Atomistry » Potassium » PDB 4ikr-4k8t » 4jah
Atomistry »
  Potassium »
    PDB 4ikr-4k8t »
      4jah »

Potassium in PDB 4jah: Crystal Structure of 2-Selenouridine Containing Rna

Protein crystallography data

The structure of Crystal Structure of 2-Selenouridine Containing Rna, PDB code: 4jah was solved by S.Jiang, J.Gan, H.Sun, Z.Huang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 40.22 / 1.50
Space group P 31 2 1
Cell size a, b, c (Å), α, β, γ (°) 46.444, 46.444, 120.612, 90.00, 90.00, 120.00
R / Rfree (%) 20.8 / 23.8

Potassium Binding Sites:

The binding sites of Potassium atom in the Crystal Structure of 2-Selenouridine Containing Rna (pdb code 4jah). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total 2 binding sites of Potassium where determined in the Crystal Structure of 2-Selenouridine Containing Rna, PDB code: 4jah:
Jump to Potassium binding site number: 1; 2;

Potassium binding site 1 out of 2 in 4jah

Go back to Potassium Binding Sites List in 4jah
Potassium binding site 1 out of 2 in the Crystal Structure of 2-Selenouridine Containing Rna


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of Crystal Structure of 2-Selenouridine Containing Rna within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K101

b:15.4
occ:1.00
O3' A:C8 2.7 17.0 1.0
O E:HOH106 2.8 32.2 1.0
O2' A:C8 2.9 15.2 1.0
OP1 E:A7 2.9 20.0 1.0
C3' A:C8 3.8 15.9 1.0
C2' A:C8 3.8 16.9 1.0
P E:A7 4.1 20.2 1.0
OP2 E:A7 4.4 22.1 1.0
O3' E:RUS6 4.5 18.0 1.0
C4' A:C8 4.5 14.8 1.0
O E:HOH116 4.7 39.9 1.0
O A:HOH204 4.7 25.2 1.0

Potassium binding site 2 out of 2 in 4jah

Go back to Potassium Binding Sites List in 4jah
Potassium binding site 2 out of 2 in the Crystal Structure of 2-Selenouridine Containing Rna


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 2 of Crystal Structure of 2-Selenouridine Containing Rna within 5.0Å range:
probe atom residue distance (Å) B Occ
C:K101

b:22.8
occ:1.00
O C:HOH206 2.4 27.8 1.0
O6 C:G1 3.2 27.8 1.0
O4 C:U2 3.4 30.2 1.0
O C:HOH219 4.0 38.7 1.0
C4 C:U2 4.2 27.3 1.0
N3 C:U2 4.2 27.6 1.0
C6 C:G1 4.3 25.4 1.0
O D:HOH112 4.7 26.8 1.0
N7 C:G1 5.0 33.0 1.0

Reference:

S.Jiang, J.Gan, H.Sun, Z.Huang. Crystal Structure of 2-Selenouridine Containing Rna To Be Published.
Page generated: Sun Dec 13 23:33:14 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy