Atomistry » Potassium » PDB 4ikr-4k8t » 4k3d
Atomistry »
  Potassium »
    PDB 4ikr-4k8t »
      4k3d »

Potassium in PDB 4k3d: Crystal Structure of Bovine Antibody BLV1H12 with Ultralong Cdr H3

Protein crystallography data

The structure of Crystal Structure of Bovine Antibody BLV1H12 with Ultralong Cdr H3, PDB code: 4k3d was solved by D.C.Ekiert, F.Wang, I.A.Wilson, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 40.43 / 1.85
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 71.410, 127.600, 127.870, 90.00, 90.00, 90.00
R / Rfree (%) 18.2 / 21

Potassium Binding Sites:

The binding sites of Potassium atom in the Crystal Structure of Bovine Antibody BLV1H12 with Ultralong Cdr H3 (pdb code 4k3d). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total only one binding site of Potassium was determined in the Crystal Structure of Bovine Antibody BLV1H12 with Ultralong Cdr H3, PDB code: 4k3d:

Potassium binding site 1 out of 1 in 4k3d

Go back to Potassium Binding Sites List in 4k3d
Potassium binding site 1 out of 1 in the Crystal Structure of Bovine Antibody BLV1H12 with Ultralong Cdr H3


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of Crystal Structure of Bovine Antibody BLV1H12 with Ultralong Cdr H3 within 5.0Å range:
probe atom residue distance (Å) B Occ
H:K301

b:38.0
occ:1.00
O H:SER30 2.8 36.1 1.0
O H:SER28 2.8 43.0 1.0
OG1 H:THR53 2.8 36.8 1.0
N H:SER30 3.7 36.5 1.0
CG2 H:THR53 3.7 38.0 1.0
C H:SER28 3.8 41.6 1.0
C H:SER30 3.8 34.9 1.0
C H:LEU29 3.8 39.0 1.0
CB H:THR53 3.8 37.8 1.0
CA H:LEU29 3.9 41.6 1.0
N H:LEU29 4.3 40.6 1.0
CA H:SER30 4.3 36.6 1.0
O H:LEU29 4.4 35.9 1.0
O H:HOH412 4.9 38.2 1.0
CB H:SER30 4.9 39.4 1.0
CA H:SER28 4.9 40.0 1.0
N H:ASP31 4.9 36.9 1.0
CA H:THR53 5.0 37.3 1.0

Reference:

F.Wang, D.C.Ekiert, I.Ahmad, W.Yu, Y.Zhang, O.Bazirgan, A.Torkamani, T.Raudsepp, W.Mwangi, M.F.Criscitiello, I.A.Wilson, P.G.Schultz, V.V.Smider. Reshaping Antibody Diversity. Cell(Cambridge,Mass.) V. 153 1379 2013.
ISSN: ISSN 0092-8674
PubMed: 23746848
DOI: 10.1016/J.CELL.2013.04.049
Page generated: Sun Dec 13 23:33:35 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy