Potassium in PDB 4p7g: Rat Apo-Comt, Phosphate Bound
Enzymatic activity of Rat Apo-Comt, Phosphate Bound
All present enzymatic activity of Rat Apo-Comt, Phosphate Bound:
2.1.1.6;
Protein crystallography data
The structure of Rat Apo-Comt, Phosphate Bound, PDB code: 4p7g
was solved by
A.Ehler,
J.Benz,
D.Schlatter,
M.G.Rudolph,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
48.70 /
2.58
|
Space group
|
P 32 2 1
|
Cell size a, b, c (Å), α, β, γ (°)
|
71.600,
71.600,
393.438,
90.00,
90.00,
120.00
|
R / Rfree (%)
|
21 /
24.7
|
Potassium Binding Sites:
The binding sites of Potassium atom in the Rat Apo-Comt, Phosphate Bound
(pdb code 4p7g). This binding sites where shown within
5.0 Angstroms radius around Potassium atom.
In total 2 binding sites of Potassium where determined in the
Rat Apo-Comt, Phosphate Bound, PDB code: 4p7g:
Jump to Potassium binding site number:
1;
2;
Potassium binding site 1 out
of 2 in 4p7g
Go back to
Potassium Binding Sites List in 4p7g
Potassium binding site 1 out
of 2 in the Rat Apo-Comt, Phosphate Bound
 Mono view
 Stereo pair view
|
A full contact list of Potassium with other atoms in the K binding
site number 1 of Rat Apo-Comt, Phosphate Bound within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:K301
b:74.0
occ:1.00
|
O
|
A:SER229
|
2.4
|
49.5
|
1.0
|
O
|
A:PHE232
|
2.5
|
49.7
|
1.0
|
O
|
A:VAL226
|
2.6
|
46.5
|
1.0
|
O
|
B:HOH419
|
2.7
|
47.0
|
1.0
|
O
|
A:ARG227
|
2.7
|
56.9
|
1.0
|
O
|
B:GLU242
|
2.8
|
65.4
|
1.0
|
C
|
B:GLU242
|
3.2
|
63.4
|
1.0
|
C
|
A:ARG227
|
3.3
|
55.1
|
1.0
|
C
|
A:SER229
|
3.5
|
52.2
|
1.0
|
CA
|
B:GLU242
|
3.6
|
56.6
|
1.0
|
C
|
A:PHE232
|
3.6
|
51.0
|
1.0
|
C
|
A:VAL226
|
3.7
|
48.6
|
1.0
|
CA
|
A:ARG227
|
3.7
|
47.4
|
1.0
|
O
|
B:LEU241
|
4.1
|
58.0
|
1.0
|
N
|
B:TYR243
|
4.1
|
60.2
|
1.0
|
O
|
A:GLY228
|
4.2
|
57.6
|
1.0
|
C
|
A:GLY228
|
4.2
|
56.4
|
1.0
|
N
|
A:ARG227
|
4.2
|
47.2
|
1.0
|
N
|
A:SER229
|
4.2
|
51.2
|
1.0
|
N
|
A:GLY228
|
4.2
|
52.1
|
1.0
|
CA
|
A:PHE232
|
4.2
|
48.1
|
1.0
|
N
|
A:PHE232
|
4.3
|
49.2
|
1.0
|
O
|
B:TYR243
|
4.3
|
59.6
|
1.0
|
SG
|
A:CYS234
|
4.3
|
47.5
|
1.0
|
CB
|
A:PHE232
|
4.3
|
49.7
|
1.0
|
N
|
A:SER230
|
4.3
|
49.5
|
1.0
|
CA
|
A:SER229
|
4.4
|
50.6
|
1.0
|
CB
|
B:GLU242
|
4.4
|
60.0
|
1.0
|
CA
|
A:SER230
|
4.5
|
48.3
|
1.0
|
N
|
A:GLU233
|
4.6
|
48.5
|
1.0
|
N
|
B:GLU242
|
4.7
|
54.4
|
1.0
|
C
|
B:TYR243
|
4.7
|
63.2
|
1.0
|
CA
|
A:GLY228
|
4.8
|
52.8
|
1.0
|
C
|
B:LEU241
|
4.8
|
55.6
|
1.0
|
CA
|
B:TYR243
|
4.8
|
62.0
|
1.0
|
CA
|
A:GLU233
|
4.9
|
48.9
|
1.0
|
C
|
A:SER230
|
5.0
|
51.4
|
1.0
|
CA
|
A:VAL226
|
5.0
|
44.2
|
1.0
|
|
Potassium binding site 2 out
of 2 in 4p7g
Go back to
Potassium Binding Sites List in 4p7g
Potassium binding site 2 out
of 2 in the Rat Apo-Comt, Phosphate Bound
 Mono view
 Stereo pair view
|
A full contact list of Potassium with other atoms in the K binding
site number 2 of Rat Apo-Comt, Phosphate Bound within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:K301
b:75.9
occ:1.00
|
O
|
B:SER229
|
2.4
|
54.8
|
1.0
|
O
|
B:PHE232
|
2.4
|
49.0
|
1.0
|
O
|
A:GLU242
|
2.7
|
73.1
|
1.0
|
O
|
B:ARG227
|
2.7
|
57.2
|
1.0
|
O
|
B:VAL226
|
2.8
|
55.9
|
1.0
|
O
|
A:HOH428
|
2.9
|
35.0
|
1.0
|
C
|
A:GLU242
|
3.1
|
72.2
|
1.0
|
C
|
B:ARG227
|
3.3
|
55.7
|
1.0
|
CA
|
B:ARG227
|
3.5
|
49.0
|
1.0
|
C
|
B:SER229
|
3.5
|
55.5
|
1.0
|
CA
|
A:GLU242
|
3.6
|
63.9
|
1.0
|
C
|
B:PHE232
|
3.6
|
50.9
|
1.0
|
C
|
B:VAL226
|
3.8
|
54.1
|
1.0
|
N
|
A:TYR243
|
3.9
|
70.7
|
1.0
|
O
|
A:TYR243
|
3.9
|
70.0
|
1.0
|
O
|
A:LEU241
|
4.0
|
57.9
|
1.0
|
N
|
B:ARG227
|
4.2
|
48.4
|
1.0
|
N
|
B:SER229
|
4.2
|
50.9
|
1.0
|
N
|
B:GLY228
|
4.3
|
53.1
|
1.0
|
C
|
A:TYR243
|
4.3
|
73.1
|
1.0
|
SG
|
B:CYS234
|
4.4
|
46.4
|
1.0
|
CA
|
B:PHE232
|
4.4
|
47.2
|
1.0
|
C
|
B:GLY228
|
4.4
|
54.9
|
1.0
|
N
|
B:SER230
|
4.4
|
53.0
|
1.0
|
CA
|
B:SER229
|
4.4
|
50.9
|
1.0
|
N
|
B:PHE232
|
4.4
|
50.4
|
1.0
|
CA
|
A:TYR243
|
4.5
|
72.2
|
1.0
|
CA
|
B:SER230
|
4.5
|
53.4
|
1.0
|
CB
|
B:PHE232
|
4.5
|
47.4
|
1.0
|
CB
|
A:GLU242
|
4.5
|
67.0
|
1.0
|
N
|
A:GLU242
|
4.6
|
60.3
|
1.0
|
N
|
B:GLU233
|
4.7
|
48.8
|
1.0
|
C
|
A:LEU241
|
4.7
|
59.5
|
1.0
|
OG
|
B:SER229
|
4.7
|
56.1
|
1.0
|
O
|
B:GLY228
|
4.8
|
54.2
|
1.0
|
CB
|
B:ARG227
|
4.8
|
50.2
|
1.0
|
CA
|
B:GLY228
|
4.8
|
53.5
|
1.0
|
CA
|
B:GLU233
|
4.9
|
48.9
|
1.0
|
|
Reference:
A.Ehler,
J.Benz,
D.Schlatter,
M.G.Rudolph.
Mapping the Conformational Space Accessible to Catechol-O-Methyltransferase. Acta Crystallogr.,Sect.D V. 70 2163 2014.
ISSN: ESSN 1399-0047
PubMed: 25084335
DOI: 10.1107/S1399004714012917
Page generated: Mon Aug 12 11:43:01 2024
|