Atomistry » Potassium » PDB 4pkl-4qrh » 4qne
Atomistry »
  Potassium »
    PDB 4pkl-4qrh »
      4qne »

Potassium in PDB 4qne: Inosine 5'-Monophosphate Dehydrogenase From Vibrio Cholerae, Deletion Mutant, in Complex with Nad and Imp

Enzymatic activity of Inosine 5'-Monophosphate Dehydrogenase From Vibrio Cholerae, Deletion Mutant, in Complex with Nad and Imp

All present enzymatic activity of Inosine 5'-Monophosphate Dehydrogenase From Vibrio Cholerae, Deletion Mutant, in Complex with Nad and Imp:
1.1.1.205;

Protein crystallography data

The structure of Inosine 5'-Monophosphate Dehydrogenase From Vibrio Cholerae, Deletion Mutant, in Complex with Nad and Imp, PDB code: 4qne was solved by J.Osipiuk, N.Maltseva, M.Makowska-Grzyska, M.Gu, W.F.Anderson, A.Joachimiak, Center For Structural Genomics Of Infectious Diseases(Csgid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 47.50 / 2.32
Space group P 4 21 2
Cell size a, b, c (Å), α, β, γ (°) 121.334, 121.334, 94.470, 90.00, 90.00, 90.00
R / Rfree (%) 19.6 / 27

Potassium Binding Sites:

The binding sites of Potassium atom in the Inosine 5'-Monophosphate Dehydrogenase From Vibrio Cholerae, Deletion Mutant, in Complex with Nad and Imp (pdb code 4qne). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total 2 binding sites of Potassium where determined in the Inosine 5'-Monophosphate Dehydrogenase From Vibrio Cholerae, Deletion Mutant, in Complex with Nad and Imp, PDB code: 4qne:
Jump to Potassium binding site number: 1; 2;

Potassium binding site 1 out of 2 in 4qne

Go back to Potassium Binding Sites List in 4qne
Potassium binding site 1 out of 2 in the Inosine 5'-Monophosphate Dehydrogenase From Vibrio Cholerae, Deletion Mutant, in Complex with Nad and Imp


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of Inosine 5'-Monophosphate Dehydrogenase From Vibrio Cholerae, Deletion Mutant, in Complex with Nad and Imp within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K503

b:31.2
occ:1.00
O A:GLY302 2.9 28.8 1.0
O A:GLY304 2.9 35.3 1.0
O A:CYS307 3.0 37.2 1.0
O A:HOH617 3.4 28.8 1.0
C A:CYS307 3.8 35.4 1.0
C A:PRO303 3.9 32.4 1.0
CB A:CYS307 3.9 38.4 0.6
C A:GLY304 4.0 31.7 1.0
C A:GLY302 4.0 30.4 1.0
O A:PRO303 4.0 29.6 1.0
N A:GLY304 4.1 32.7 1.0
N A:CYS307 4.2 35.8 1.0
CA A:CYS307 4.3 36.9 0.6
CB A:CYS307 4.3 37.1 0.4
CA A:PRO303 4.3 30.1 1.0
CA A:CYS307 4.3 36.2 0.4
N A:PRO303 4.6 29.5 1.0
CA A:GLY304 4.7 32.2 1.0
O A:SER305 4.8 36.1 1.0
C A:SER305 4.9 35.4 1.0
N A:THR308 4.9 35.3 1.0
SG A:CYS307 4.9 44.8 0.6
N A:SER305 5.0 31.9 1.0

Potassium binding site 2 out of 2 in 4qne

Go back to Potassium Binding Sites List in 4qne
Potassium binding site 2 out of 2 in the Inosine 5'-Monophosphate Dehydrogenase From Vibrio Cholerae, Deletion Mutant, in Complex with Nad and Imp


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 2 of Inosine 5'-Monophosphate Dehydrogenase From Vibrio Cholerae, Deletion Mutant, in Complex with Nad and Imp within 5.0Å range:
probe atom residue distance (Å) B Occ
B:K503

b:34.0
occ:1.00
O B:GLY304 2.7 30.4 1.0
O B:CYS307 2.8 33.6 1.0
O B:GLY302 2.9 30.8 1.0
C B:CYS307 3.7 35.9 1.0
C B:GLY304 3.8 29.6 1.0
C B:PRO303 3.9 34.8 1.0
N B:GLY304 3.9 30.7 1.0
CB B:CYS307 4.0 41.5 0.6
C B:GLY302 4.0 33.4 1.0
O B:PRO303 4.1 34.1 1.0
N B:CYS307 4.2 40.0 1.0
CA B:CYS307 4.2 39.2 0.6
CB B:CYS307 4.3 40.6 0.4
CA B:CYS307 4.3 38.6 0.4
CA B:PRO303 4.3 33.6 1.0
CA B:GLY304 4.5 30.8 1.0
O B:SER305 4.6 32.3 1.0
N B:PRO303 4.7 35.6 1.0
C B:SER305 4.8 32.1 1.0
N B:THR308 4.8 34.3 1.0
N B:SER305 4.8 30.5 1.0
SG B:CYS307 4.9 48.5 0.6

Reference:

J.Osipiuk, N.Maltseva, M.Makowska-Grzyska, M.Gu, W.F.Anderson, A.Joachimiak. Inosine 5'-Monophosphate Dehydrogenase From Vibrio Cholerae, Deletion Mutant, in Complex with Nad and Imp To Be Published.
Page generated: Mon Aug 12 11:54:39 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy