Atomistry » Potassium » PDB 4xs6-4zum » 4zay
Atomistry »
  Potassium »
    PDB 4xs6-4zum »
      4zay »

Potassium in PDB 4zay: Structure of Ubix E49Q in Complex with A Covalent Adduct Between Dimethylallyl Monophosphate and Reduced Fmn

Protein crystallography data

The structure of Structure of Ubix E49Q in Complex with A Covalent Adduct Between Dimethylallyl Monophosphate and Reduced Fmn, PDB code: 4zay was solved by M.D.White, D.Leys, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 32.58 / 1.54
Space group F 2 3
Cell size a, b, c (Å), α, β, γ (°) 142.020, 142.020, 142.020, 90.00, 90.00, 90.00
R / Rfree (%) 14.5 / 17.6

Potassium Binding Sites:

The binding sites of Potassium atom in the Structure of Ubix E49Q in Complex with A Covalent Adduct Between Dimethylallyl Monophosphate and Reduced Fmn (pdb code 4zay). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total only one binding site of Potassium was determined in the Structure of Ubix E49Q in Complex with A Covalent Adduct Between Dimethylallyl Monophosphate and Reduced Fmn, PDB code: 4zay:

Potassium binding site 1 out of 1 in 4zay

Go back to Potassium Binding Sites List in 4zay
Potassium binding site 1 out of 1 in the Structure of Ubix E49Q in Complex with A Covalent Adduct Between Dimethylallyl Monophosphate and Reduced Fmn


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of Structure of Ubix E49Q in Complex with A Covalent Adduct Between Dimethylallyl Monophosphate and Reduced Fmn within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K305

b:47.1
occ:1.00
O A:HOH505 1.4 25.5 1.0
O A:HOH543 2.0 41.9 1.0
NE2 A:GLN81 4.0 33.5 1.0
N A:LYS40 4.1 18.7 1.0
CG A:GLN81 4.1 25.3 1.0
ND2 A:ASN118 4.2 20.1 1.0
O A:HOH537 4.2 35.2 1.0
CB A:GLN81 4.3 23.8 1.0
O A:HOH530 4.3 49.1 1.0
CG A:LYS40 4.3 38.7 1.0
CB A:LYS40 4.3 24.9 1.0
CD A:LYS40 4.3 51.1 1.0
CD A:GLN81 4.6 31.1 1.0
CB A:SER39 4.8 16.8 1.0
CB A:ASN118 4.8 18.4 1.0
CA A:SER39 4.8 16.1 1.0
CA A:LYS40 4.8 21.9 1.0
CE A:LYS40 4.8 61.7 1.0
CG A:ASN118 4.9 18.5 1.0

Reference:

M.D.White, K.A.Payne, K.Fisher, S.A.Marshall, D.Parker, N.J.Rattray, D.K.Trivedi, R.Goodacre, S.E.Rigby, N.S.Scrutton, S.Hay, D.Leys. Ubix Is A Flavin Prenyltransferase Required For Bacterial Ubiquinone Biosynthesis. Nature V. 522 497 2015.
ISSN: ESSN 1476-4687
PubMed: 26083743
DOI: 10.1038/NATURE14559
Page generated: Mon Aug 12 12:47:22 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy