occ:1.00
OE2 A:GLU277 3.5 50.0 1.0
ND2 B:ASN278 4.1 60.4 1.0
OD1 B:ASN278 4.1 81.5 1.0
CD A:GLU277 4.3 58.5 1.0
CG A:GLU277 4.4 54.8 1.0
CG B:ASN278 4.5 68.1 1.0
OG1 B:THR282 4.9 54.6 1.0

Potassium binding site 3 out of 18 in 5fiy

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Potassium binding site 3 out of 18 in the Crystal Structure of Coiled Coil Domain of Pawr


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 3 of Crystal Structure of Coiled Coil Domain of Pawr within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K403

b:69.4
occ:1.00
OE1 A:GLU270 4.4 30.3 1.0
NH1 A:ARG263 4.6 49.0 1.0
CD A:GLU270 4.7 39.7 1.0
CG A:GLU270 4.8 29.8 1.0
CB A:GLU270 4.9 21.4 1.0
CD2 A:LEU267 4.9 28.4 1.0

Potassium binding site 4 out of 18 in 5fiy

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Potassium binding site 4 out of 18 in the Crystal Structure of Coiled Coil Domain of Pawr


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 4 of Crystal Structure of Coiled Coil Domain of Pawr within 5.0Å range:
probe atom residue distance (Å) B Occ
B:K401

b:60.3
occ:1.00
CD2 B:LEU267 4.4 31.4 1.0
NH1 B:ARG263 4.5 39.2 1.0
OE1 B:GLU270 4.7 52.9 1.0
CB B:GLU270 5.0 33.7 1.0
CD B:GLU270 5.0 35.7 1.0
CG B:GLU270 5.0 28.1 1.0

Potassium binding site 5 out of 18 in 5fiy

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Potassium binding site 5 out of 18 in the Crystal Structure of Coiled Coil Domain of Pawr


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 5 of Crystal Structure of Coiled Coil Domain of Pawr within 5.0Å range:
probe atom residue distance (Å) B Occ
B:K402

b:0.2
occ:1.00
CG B:ARG263 4.1 28.5 1.0
NE B:ARG263 4.2 38.3 1.0
CD B:ARG263 4.2 40.8 1.0
CD1 A:ILE264 4.6 50.4 1.0
CG2 A:ILE264 4.6 23.3 1.0
CB B:ARG263 4.7 46.1 1.0
CD2 B:LEU260 4.8 52.7 1.0
CZ B:ARG263 4.9 44.7 1.0
OE2 A:GLU268 5.0 39.0 1.0

Potassium binding site 6 out of 18 in 5fiy

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Potassium binding site 6 out of 18 in the Crystal Structure of Coiled Coil Domain of Pawr


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 6 of Crystal Structure of Coiled Coil Domain of Pawr within 5.0Å range:
probe atom residue distance (Å) B Occ
B:K403

b:62.7
occ:1.00
OE2 B:GLU277 3.6 51.6 1.0
CD B:GLU277 4.4 63.3 1.0
CG B:GLU277 4.4 62.6 1.0

Potassium binding site 7 out of 18 in 5fiy

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Potassium binding site 7 out of 18 in the Crystal Structure of Coiled Coil Domain of Pawr


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 7 of Crystal Structure of Coiled Coil Domain of Pawr within 5.0Å range:
probe atom residue distance (Å) B Occ
C:K401

b:76.7
occ:1.00
OE1 C:GLU270 4.5 67.8 1.0
CD2 C:LEU267 4.6 42.9 1.0
NH1 C:ARG263 4.6 46.7 1.0
CD C:GLU270 4.8 64.2 1.0
CG C:GLU270 4.9 40.7 1.0
CB C:GLU270 4.9 35.5 1.0

Potassium binding site 8 out of 18 in 5fiy

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Potassium binding site 8 out of 18 in the Crystal Structure of Coiled Coil Domain of Pawr


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 8 of Crystal Structure of Coiled Coil Domain of Pawr within 5.0Å range:
probe atom residue distance (Å) B Occ
C:K402

b:0.7
occ:1.00
CG C:ARG263 4.4 71.5 1.0
NE C:ARG263 4.5 49.4 1.0
CD C:ARG263 4.5 63.5 1.0
CD2 C:LEU260 4.8 92.0 1.0
CB C:ARG263 4.9 61.5 1.0
CD1 D:ILE264 5.0 76.3 1.0

Potassium binding site 9 out of 18 in 5fiy

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Potassium binding site 9 out of 18 in the Crystal Structure of Coiled Coil Domain of Pawr


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 9 of Crystal Structure of Coiled Coil Domain of Pawr within 5.0Å range:
probe atom residue distance (Å) B Occ
C:K403

b:75.1
occ:1.00
OE2 C:GLU277 3.8 41.1 1.0
CD C:GLU277 4.5 52.4 1.0
CG C:GLU277 4.6 41.2 1.0

Potassium binding site 10 out of 18 in 5fiy

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Potassium binding site 10 out of 18 in the Crystal Structure of Coiled Coil Domain of Pawr


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 10 of Crystal Structure of Coiled Coil Domain of Pawr within 5.0Å range:
probe atom residue distance (Å) B Occ
C:K404

b:86.4
occ:1.00
ND2 C:ASN278 4.0 75.5 1.0
OD1 C:ASN278 4.3 82.8 1.0
O C:HOH2003 4.3 64.7 1.0
OE2 D:GLU277 4.5 66.3 1.0
CG C:ASN278 4.6 76.1 1.0
CG D:GLU277 5.0 56.2 1.0

Reference:

U.K.Tiruttani Subhramanyam, J.Kubicek, U.B.Eidhoff, J.Labahn. Structural Basis For the Regulatory Interactions of Proapoptotic Par-4. Cell Death Differ. V. 24 1540 2017.
ISSN: ISSN 1476-5403
PubMed: 28622290
DOI: 10.1038/CDD.2017.76
Page generated: Sun Dec 13 23:57:09 2020

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