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Potassium in PDB 4yu5: Crystal Structure of Selenomethionine Variant of Bacillus Anthracis Immune Inhibitor A2 Peptidase Zymogen

Protein crystallography data

The structure of Crystal Structure of Selenomethionine Variant of Bacillus Anthracis Immune Inhibitor A2 Peptidase Zymogen, PDB code: 4yu5 was solved by J.L.Arolas, T.Goulas, F.X.Gomis-Ruth, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 42.46 / 2.90
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 97.610, 102.410, 242.880, 90.00, 90.00, 90.00
R / Rfree (%) 18.2 / 20.7

Other elements in 4yu5:

The structure of Crystal Structure of Selenomethionine Variant of Bacillus Anthracis Immune Inhibitor A2 Peptidase Zymogen also contains other interesting chemical elements:

Zinc (Zn) 2 atoms
Calcium (Ca) 8 atoms

Potassium Binding Sites:

The binding sites of Potassium atom in the Crystal Structure of Selenomethionine Variant of Bacillus Anthracis Immune Inhibitor A2 Peptidase Zymogen (pdb code 4yu5). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total only one binding site of Potassium was determined in the Crystal Structure of Selenomethionine Variant of Bacillus Anthracis Immune Inhibitor A2 Peptidase Zymogen, PDB code: 4yu5:

Potassium binding site 1 out of 1 in 4yu5

Go back to Potassium Binding Sites List in 4yu5
Potassium binding site 1 out of 1 in the Crystal Structure of Selenomethionine Variant of Bacillus Anthracis Immune Inhibitor A2 Peptidase Zymogen


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of Crystal Structure of Selenomethionine Variant of Bacillus Anthracis Immune Inhibitor A2 Peptidase Zymogen within 5.0Å range:
probe atom residue distance (Å) B Occ
B:K1006

b:78.1
occ:1.00
OE1 B:GLN154 3.6 61.8 1.0
OG1 B:THR467 3.7 48.8 1.0
O B:VAL466 4.3 53.8 1.0
CA B:THR467 4.4 46.2 1.0
CD B:GLN154 4.6 62.6 1.0
CB B:THR467 4.6 45.6 1.0
C B:VAL466 4.6 51.0 1.0
N B:THR467 4.7 47.0 1.0
CG2 B:VAL466 4.7 44.9 1.0

Reference:

J.L.Arolas, T.Goulas, A.P.Pomerantsev, S.H.Leppla, F.X.Gomis-Ruth. Structural Basis For Latency and Function of Immune Inhibitor A Metallopeptidase, A Modulator of the Bacillus Anthracis Secretome. Structure V. 24 25 2016.
ISSN: ISSN 0969-2126
PubMed: 26745529
DOI: 10.1016/J.STR.2015.10.015
Page generated: Mon Aug 12 12:44:40 2024

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