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Potassium in PDB 4p7g: Rat Apo-Comt, Phosphate Bound

Enzymatic activity of Rat Apo-Comt, Phosphate Bound

All present enzymatic activity of Rat Apo-Comt, Phosphate Bound:
2.1.1.6;

Protein crystallography data

The structure of Rat Apo-Comt, Phosphate Bound, PDB code: 4p7g was solved by A.Ehler, J.Benz, D.Schlatter, M.G.Rudolph, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.70 / 2.58
Space group P 32 2 1
Cell size a, b, c (Å), α, β, γ (°) 71.600, 71.600, 393.438, 90.00, 90.00, 120.00
R / Rfree (%) 21 / 24.7

Potassium Binding Sites:

The binding sites of Potassium atom in the Rat Apo-Comt, Phosphate Bound (pdb code 4p7g). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total 2 binding sites of Potassium where determined in the Rat Apo-Comt, Phosphate Bound, PDB code: 4p7g:
Jump to Potassium binding site number: 1; 2;

Potassium binding site 1 out of 2 in 4p7g

Go back to Potassium Binding Sites List in 4p7g
Potassium binding site 1 out of 2 in the Rat Apo-Comt, Phosphate Bound


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of Rat Apo-Comt, Phosphate Bound within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K301

b:74.0
occ:1.00
O A:SER229 2.4 49.5 1.0
O A:PHE232 2.5 49.7 1.0
O A:VAL226 2.6 46.5 1.0
O B:HOH419 2.7 47.0 1.0
O A:ARG227 2.7 56.9 1.0
O B:GLU242 2.8 65.4 1.0
C B:GLU242 3.2 63.4 1.0
C A:ARG227 3.3 55.1 1.0
C A:SER229 3.5 52.2 1.0
CA B:GLU242 3.6 56.6 1.0
C A:PHE232 3.6 51.0 1.0
C A:VAL226 3.7 48.6 1.0
CA A:ARG227 3.7 47.4 1.0
O B:LEU241 4.1 58.0 1.0
N B:TYR243 4.1 60.2 1.0
O A:GLY228 4.2 57.6 1.0
C A:GLY228 4.2 56.4 1.0
N A:ARG227 4.2 47.2 1.0
N A:SER229 4.2 51.2 1.0
N A:GLY228 4.2 52.1 1.0
CA A:PHE232 4.2 48.1 1.0
N A:PHE232 4.3 49.2 1.0
O B:TYR243 4.3 59.6 1.0
SG A:CYS234 4.3 47.5 1.0
CB A:PHE232 4.3 49.7 1.0
N A:SER230 4.3 49.5 1.0
CA A:SER229 4.4 50.6 1.0
CB B:GLU242 4.4 60.0 1.0
CA A:SER230 4.5 48.3 1.0
N A:GLU233 4.6 48.5 1.0
N B:GLU242 4.7 54.4 1.0
C B:TYR243 4.7 63.2 1.0
CA A:GLY228 4.8 52.8 1.0
C B:LEU241 4.8 55.6 1.0
CA B:TYR243 4.8 62.0 1.0
CA A:GLU233 4.9 48.9 1.0
C A:SER230 5.0 51.4 1.0
CA A:VAL226 5.0 44.2 1.0

Potassium binding site 2 out of 2 in 4p7g

Go back to Potassium Binding Sites List in 4p7g
Potassium binding site 2 out of 2 in the Rat Apo-Comt, Phosphate Bound


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 2 of Rat Apo-Comt, Phosphate Bound within 5.0Å range:
probe atom residue distance (Å) B Occ
B:K301

b:75.9
occ:1.00
O B:SER229 2.4 54.8 1.0
O B:PHE232 2.4 49.0 1.0
O A:GLU242 2.7 73.1 1.0
O B:ARG227 2.7 57.2 1.0
O B:VAL226 2.8 55.9 1.0
O A:HOH428 2.9 35.0 1.0
C A:GLU242 3.1 72.2 1.0
C B:ARG227 3.3 55.7 1.0
CA B:ARG227 3.5 49.0 1.0
C B:SER229 3.5 55.5 1.0
CA A:GLU242 3.6 63.9 1.0
C B:PHE232 3.6 50.9 1.0
C B:VAL226 3.8 54.1 1.0
N A:TYR243 3.9 70.7 1.0
O A:TYR243 3.9 70.0 1.0
O A:LEU241 4.0 57.9 1.0
N B:ARG227 4.2 48.4 1.0
N B:SER229 4.2 50.9 1.0
N B:GLY228 4.3 53.1 1.0
C A:TYR243 4.3 73.1 1.0
SG B:CYS234 4.4 46.4 1.0
CA B:PHE232 4.4 47.2 1.0
C B:GLY228 4.4 54.9 1.0
N B:SER230 4.4 53.0 1.0
CA B:SER229 4.4 50.9 1.0
N B:PHE232 4.4 50.4 1.0
CA A:TYR243 4.5 72.2 1.0
CA B:SER230 4.5 53.4 1.0
CB B:PHE232 4.5 47.4 1.0
CB A:GLU242 4.5 67.0 1.0
N A:GLU242 4.6 60.3 1.0
N B:GLU233 4.7 48.8 1.0
C A:LEU241 4.7 59.5 1.0
OG B:SER229 4.7 56.1 1.0
O B:GLY228 4.8 54.2 1.0
CB B:ARG227 4.8 50.2 1.0
CA B:GLY228 4.8 53.5 1.0
CA B:GLU233 4.9 48.9 1.0

Reference:

A.Ehler, J.Benz, D.Schlatter, M.G.Rudolph. Mapping the Conformational Space Accessible to Catechol-O-Methyltransferase. Acta Crystallogr.,Sect.D V. 70 2163 2014.
ISSN: ESSN 1399-0047
PubMed: 25084335
DOI: 10.1107/S1399004714012917
Page generated: Mon Aug 12 11:43:01 2024

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