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Potassium in PDB 4gx1: Crystal Structure of the Gsuk Bound to Adp

Protein crystallography data

The structure of Crystal Structure of the Gsuk Bound to Adp, PDB code: 4gx1 was solved by C.Kong, W.Zeng, S.Ye, L.Chen, D.B.Sauer, Y.Lam, M.G.Derebe, Y.Jiang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 41.47 / 2.80
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 234.323, 111.442, 164.743, 90.00, 134.93, 90.00
R / Rfree (%) 21.2 / 25.5

Other elements in 4gx1:

The structure of Crystal Structure of the Gsuk Bound to Adp also contains other interesting chemical elements:

Calcium (Ca) 4 atoms
Zinc (Zn) 4 atoms

Potassium Binding Sites:

Pages:

>>> Page 1 <<< Page 2, Binding sites: 11 - 11;

Binding sites:

The binding sites of Potassium atom in the Crystal Structure of the Gsuk Bound to Adp (pdb code 4gx1). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total 11 binding sites of Potassium where determined in the Crystal Structure of the Gsuk Bound to Adp, PDB code: 4gx1:
Jump to Potassium binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Potassium binding site 1 out of 11 in 4gx1

Go back to Potassium Binding Sites List in 4gx1
Potassium binding site 1 out of 11 in the Crystal Structure of the Gsuk Bound to Adp


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of Crystal Structure of the Gsuk Bound to Adp within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K601

b:55.1
occ:0.50
 O B:LEU69 2.7 54.0 1.0
O A:LEU69 2.7 62.8 1.0
K A:K602 2.9 48.0 0.5
O B:GLY70 3.0 63.6 1.0
O A:GLY70 3.1 58.7 1.0
C A:GLY70 3.6 63.2 1.0
K B:K601 3.7 75.1 0.5
C B:GLY70 3.7 61.1 1.0
C A:LEU69 3.8 60.7 1.0
C B:LEU69 3.8 56.8 1.0
CA A:GLY70 3.8 61.6 1.0
CA B:GLY70 4.0 60.3 1.0
N A:GLY70 4.3 59.0 1.0
N B:GLY70 4.4 59.0 1.0
N A:PHE71 4.6 62.8 1.0
N B:PHE71 4.7 57.9 1.0
O A:THR68 4.9 55.2 1.0

Potassium binding site 2 out of 11 in 4gx1

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Potassium binding site 2 out of 11 in the Crystal Structure of the Gsuk Bound to Adp


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 2 of Crystal Structure of the Gsuk Bound to Adp within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K602

b:48.0
occ:0.50
 O A:LEU69 2.5 62.8 1.0
O B:LEU69 2.8 54.0 1.0
O A:THR68 2.9 55.2 1.0
K A:K601 2.9 55.1 0.5
O B:THR68 2.9 47.5 1.0
C A:LEU69 3.5 60.7 1.0
C B:LEU69 3.7 56.8 1.0
C A:THR68 4.0 57.8 1.0
C B:THR68 4.0 54.1 1.0
CA A:LEU69 4.1 59.6 1.0
CA B:LEU69 4.1 57.3 1.0
K A:K603 4.3 0.0 0.5
N A:GLY70 4.5 59.0 1.0
N A:LEU69 4.5 57.8 1.0
N B:LEU69 4.6 56.2 1.0
N B:GLY70 4.7 59.0 1.0
CA A:GLY70 4.8 61.6 1.0

Potassium binding site 3 out of 11 in 4gx1

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Potassium binding site 3 out of 11 in the Crystal Structure of the Gsuk Bound to Adp


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 3 of Crystal Structure of the Gsuk Bound to Adp within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K603

b:0.0
occ:0.50
 OG1 A:THR68 3.9 74.5 1.0
OG1 B:THR68 3.9 75.0 1.0
O B:THR68 3.9 47.5 1.0
O A:THR68 4.0 55.2 1.0
CB A:THR68 4.1 68.9 1.0
CB B:THR68 4.1 67.0 1.0
K A:K602 4.3 48.0 0.5
C A:THR68 4.7 57.8 1.0
C B:THR68 4.8 54.1 1.0
CG2 A:THR68 5.0 67.1 1.0

Potassium binding site 4 out of 11 in 4gx1

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Potassium binding site 4 out of 11 in the Crystal Structure of the Gsuk Bound to Adp


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 4 of Crystal Structure of the Gsuk Bound to Adp within 5.0Å range:
probe atom residue distance (Å) B Occ
B:K601

b:75.1
occ:0.50
 O B:PHE71 2.8 57.3 1.0
O A:GLY70 3.0 58.7 1.0
O B:GLY70 3.0 63.6 1.0
O A:PHE71 3.1 52.4 1.0
C B:PHE71 3.5 57.6 1.0
C A:PHE71 3.6 54.2 1.0
K A:K601 3.7 55.1 0.5
C A:GLY70 4.1 63.2 1.0
C B:GLY70 4.1 61.1 1.0
CA B:PHE71 4.1 58.7 1.0
CA A:PHE71 4.1 57.3 1.0
N A:GLY72 4.2 51.8 1.0
N B:GLY72 4.3 56.5 1.0
CA A:GLY72 4.5 51.8 1.0
CA B:GLY72 4.5 58.7 1.0
N B:PHE71 4.6 57.9 1.0
N A:PHE71 4.6 62.8 1.0
K B:K602 4.6 0.6 0.5

Potassium binding site 5 out of 11 in 4gx1

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Potassium binding site 5 out of 11 in the Crystal Structure of the Gsuk Bound to Adp


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 5 of Crystal Structure of the Gsuk Bound to Adp within 5.0Å range:
probe atom residue distance (Å) B Occ
B:K602

b:0.6
occ:0.50
 O B:PHE71 4.2 57.3 1.0
O A:PHE71 4.3 52.4 1.0
O B:GLY72 4.6 59.9 1.0
K B:K601 4.6 75.1 0.5
O A:GLY72 4.6 55.4 1.0
C B:GLY72 4.8 59.0 1.0
C A:GLY72 4.9 55.1 1.0
CA B:GLY72 4.9 58.7 1.0

Potassium binding site 6 out of 11 in 4gx1

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Potassium binding site 6 out of 11 in the Crystal Structure of the Gsuk Bound to Adp


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 6 of Crystal Structure of the Gsuk Bound to Adp within 5.0Å range:

Potassium binding site 7 out of 11 in 4gx1

Go back to Potassium Binding Sites List in 4gx1
Potassium binding site 7 out of 11 in the Crystal Structure of the Gsuk Bound to Adp


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 7 of Crystal Structure of the Gsuk Bound to Adp within 5.0Å range:
probe atom residue distance (Å) B Occ
C:K601

b:54.1
occ:0.50
 O D:THR68 2.5 61.1 1.0
O C:THR68 2.8 56.1 1.0
O D:LEU69 3.1 58.8 1.0
O C:LEU69 3.5 51.4 1.0
C D:THR68 3.6 57.6 1.0
K C:K602 3.6 55.8 0.5
K D:K601 3.7 0.5 0.5
C D:LEU69 3.8 56.5 1.0
C C:THR68 3.9 55.8 1.0
CA D:LEU69 4.0 55.5 1.0
C C:LEU69 4.0 50.7 1.0
CA C:LEU69 4.2 50.4 1.0
N D:LEU69 4.2 55.4 1.0
N C:LEU69 4.5 53.0 1.0
CA D:THR68 4.8 58.8 1.0
CB D:THR68 4.8 62.6 1.0
N C:GLY70 4.9 51.1 1.0
N D:GLY70 4.9 57.5 1.0
CD2 D:LEU69 5.0 60.4 1.0
CB C:THR68 5.0 67.1 1.0

Potassium binding site 8 out of 11 in 4gx1

Go back to Potassium Binding Sites List in 4gx1
Potassium binding site 8 out of 11 in the Crystal Structure of the Gsuk Bound to Adp


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 8 of Crystal Structure of the Gsuk Bound to Adp within 5.0Å range:
probe atom residue distance (Å) B Occ
C:K602

b:55.8
occ:0.50
 O D:LEU69 2.6 58.8 1.0
O D:GLY70 2.9 62.1 1.0
O C:LEU69 3.0 51.4 1.0
O C:GLY70 3.1 55.0 1.0
K C:K603 3.3 71.2 0.5
C D:GLY70 3.6 61.3 1.0
K C:K601 3.6 54.1 0.5
C C:GLY70 3.7 55.0 1.0
C D:LEU69 3.8 56.5 1.0
CA C:GLY70 4.0 52.1 1.0
CA D:GLY70 4.0 59.6 1.0
C C:LEU69 4.1 50.7 1.0
N D:GLY70 4.4 57.5 1.0
N C:GLY70 4.5 51.1 1.0
N D:PHE71 4.6 61.9 1.0
N C:PHE71 4.7 56.6 1.0
O D:THR68 4.9 61.1 1.0
CA D:LEU69 5.0 55.5 1.0

Potassium binding site 9 out of 11 in 4gx1

Go back to Potassium Binding Sites List in 4gx1
Potassium binding site 9 out of 11 in the Crystal Structure of the Gsuk Bound to Adp


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 9 of Crystal Structure of the Gsuk Bound to Adp within 5.0Å range:
probe atom residue distance (Å) B Occ
C:K603

b:71.2
occ:0.50
 O D:GLY70 2.8 62.1 1.0
O C:GLY70 3.0 55.0 1.0
K C:K602 3.3 55.8 0.5
O D:PHE71 3.3 63.8 1.0
O C:PHE71 3.4 57.3 1.0
C D:PHE71 3.5 60.9 1.0
C C:PHE71 3.7 55.0 1.0
C D:GLY70 3.9 61.3 1.0
CA D:PHE71 4.0 61.8 1.0
C C:GLY70 4.1 55.0 1.0
N D:GLY72 4.1 58.0 1.0
N C:GLY72 4.2 51.3 1.0
CA C:PHE71 4.3 58.4 1.0
N D:PHE71 4.4 61.9 1.0
CA C:GLY72 4.5 51.4 1.0
CA D:GLY72 4.6 60.0 1.0
N C:PHE71 4.7 56.6 1.0
K D:K602 4.9 0.5 0.5

Potassium binding site 10 out of 11 in 4gx1

Go back to Potassium Binding Sites List in 4gx1
Potassium binding site 10 out of 11 in the Crystal Structure of the Gsuk Bound to Adp


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 10 of Crystal Structure of the Gsuk Bound to Adp within 5.0Å range:
probe atom residue distance (Å) B Occ
D:K601

b:0.5
occ:0.50
 OG1 D:THR68 3.6 71.2 1.0
K C:K601 3.7 54.1 0.5
OG1 C:THR68 3.9 73.7 1.0
CB D:THR68 4.0 62.6 1.0
O D:THR68 4.0 61.1 1.0
CB C:THR68 4.1 67.1 1.0
O C:THR68 4.2 56.1 1.0
C D:THR68 4.6 57.6 1.0
C C:THR68 4.8 55.8 1.0
CA D:THR68 4.9 58.8 1.0
O D:THR67 5.0 58.4 1.0

Reference:

C.Kong, W.Zeng, S.Ye, L.Chen, D.B.Sauer, Y.Lam, M.G.Derebe, Y.Jiang. Distinct Gating Mechanisms Revealed By the Structures of A Multi-Ligand Gated K(+) Channel. Elife V. 1 00184 2012.
PubMed: 23240087
DOI: 10.7554/ELIFE.00184
Page generated: Sat Aug 9 06:53:49 2025

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