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Potassium in PDB 5cbv: Human Cyclophilin D Complexed with Inhibitor

Protein crystallography data

The structure of Human Cyclophilin D Complexed with Inhibitor, PDB code: 5cbv was solved by R.P.Gibson, E.Shore, N.Kershaw, M.Awais, A.Javed, D.Latawiec, S.Pandalaneni, L.Wen, N.Berry, P.O'neill, R.Sutton, L.Y.Lian, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 38.20 / 1.80
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 57.430, 57.430, 113.040, 90.00, 90.00, 90.00
R / Rfree (%) 16.3 / 19.2

Potassium Binding Sites:

The binding sites of Potassium atom in the Human Cyclophilin D Complexed with Inhibitor (pdb code 5cbv). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total only one binding site of Potassium was determined in the Human Cyclophilin D Complexed with Inhibitor, PDB code: 5cbv:

Potassium binding site 1 out of 1 in 5cbv

Go back to Potassium Binding Sites List in 5cbv
Potassium binding site 1 out of 1 in the Human Cyclophilin D Complexed with Inhibitor


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of Human Cyclophilin D Complexed with Inhibitor within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K201

b:19.5
occ:0.50
O2 A:PGE204 2.7 27.8 1.0
O3 A:PGE204 2.8 26.1 1.0
O4 A:PGE204 3.2 36.6 1.0
O1 A:PGE204 3.3 28.2 1.0
C2 A:PGE204 3.6 28.5 1.0
C1 A:PGE204 3.6 30.2 1.0
C3 A:PGE204 3.6 30.4 1.0
C4 A:PGE204 3.7 29.2 1.0
C5 A:PGE204 3.8 29.6 1.0
C6 A:PGE204 3.9 32.9 1.0

Reference:

R.P.Gibson, E.Shore, N.Kershaw, M.Awais, A.Javed, D.Latawiec, S.Pandalaneni, L.Wen, N.Berry, P.O'neill, R.Sutton, L.Y.Lian. Human Cyclophilin D Complexed with Inhibitor To Be Published.
Page generated: Mon Aug 12 13:07:03 2024

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