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Potassium in PDB 4a3u: X-Structure of the Old Yellow Enzyme Homologue From Zymomonas Mobilis (Ncr)

Protein crystallography data

The structure of X-Structure of the Old Yellow Enzyme Homologue From Zymomonas Mobilis (Ncr), PDB code: 4a3u was solved by H.W.Hoeffken, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 43.06 / 1.70
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 52.600, 90.500, 76.600, 90.00, 108.30, 90.00
R / Rfree (%) 23.9 / 30.3

Other elements in 4a3u:

The structure of X-Structure of the Old Yellow Enzyme Homologue From Zymomonas Mobilis (Ncr) also contains other interesting chemical elements:

Sodium (Na) 3 atoms

Potassium Binding Sites:

The binding sites of Potassium atom in the X-Structure of the Old Yellow Enzyme Homologue From Zymomonas Mobilis (Ncr) (pdb code 4a3u). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total 2 binding sites of Potassium where determined in the X-Structure of the Old Yellow Enzyme Homologue From Zymomonas Mobilis (Ncr), PDB code: 4a3u:
Jump to Potassium binding site number: 1; 2;

Potassium binding site 1 out of 2 in 4a3u

Go back to Potassium Binding Sites List in 4a3u
Potassium binding site 1 out of 2 in the X-Structure of the Old Yellow Enzyme Homologue From Zymomonas Mobilis (Ncr)


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of X-Structure of the Old Yellow Enzyme Homologue From Zymomonas Mobilis (Ncr) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K1361

b:52.8
occ:1.00
O A:HOH2057 2.3 22.1 1.0
O A:HOH2144 2.6 13.4 1.0
O A:LEU126 2.8 11.2 1.0
OH A:TYR136 3.2 10.8 1.0
O A:HOH2137 3.4 18.8 1.0
C A:LEU126 3.8 10.6 1.0
CA A:GLY127 4.1 11.3 1.0
CZ A:TYR136 4.3 10.7 1.0
N A:GLY127 4.4 10.9 1.0
ND1 A:HIS128 4.5 13.7 1.0
CE2 A:TYR136 4.6 10.8 1.0
O A:HOH2136 4.7 23.3 1.0
N A:HIS128 4.8 11.7 1.0
NE2 A:GLN232 4.8 11.1 1.0
CE1 A:HIS128 4.8 13.4 1.0
N A:LEU126 4.9 10.3 1.0
CA A:LEU126 4.9 10.5 1.0
C A:GLY127 4.9 11.8 1.0

Potassium binding site 2 out of 2 in 4a3u

Go back to Potassium Binding Sites List in 4a3u
Potassium binding site 2 out of 2 in the X-Structure of the Old Yellow Enzyme Homologue From Zymomonas Mobilis (Ncr)


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 2 of X-Structure of the Old Yellow Enzyme Homologue From Zymomonas Mobilis (Ncr) within 5.0Å range:
probe atom residue distance (Å) B Occ
B:K1362

b:28.1
occ:1.00
O B:HOH2013 2.4 13.0 1.0
O B:HOH2015 2.8 10.5 1.0
O B:HOH2069 2.8 10.5 1.0
O B:ALA47 3.1 10.6 1.0
O B:ALA49 3.5 9.9 1.0
O B:HOH2070 3.7 8.5 1.0
O B:GLY92 3.7 12.3 1.0
CA B:GLY93 3.9 11.3 1.0
O B:SER48 3.9 9.6 1.0
O B:HOH2043 4.0 10.8 1.0
C B:SER48 4.0 10.8 1.0
CA B:SER48 4.1 11.2 1.0
CD B:LYS16 4.1 18.0 1.0
C B:ALA49 4.2 10.4 1.0
CB B:LYS16 4.2 15.7 1.0
CG B:LYS16 4.2 16.7 1.0
C B:ALA47 4.2 11.7 1.0
CA B:GLY50 4.4 9.2 1.0
C B:GLY92 4.4 12.7 1.0
O B:GLY50 4.4 8.6 1.0
N B:GLY93 4.6 11.8 1.0
N B:GLY50 4.6 10.0 1.0
C B:GLY50 4.7 8.6 1.0
N B:ALA49 4.7 10.7 1.0
N B:SER48 4.7 11.5 1.0
C B:GLY93 4.8 10.6 1.0
CE B:LYS16 4.8 18.3 1.0
N B:LYS16 4.9 15.2 1.0
N B:LEU94 4.9 10.2 1.0

Reference:

S.Reich, H.W.Hoeffken, B.Rosche, B.M.Nestl, B.Hauer. Crystal Structure Determination and Mutagenesis Analysis of the Ene Reductase Ncr. Chembiochem V. 13 2400 2012.
ISSN: ISSN 1439-4227
PubMed: 23033175
DOI: 10.1002/CBIC.201200404
Page generated: Mon Aug 12 10:01:19 2024

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