Potassium in PDB 5c7y: Zhd-Intermediate Complex After Zhd Crystal Soaking in Zen For 9MIN

The structure of Zhd-Intermediate Complex After Zhd Crystal Soaking in Zen For 9MIN, PDB code: 5c7y was solved by X.-J.Hu, Q.Qi, W.-J.Yang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	47.86 / 1.75
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	74.690, 89.670, 113.200, 90.00, 90.00, 90.00
R / Rfree (%)	15.3 / 18.1

The binding sites of Potassium atom in the Zhd-Intermediate Complex After Zhd Crystal Soaking in Zen For 9MIN (pdb code 5c7y). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total 2 binding sites of Potassium where determined in the Zhd-Intermediate Complex After Zhd Crystal Soaking in Zen For 9MIN, PDB code: 5c7y:
Jump to Potassium binding site number: 1; 2;

Potassium binding site 1 out of 2 in the Zhd-Intermediate Complex After Zhd Crystal Soaking in Zen For 9MIN


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of Zhd-Intermediate Complex After Zhd Crystal Soaking in Zen For 9MIN within 5.0Å range: probe atom residue distance (Å) B Occ A:K305 b:23.7 occ:0.84 N A:ASP250 3.2 12.4 1.0 C A:HIS248 3.4 12.1 1.0 CB A:ASP250 3.4 17.1 1.0 CA A:HIS248 3.5 11.6 1.0 N A:VAL251 3.6 11.2 1.0 N A:PRO249 3.6 13.8 1.0 CA A:ASP250 3.8 14.2 1.0 O A:HIS248 3.8 12.5 1.0 CB A:HIS248 3.9 12.3 1.0 CG2 A:VAL251 3.9 14.3 1.0 CD A:PRO249 3.9 14.2 1.0 CG A:ASP250 4.0 26.4 1.0 C A:ASP250 4.2 12.9 1.0 C A:PRO249 4.3 11.9 1.0 OD1 A:ASP250 4.3 21.3 1.0 CB A:VAL251 4.5 12.2 1.0 CG A:PRO249 4.5 17.3 1.0 CA A:PRO249 4.5 10.9 1.0 CG A:HIS248 4.6 14.9 1.0 CA A:VAL251 4.6 13.8 1.0 OD2 A:ASP250 4.7 29.9 1.0 CD2 A:HIS248 4.7 16.1 1.0 N A:HIS248 4.8 11.1 1.0 O A:SER247 4.9 11.2 1.0

Potassium binding site 2 out of 2 in the Zhd-Intermediate Complex After Zhd Crystal Soaking in Zen For 9MIN


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 2 of Zhd-Intermediate Complex After Zhd Crystal Soaking in Zen For 9MIN within 5.0Å range: probe atom residue distance (Å) B Occ B:K305 b:22.7 occ:0.75 N B:ASP250 3.2 11.3 1.0 C B:HIS248 3.4 12.9 1.0 CB B:ASP250 3.4 15.2 1.0 CA B:HIS248 3.4 12.5 1.0 N B:VAL251 3.5 11.7 1.0 N B:PRO249 3.7 12.3 1.0 O B:HIS248 3.7 11.9 1.0 CA B:ASP250 3.8 10.8 1.0 CB B:HIS248 3.8 13.1 1.0 CG2 B:VAL251 3.9 15.2 1.0 CD B:PRO249 4.0 12.9 1.0 CG B:ASP250 4.0 27.4 1.0 C B:ASP250 4.2 10.8 1.0 C B:PRO249 4.3 11.5 1.0 OD1 B:ASP250 4.4 22.6 1.0 CB B:VAL251 4.4 12.6 1.0 CA B:PRO249 4.5 11.3 1.0 OD2 B:ASP250 4.5 29.8 1.0 CG B:HIS248 4.6 10.7 1.0 CG B:PRO249 4.6 17.1 1.0 CA B:VAL251 4.6 13.8 1.0 CD2 B:HIS248 4.6 15.5 1.0 N B:HIS248 4.8 11.6 1.0 O B:SER247 5.0 12.5 1.0

D.-M.Ming, Q.Qi, W.-J.Yang, K.-L.Sun, T.-Y.Xu, Q.Huang, X.-J.Hu, H.Lv. A Case Study of Lactonase Zhd To Be Published.