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Potassium in PDB 5ah0: Structure of Lipase 1 From Pelosinus Fermentans

Protein crystallography data

The structure of Structure of Lipase 1 From Pelosinus Fermentans, PDB code: 5ah0 was solved by A.Hromic, K.Gruber, A.Biundo, D.Ribitsch, F.Quartinello, V.Perz, M.S.Arrell, F.Kalman, G.M.Guebitz, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.20 / 2.50
Space group P 41 21 2
Cell size a, b, c (Å), α, β, γ (°) 91.800, 91.800, 215.900, 90.00, 90.00, 90.00
R / Rfree (%) 19.4 / 24.3

Other elements in 5ah0:

The structure of Structure of Lipase 1 From Pelosinus Fermentans also contains other interesting chemical elements:

Zinc (Zn) 2 atoms

Potassium Binding Sites:

The binding sites of Potassium atom in the Structure of Lipase 1 From Pelosinus Fermentans (pdb code 5ah0). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total only one binding site of Potassium was determined in the Structure of Lipase 1 From Pelosinus Fermentans, PDB code: 5ah0:

Potassium binding site 1 out of 1 in 5ah0

Go back to Potassium Binding Sites List in 5ah0
Potassium binding site 1 out of 1 in the Structure of Lipase 1 From Pelosinus Fermentans


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of Structure of Lipase 1 From Pelosinus Fermentans within 5.0Å range:
probe atom residue distance (Å) B Occ
B:K1405

b:60.9
occ:1.00
O B:HOH2009 2.6 44.0 1.0
OD2 B:ASP374 2.7 49.6 1.0
O A:HOH2018 2.8 68.7 1.0
OG1 B:THR380 2.9 43.6 1.0
OD2 B:ASP371 3.0 67.2 1.0
O B:HOH2007 3.0 63.1 1.0
OD1 B:ASP374 3.4 50.1 1.0
CG B:ASP374 3.4 49.7 1.0
N B:ASN381 3.7 37.2 1.0
CG B:ASP371 3.8 59.7 1.0
N B:THR380 3.8 46.4 1.0
CB B:ASN381 4.0 37.2 1.0
CB B:THR380 4.1 42.4 1.0
C B:THR380 4.2 40.5 1.0
CA B:THR380 4.2 41.1 1.0
OD1 B:ASP371 4.4 58.3 1.0
O B:HOH2008 4.4 44.6 1.0
CA B:ASN381 4.5 41.3 1.0
OE1 B:GLU291 4.6 53.7 1.0
CG2 B:THR380 4.7 38.1 1.0
CB B:ASP371 4.7 54.8 1.0
C B:GLY379 4.8 47.1 1.0
N B:ASP371 4.9 49.7 1.0
O B:THR369 4.9 50.3 1.0
CB B:ASP374 4.9 42.2 1.0

Reference:

A.Biundo, A.Hromic, T.Pavkov-Keller, K.Gruber, F.Quartinello, K.Haernvall, V.Perz, M.S.Arrell, M.Zinn, D.Ribitsch, G.M.Guebitz. Characterization of A Poly(Butylene Adipate-Co-Terephthalate)-Hydrolyzing Lipase From Pelosinus Fermentans. Appl.Microbiol.Biotechnol. V. 100 1753 2016.
ISSN: ISSN 0175-7598
PubMed: 26490551
DOI: 10.1007/S00253-015-7031-1
Page generated: Mon Aug 12 12:54:04 2024

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