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Potassium in PDB 4qe9: Open Mthk Pore Structure Soaked in 10 Mm BA2+/100 Mm K+

Protein crystallography data

The structure of Open Mthk Pore Structure Soaked in 10 Mm BA2+/100 Mm K+, PDB code: 4qe9 was solved by R.Guo, W.Zeng, H.Cui, L.Chen, S.Ye, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.50 / 2.15
Space group P 4 21 2
Cell size a, b, c (Å), α, β, γ (°) 61.005, 61.005, 44.950, 90.00, 90.00, 90.00
R / Rfree (%) 19.8 / 25.7

Potassium Binding Sites:

The binding sites of Potassium atom in the Open Mthk Pore Structure Soaked in 10 Mm BA2+/100 Mm K+ (pdb code 4qe9). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total 6 binding sites of Potassium where determined in the Open Mthk Pore Structure Soaked in 10 Mm BA2+/100 Mm K+, PDB code: 4qe9:
Jump to Potassium binding site number: 1; 2; 3; 4; 5; 6;

Potassium binding site 1 out of 6 in 4qe9

Go back to Potassium Binding Sites List in 4qe9
Potassium binding site 1 out of 6 in the Open Mthk Pore Structure Soaked in 10 Mm BA2+/100 Mm K+


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of Open Mthk Pore Structure Soaked in 10 Mm BA2+/100 Mm K+ within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K201

b:47.9
occ:0.25
O A:TYR62 3.0 38.8 1.0
O A:GLY61 3.0 39.0 1.0
K A:K202 3.2 45.4 0.2
C A:TYR62 3.6 39.1 1.0
CA A:TYR62 4.1 38.8 1.0
C A:GLY61 4.2 39.1 1.0
N A:GLY63 4.3 39.1 1.0
CA A:GLY63 4.6 39.0 1.0
N A:TYR62 4.7 38.8 1.0

Potassium binding site 2 out of 6 in 4qe9

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Potassium binding site 2 out of 6 in the Open Mthk Pore Structure Soaked in 10 Mm BA2+/100 Mm K+


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 2 of Open Mthk Pore Structure Soaked in 10 Mm BA2+/100 Mm K+ within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K202

b:45.4
occ:0.25
O A:GLY61 2.8 39.0 1.0
O A:VAL60 3.0 38.4 1.0
K A:K203 3.1 42.0 0.2
K A:K201 3.2 47.9 0.2
C A:GLY61 3.7 39.1 1.0
C A:VAL60 4.1 38.6 1.0
CA A:GLY61 4.2 38.8 1.0
N A:TYR62 4.6 38.8 1.0
N A:GLY61 4.6 39.2 1.0
CA A:TYR62 4.9 38.8 1.0

Potassium binding site 3 out of 6 in 4qe9

Go back to Potassium Binding Sites List in 4qe9
Potassium binding site 3 out of 6 in the Open Mthk Pore Structure Soaked in 10 Mm BA2+/100 Mm K+


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 3 of Open Mthk Pore Structure Soaked in 10 Mm BA2+/100 Mm K+ within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K203

b:42.0
occ:0.25
O A:THR59 2.9 38.6 1.0
O A:VAL60 2.9 38.4 1.0
K A:K202 3.1 45.4 0.2
K A:K204 3.6 44.5 0.2
C A:VAL60 3.7 38.6 1.0
C A:THR59 4.0 39.1 1.0
CA A:VAL60 4.2 38.3 1.0
N A:VAL60 4.6 38.4 1.0
N A:GLY61 4.7 39.2 1.0

Potassium binding site 4 out of 6 in 4qe9

Go back to Potassium Binding Sites List in 4qe9
Potassium binding site 4 out of 6 in the Open Mthk Pore Structure Soaked in 10 Mm BA2+/100 Mm K+


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 4 of Open Mthk Pore Structure Soaked in 10 Mm BA2+/100 Mm K+ within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K204

b:44.5
occ:0.25
OG1 A:THR59 2.8 40.2 1.0
O A:THR59 3.1 38.6 1.0
K A:K206 3.2 0.3 0.3
CB A:THR59 3.6 40.1 1.0
K A:K203 3.6 42.0 0.2
C A:THR59 4.0 39.1 1.0
CA A:THR59 4.5 39.1 1.0
CG2 A:THR59 4.8 42.5 1.0

Potassium binding site 5 out of 6 in 4qe9

Go back to Potassium Binding Sites List in 4qe9
Potassium binding site 5 out of 6 in the Open Mthk Pore Structure Soaked in 10 Mm BA2+/100 Mm K+


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 5 of Open Mthk Pore Structure Soaked in 10 Mm BA2+/100 Mm K+ within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K205

b:94.1
occ:0.25
O A:HOH343 4.1 81.1 1.0
O A:HOH342 4.7 59.7 1.0

Potassium binding site 6 out of 6 in 4qe9

Go back to Potassium Binding Sites List in 4qe9
Potassium binding site 6 out of 6 in the Open Mthk Pore Structure Soaked in 10 Mm BA2+/100 Mm K+


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 6 of Open Mthk Pore Structure Soaked in 10 Mm BA2+/100 Mm K+ within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K206

b:0.3
occ:0.25
O A:HOH341 2.8 50.3 1.0
K A:K204 3.2 44.5 0.2
OG1 A:THR59 3.6 40.2 1.0
CB A:THR59 4.7 40.1 1.0
CG2 A:THR59 5.0 42.5 1.0

Reference:

R.Guo, W.Zeng, H.Cui, L.Chen, S.Ye. Ionic Interactions of BA2+ Blockades in the Mthk K+ Channel J.Gen.Physiol..
ISSN: ESSN 1540-7748
Page generated: Mon Aug 12 11:53:38 2024

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