Atomistry » Potassium » PDB 4mlz-4pjo » 4o5f
Atomistry »
  Potassium »
    PDB 4mlz-4pjo »
      4o5f »

Potassium in PDB 4o5f: Crystal Structure of Type III Pantothenate Kinase From Burkholderia Thailandensis in Complex with Pantothenate and Phosphate

Enzymatic activity of Crystal Structure of Type III Pantothenate Kinase From Burkholderia Thailandensis in Complex with Pantothenate and Phosphate

All present enzymatic activity of Crystal Structure of Type III Pantothenate Kinase From Burkholderia Thailandensis in Complex with Pantothenate and Phosphate:
2.7.1.33;

Protein crystallography data

The structure of Crystal Structure of Type III Pantothenate Kinase From Burkholderia Thailandensis in Complex with Pantothenate and Phosphate, PDB code: 4o5f was solved by Seattle Structural Gemomics Center For Infectious Disease (Ssgcid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.00 / 1.55
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 99.440, 99.440, 112.900, 90.00, 90.00, 90.00
R / Rfree (%) 15.6 / 18.3

Other elements in 4o5f:

The structure of Crystal Structure of Type III Pantothenate Kinase From Burkholderia Thailandensis in Complex with Pantothenate and Phosphate also contains other interesting chemical elements:

Chlorine (Cl) 2 atoms

Potassium Binding Sites:

The binding sites of Potassium atom in the Crystal Structure of Type III Pantothenate Kinase From Burkholderia Thailandensis in Complex with Pantothenate and Phosphate (pdb code 4o5f). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total 2 binding sites of Potassium where determined in the Crystal Structure of Type III Pantothenate Kinase From Burkholderia Thailandensis in Complex with Pantothenate and Phosphate, PDB code: 4o5f:
Jump to Potassium binding site number: 1; 2;

Potassium binding site 1 out of 2 in 4o5f

Go back to Potassium Binding Sites List in 4o5f
Potassium binding site 1 out of 2 in the Crystal Structure of Type III Pantothenate Kinase From Burkholderia Thailandensis in Complex with Pantothenate and Phosphate


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of Crystal Structure of Type III Pantothenate Kinase From Burkholderia Thailandensis in Complex with Pantothenate and Phosphate within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K308

b:22.4
occ:1.00
O A:LEU162 2.6 17.5 1.0
O A:HOH578 2.6 32.9 1.0
O A:GLY156 2.7 18.1 1.0
O A:THR159 2.7 19.6 1.0
O A:HOH636 2.8 49.9 1.0
O A:HOH684 3.4 51.3 1.0
O A:ALA160 3.4 23.5 1.0
C A:GLY156 3.7 17.8 1.0
C A:LEU162 3.8 16.9 1.0
C A:ALA160 3.8 21.3 1.0
C A:THR159 3.9 19.2 1.0
N A:LEU162 4.1 17.8 1.0
CA A:GLY156 4.2 16.4 1.0
CA A:ALA160 4.3 20.7 1.0
N A:GLN161 4.4 20.4 1.0
OG1 A:THR159 4.4 17.4 1.0
CA A:LEU162 4.5 16.8 1.0
C A:GLN161 4.5 19.7 1.0
OG1 A:THR164 4.6 20.2 1.0
N A:ALA160 4.6 19.6 1.0
O A:HOH480 4.7 28.8 1.0
N A:PRO163 4.8 16.8 1.0
O A:HOH616 4.8 39.6 1.0
CA A:PRO163 4.8 17.4 1.0
N A:THR159 4.9 18.1 1.0
CA A:GLN161 4.9 20.9 1.0
N A:THR164 4.9 17.8 1.0
CA A:THR159 4.9 18.3 1.0
N A:MET157 4.9 18.2 1.0
C A:PRO163 5.0 16.9 1.0

Potassium binding site 2 out of 2 in 4o5f

Go back to Potassium Binding Sites List in 4o5f
Potassium binding site 2 out of 2 in the Crystal Structure of Type III Pantothenate Kinase From Burkholderia Thailandensis in Complex with Pantothenate and Phosphate


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 2 of Crystal Structure of Type III Pantothenate Kinase From Burkholderia Thailandensis in Complex with Pantothenate and Phosphate within 5.0Å range:
probe atom residue distance (Å) B Occ
B:K301

b:35.4
occ:1.00
O B:HOH438 2.5 41.9 1.0
O B:THR159 2.7 22.5 1.0
O B:LEU162 2.8 22.5 1.0
O B:HOH489 2.8 54.9 1.0
O B:GLY156 2.9 23.0 1.0
O B:HOH445 3.0 38.9 1.0
O B:ALA160 3.5 25.4 1.0
O B:HOH424 3.5 34.4 1.0
C B:ALA160 3.7 23.1 1.0
N B:LEU162 3.8 20.5 1.0
C B:THR159 3.8 21.4 1.0
C B:LEU162 3.9 21.4 1.0
C B:GLY156 4.0 21.5 1.0
N B:GLN161 4.0 21.8 1.0
OG1 B:THR159 4.2 19.8 1.0
C B:GLN161 4.2 21.6 1.0
CA B:ALA160 4.3 22.4 1.0
CA B:LEU162 4.4 19.9 1.0
CA B:GLY156 4.4 20.2 1.0
N B:ALA160 4.5 21.2 1.0
CA B:GLN161 4.5 21.3 1.0
CA B:THR159 4.8 20.8 1.0
N B:THR159 4.9 20.3 1.0
O B:LEU155 4.9 19.0 1.0
O B:HOH597 4.9 47.1 1.0
O B:GLN161 4.9 24.1 1.0

Reference:

J.Abendroth, D.M.Dranow, D.Lorimer, J.W.Fairman, T.E.Edwards, Seattle Structural Genomics Center For Infectious Disease(Ssgcid). Crystal Structure of Type III Pantothenate Kinase From Burkholderia Thailandensis in Complex with Pantothenate and Phosphate To Be Published.
Page generated: Sun Dec 13 23:46:29 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy