Atomistry » Potassium » PDB 4gx1-4ije » 4h33
Atomistry »
  Potassium »
    PDB 4gx1-4ije »
      4h33 »

Potassium in PDB 4h33: Crystal Structure of A Voltage-Gated K+ Channel Pore Module in A Closed State in Lipid Membranes, Tetragonal Crystal Form

Protein crystallography data

The structure of Crystal Structure of A Voltage-Gated K+ Channel Pore Module in A Closed State in Lipid Membranes, Tetragonal Crystal Form, PDB code: 4h33 was solved by J.S.Santos, G.A.Asmar-Rovira, G.W.Han, W.Liu, R.Syeda, V.Cherezov, K.A.Baker, R.C.Stevens, M.Montal, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 16.40 / 3.10
Space group P 4 21 2
Cell size a, b, c (Å), α, β, γ (°) 53.370, 53.370, 108.160, 90.00, 90.00, 90.00
R / Rfree (%) 28.1 / 30.5

Potassium Binding Sites:

The binding sites of Potassium atom in the Crystal Structure of A Voltage-Gated K+ Channel Pore Module in A Closed State in Lipid Membranes, Tetragonal Crystal Form (pdb code 4h33). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total 3 binding sites of Potassium where determined in the Crystal Structure of A Voltage-Gated K+ Channel Pore Module in A Closed State in Lipid Membranes, Tetragonal Crystal Form, PDB code: 4h33:
Jump to Potassium binding site number: 1; 2; 3;

Potassium binding site 1 out of 3 in 4h33

Go back to Potassium Binding Sites List in 4h33
Potassium binding site 1 out of 3 in the Crystal Structure of A Voltage-Gated K+ Channel Pore Module in A Closed State in Lipid Membranes, Tetragonal Crystal Form


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of Crystal Structure of A Voltage-Gated K+ Channel Pore Module in A Closed State in Lipid Membranes, Tetragonal Crystal Form within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K201

b:0.9
occ:0.25
O A:GLY59 2.4 78.7 1.0
K A:K202 3.1 67.5 0.2
O A:VAL58 3.1 78.7 1.0
C A:GLY59 3.5 78.7 1.0
CA A:GLY59 4.2 74.3 1.0
C A:VAL58 4.2 78.9 1.0
N A:TYR60 4.5 75.7 1.0
N A:GLY59 4.7 75.0 1.0
CA A:TYR60 4.8 76.0 1.0

Potassium binding site 2 out of 3 in 4h33

Go back to Potassium Binding Sites List in 4h33
Potassium binding site 2 out of 3 in the Crystal Structure of A Voltage-Gated K+ Channel Pore Module in A Closed State in Lipid Membranes, Tetragonal Crystal Form


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 2 of Crystal Structure of A Voltage-Gated K+ Channel Pore Module in A Closed State in Lipid Membranes, Tetragonal Crystal Form within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K202

b:67.5
occ:0.25
O A:VAL58 2.6 78.7 1.0
K A:K201 3.1 0.9 0.3
C A:VAL58 3.5 78.9 1.0
O A:THR57 3.6 80.4 1.0
K A:K203 3.9 93.2 0.2
CA A:VAL58 4.1 75.9 1.0
C A:THR57 4.5 80.9 1.0
O A:GLY59 4.5 78.7 1.0
N A:GLY59 4.5 75.0 1.0
N A:VAL58 4.7 76.4 1.0
CA A:GLY59 4.9 74.3 1.0

Potassium binding site 3 out of 3 in 4h33

Go back to Potassium Binding Sites List in 4h33
Potassium binding site 3 out of 3 in the Crystal Structure of A Voltage-Gated K+ Channel Pore Module in A Closed State in Lipid Membranes, Tetragonal Crystal Form


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 3 of Crystal Structure of A Voltage-Gated K+ Channel Pore Module in A Closed State in Lipid Membranes, Tetragonal Crystal Form within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K203

b:93.2
occ:0.25
O A:THR57 2.9 80.4 1.0
K A:K202 3.9 67.5 0.2
OG1 A:THR57 3.9 93.7 1.0
C A:THR57 4.0 80.9 1.0
CB A:THR57 4.3 91.8 1.0
CA A:THR57 4.8 79.2 1.0

Reference:

J.S.Santos, G.A.Asmar-Rovira, G.W.Han, W.Liu, R.Syeda, V.Cherezov, K.A.Baker, R.C.Stevens, M.Montal. Crystal Structure of A Voltage-Gated K+ Channel Pore Module in A Closed State in Lipid Membranes. J.Biol.Chem. V. 287 43063 2012.
ISSN: ISSN 0021-9258
PubMed: 23095758
DOI: 10.1074/JBC.M112.415091
Page generated: Mon Aug 12 10:51:47 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy