Atomistry » Potassium » PDB 4ikr-4k8t » 4ip0
Atomistry »
  Potassium »
    PDB 4ikr-4k8t »
      4ip0 »

Potassium in PDB 4ip0: X-Ray Structure of the Complex Uridine Phosphorylase From Vibrio Cholerae with Phosphate Ion at 1.29 A Resolution

Enzymatic activity of X-Ray Structure of the Complex Uridine Phosphorylase From Vibrio Cholerae with Phosphate Ion at 1.29 A Resolution

All present enzymatic activity of X-Ray Structure of the Complex Uridine Phosphorylase From Vibrio Cholerae with Phosphate Ion at 1.29 A Resolution:
2.4.2.3;

Protein crystallography data

The structure of X-Ray Structure of the Complex Uridine Phosphorylase From Vibrio Cholerae with Phosphate Ion at 1.29 A Resolution, PDB code: 4ip0 was solved by I.I.Prokofev, A.A.Lashkov, A.G.Gabdoulkhakov, C.Betzel, A.M.Mikhailov, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 18.93 / 1.29
Space group P 1
Cell size a, b, c (Å), α, β, γ (°) 63.671, 71.062, 87.908, 69.63, 72.56, 85.73
R / Rfree (%) 17.2 / 20

Other elements in 4ip0:

The structure of X-Ray Structure of the Complex Uridine Phosphorylase From Vibrio Cholerae with Phosphate Ion at 1.29 A Resolution also contains other interesting chemical elements:

Chlorine (Cl) 2 atoms
Sodium (Na) 2 atoms

Potassium Binding Sites:

The binding sites of Potassium atom in the X-Ray Structure of the Complex Uridine Phosphorylase From Vibrio Cholerae with Phosphate Ion at 1.29 A Resolution (pdb code 4ip0). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total only one binding site of Potassium was determined in the X-Ray Structure of the Complex Uridine Phosphorylase From Vibrio Cholerae with Phosphate Ion at 1.29 A Resolution, PDB code: 4ip0:

Potassium binding site 1 out of 1 in 4ip0

Go back to Potassium Binding Sites List in 4ip0
Potassium binding site 1 out of 1 in the X-Ray Structure of the Complex Uridine Phosphorylase From Vibrio Cholerae with Phosphate Ion at 1.29 A Resolution


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of X-Ray Structure of the Complex Uridine Phosphorylase From Vibrio Cholerae with Phosphate Ion at 1.29 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
D:K301

b:6.1
occ:0.71
 OE2 D:GLU48 3.0 6.5 1.0
O C:ILE68 3.1 5.0 1.0
O D:ILE68 3.1 5.9 1.0
OG D:SER72 3.1 5.6 1.0
OG C:SER72 3.2 8.6 1.0
OE2 C:GLU48 3.5 19.3 1.0
CB D:SER72 3.6 3.7 1.0
CB C:SER72 3.6 6.6 1.0
N D:ILE68 3.6 3.9 1.0
O C:HOH693 3.6 4.7 0.6
O C:HOH693 3.7 6.5 0.4
N C:ILE68 3.7 3.8 1.0
CD D:GLU48 3.9 7.3 1.0
C D:ILE68 4.0 5.5 1.0
CD C:GLU48 4.0 10.6 1.0
C C:ILE68 4.0 4.3 1.0
CA D:GLY67 4.1 4.5 1.0
C D:GLY67 4.1 4.4 1.0
CG D:GLU48 4.2 6.0 1.0
CA C:GLY67 4.2 3.9 1.0
CG C:GLU48 4.2 6.5 1.0
C C:GLY67 4.2 3.5 1.0
CA D:ILE68 4.3 4.2 1.0
CA C:ILE68 4.4 3.4 1.0
O C:THR66 4.6 4.3 1.0
O D:THR66 4.7 5.1 1.0
CB D:ILE68 4.7 4.5 1.0
OE1 C:GLU48 4.7 8.5 1.0
CB C:GLU48 4.8 5.6 1.0
CA C:SER72 4.8 4.1 1.0
CA D:SER72 4.8 3.1 1.0
CB C:ILE68 4.9 4.3 1.0
N C:SER72 4.9 4.0 1.0
CB D:GLU48 4.9 5.1 1.0
N D:SER72 5.0 3.0 1.0
OE1 D:GLU48 5.0 7.9 1.0

Reference:

I.I.Prokofev, A.A.Lashkov, A.G.Gabdoulkhakov, C.Betzel, A.M.Mikhailov. X-Ray Structure of the Complex Uridine Phosphorylase From Vibrio Cholerae with Phosphate Ion at 1.29 A Resolution To Be Published.
Page generated: Mon Aug 12 11:02:18 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy