Atomistry » Potassium » PDB 5avx-5cbu » 5bki
Atomistry »
  Potassium »
    PDB 5avx-5cbu »
      5bki »

Potassium in PDB 5bki: Blocker-Free Closed Mthk Channel in Nanodisc

Other elements in 5bki:

The structure of Blocker-Free Closed Mthk Channel in Nanodisc also contains other interesting chemical elements:

Cadmium (Cd) 12 atoms

Potassium Binding Sites:

The binding sites of Potassium atom in the Blocker-Free Closed Mthk Channel in Nanodisc (pdb code 5bki). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total 5 binding sites of Potassium where determined in the Blocker-Free Closed Mthk Channel in Nanodisc, PDB code: 5bki:
Jump to Potassium binding site number: 1; 2; 3; 4; 5;

Potassium binding site 1 out of 5 in 5bki

Go back to Potassium Binding Sites List in 5bki
Potassium binding site 1 out of 5 in the Blocker-Free Closed Mthk Channel in Nanodisc


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of Blocker-Free Closed Mthk Channel in Nanodisc within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K403

b:32.1
occ:1.00
 OG1 E:THR59 2.9 38.0 1.0
OG1 C:THR59 2.9 38.0 1.0
OG1 G:THR59 2.9 38.0 1.0
OG1 A:THR59 2.9 38.0 1.0
O A:THR59 3.0 38.0 1.0
O C:THR59 3.0 38.0 1.0
O G:THR59 3.0 38.0 1.0
O E:THR59 3.0 38.0 1.0
CB G:THR59 3.6 38.0 1.0
CB C:THR59 3.6 38.0 1.0
CB E:THR59 3.6 38.0 1.0
CB A:THR59 3.6 38.0 1.0
K A:K404 3.7 33.3 1.0
C A:THR59 4.0 38.0 1.0
C C:THR59 4.0 38.0 1.0
C G:THR59 4.0 38.0 1.0
C E:THR59 4.0 38.0 1.0
CA A:THR59 4.4 38.0 1.0
CA C:THR59 4.4 38.0 1.0
CA G:THR59 4.4 38.0 1.0
CA E:THR59 4.4 38.0 1.0
CG2 E:THR59 4.7 38.0 1.0
CG2 G:THR59 4.7 38.0 1.0
CG2 C:THR59 4.7 38.0 1.0
CG2 A:THR59 4.8 38.0 1.0
O A:ALA58 4.9 40.4 1.0
O E:ALA58 4.9 40.4 1.0
O C:ALA58 5.0 40.4 1.0
O G:ALA58 5.0 40.4 1.0

Potassium binding site 2 out of 5 in 5bki

Go back to Potassium Binding Sites List in 5bki
Potassium binding site 2 out of 5 in the Blocker-Free Closed Mthk Channel in Nanodisc


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 2 of Blocker-Free Closed Mthk Channel in Nanodisc within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K404

b:33.3
occ:1.00
 O E:THR59 2.9 38.0 1.0
O A:VAL60 2.9 37.8 1.0
O G:THR59 2.9 38.0 1.0
O C:THR59 2.9 38.0 1.0
O A:THR59 2.9 38.0 1.0
O E:VAL60 2.9 37.8 1.0
O C:VAL60 2.9 37.8 1.0
O G:VAL60 2.9 37.8 1.0
K A:K405 3.1 36.5 1.0
K A:K403 3.7 32.1 1.0
C A:VAL60 3.7 37.8 1.0
C E:VAL60 3.8 37.8 1.0
C G:VAL60 3.8 37.8 1.0
C C:VAL60 3.8 37.8 1.0
C E:THR59 3.9 38.0 1.0
C G:THR59 3.9 38.0 1.0
C C:THR59 4.0 38.0 1.0
C A:THR59 4.0 38.0 1.0
CA A:VAL60 4.1 37.8 1.0
CA E:VAL60 4.1 37.8 1.0
CA C:VAL60 4.1 37.8 1.0
CA G:VAL60 4.1 37.8 1.0
N E:VAL60 4.5 37.8 1.0
N A:VAL60 4.5 37.8 1.0
N G:VAL60 4.5 37.8 1.0
N C:VAL60 4.5 37.8 1.0
N A:GLY61 4.8 41.3 1.0
N E:GLY61 4.8 41.3 1.0
N G:GLY61 4.8 41.3 1.0
N C:GLY61 4.9 41.3 1.0

Potassium binding site 3 out of 5 in 5bki

Go back to Potassium Binding Sites List in 5bki
Potassium binding site 3 out of 5 in the Blocker-Free Closed Mthk Channel in Nanodisc


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 3 of Blocker-Free Closed Mthk Channel in Nanodisc within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K405

b:36.5
occ:1.00
 O E:VAL60 2.8 37.8 1.0
O C:VAL60 2.9 37.8 1.0
O A:GLY61 2.9 41.3 1.0
O A:VAL60 2.9 37.8 1.0
O G:VAL60 2.9 37.8 1.0
O E:GLY61 2.9 41.3 1.0
O C:GLY61 2.9 41.3 1.0
O G:GLY61 2.9 41.3 1.0
K A:K404 3.1 33.3 1.0
K A:K406 3.7 37.9 1.0
C A:GLY61 3.8 41.3 1.0
C E:GLY61 3.8 41.3 1.0
C C:GLY61 3.8 41.3 1.0
C G:GLY61 3.8 41.3 1.0
C E:VAL60 4.0 37.8 1.0
C C:VAL60 4.0 37.8 1.0
C A:VAL60 4.0 37.8 1.0
C G:VAL60 4.0 37.8 1.0
CA E:GLY61 4.3 41.3 1.0
CA G:GLY61 4.3 41.3 1.0
CA C:GLY61 4.3 41.3 1.0
CA A:GLY61 4.3 41.3 1.0
N E:GLY61 4.6 41.3 1.0
N C:GLY61 4.7 41.3 1.0
N A:GLY61 4.7 41.3 1.0
N G:GLY61 4.7 41.3 1.0
N A:TYR62 4.9 46.5 1.0
N E:TYR62 4.9 46.5 1.0
N C:TYR62 4.9 46.5 1.0
N G:TYR62 4.9 46.5 1.0

Potassium binding site 4 out of 5 in 5bki

Go back to Potassium Binding Sites List in 5bki
Potassium binding site 4 out of 5 in the Blocker-Free Closed Mthk Channel in Nanodisc


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 4 of Blocker-Free Closed Mthk Channel in Nanodisc within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K406

b:37.9
occ:1.00
 O A:TYR62 2.9 46.5 1.0
O E:TYR62 2.9 46.5 1.0
O C:TYR62 2.9 46.5 1.0
O G:TYR62 2.9 46.5 1.0
O E:GLY61 3.4 41.3 1.0
O G:GLY61 3.4 41.3 1.0
O C:GLY61 3.4 41.3 1.0
O A:GLY61 3.4 41.3 1.0
C E:TYR62 3.6 46.5 1.0
C A:TYR62 3.6 46.5 1.0
C G:TYR62 3.7 46.5 1.0
C C:TYR62 3.7 46.5 1.0
K A:K405 3.7 36.5 1.0
CA E:TYR62 4.2 46.5 1.0
CA A:TYR62 4.3 46.5 1.0
CA C:TYR62 4.3 46.5 1.0
CA G:TYR62 4.3 46.5 1.0
N E:GLY63 4.4 52.3 1.0
N G:GLY63 4.4 52.3 1.0
N A:GLY63 4.4 52.3 1.0
C E:GLY61 4.4 41.3 1.0
N C:GLY63 4.4 52.3 1.0
C G:GLY61 4.5 41.3 1.0
C C:GLY61 4.5 41.3 1.0
C A:GLY61 4.5 41.3 1.0
CA G:GLY63 4.6 52.3 1.0
CA E:GLY63 4.6 52.3 1.0
CA A:GLY63 4.6 52.3 1.0
CA C:GLY63 4.6 52.3 1.0
N E:TYR62 4.9 46.5 1.0
N G:TYR62 4.9 46.5 1.0
N C:TYR62 4.9 46.5 1.0
N A:TYR62 4.9 46.5 1.0

Potassium binding site 5 out of 5 in 5bki

Go back to Potassium Binding Sites List in 5bki
Potassium binding site 5 out of 5 in the Blocker-Free Closed Mthk Channel in Nanodisc


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 5 of Blocker-Free Closed Mthk Channel in Nanodisc within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K407

b:56.9
occ:1.00
 CD1 C:LEU95 4.3 45.8 1.0
CD1 E:LEU95 4.3 45.8 1.0
CD1 G:LEU95 4.3 45.8 1.0
CD1 A:LEU95 4.3 45.8 1.0

Reference:

F.Chen, F.Emelie, S.Nattakan, W.A.Toby, M.N.Crina. Quaternary Ammonium Ions Block and Inactivate Closed Calcium-Activated Potassium Channels Via Membrane Fenestrations To Be Published.
Page generated: Wed Apr 5 09:37:48 2023

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy