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Potassium in PDB 3wnw: Structure of Mouse H-Chain Modified Ferritin

Enzymatic activity of Structure of Mouse H-Chain Modified Ferritin

All present enzymatic activity of Structure of Mouse H-Chain Modified Ferritin:
1.16.3.1;

Protein crystallography data

The structure of Structure of Mouse H-Chain Modified Ferritin, PDB code: 3wnw was solved by R.Zarivach, L.Lewin, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 49.86 / 2.24
Space group P 42 21 2
Cell size a, b, c (Å), α, β, γ (°) 218.145, 218.145, 147.690, 90.00, 90.00, 90.00
R / Rfree (%) 22 / 26.5

Other elements in 3wnw:

The structure of Structure of Mouse H-Chain Modified Ferritin also contains other interesting chemical elements:

Magnesium (Mg) 20 atoms
Iron (Fe) 4 atoms

Potassium Binding Sites:

The binding sites of Potassium atom in the Structure of Mouse H-Chain Modified Ferritin (pdb code 3wnw). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total 2 binding sites of Potassium where determined in the Structure of Mouse H-Chain Modified Ferritin, PDB code: 3wnw:
Jump to Potassium binding site number: 1; 2;

Potassium binding site 1 out of 2 in 3wnw

Go back to Potassium Binding Sites List in 3wnw
Potassium binding site 1 out of 2 in the Structure of Mouse H-Chain Modified Ferritin


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of Structure of Mouse H-Chain Modified Ferritin within 5.0Å range:
probe atom residue distance (Å) B Occ
B:K203

b:40.3
occ:1.00
O B:HOH333 2.5 17.6 1.0
O B:ASN11 2.8 10.6 1.0
O B:HOH315 2.8 8.0 1.0
O B:LYS124 3.0 13.2 1.0
OD1 B:ASN11 3.2 12.5 1.0
C B:ASN11 3.4 11.1 1.0
CB B:LYS124 3.6 18.4 1.0
CG B:ASN11 3.7 12.4 1.0
CB B:ASP126 3.8 17.0 1.0
O B:HOH417 3.9 26.4 1.0
N B:HIS13 3.9 12.6 1.0
C B:LYS124 3.9 15.9 1.0
N B:TYR12 4.0 10.9 1.0
ND2 B:ASN11 4.0 11.9 1.0
CA B:ASN11 4.1 11.5 1.0
CA B:TYR12 4.2 11.3 1.0
OD2 B:ASP126 4.2 22.3 1.0
O B:ASN125 4.3 14.9 1.0
CB B:HIS13 4.3 14.0 1.0
CG B:ASP126 4.3 20.0 1.0
CA B:ASP126 4.3 14.9 1.0
CA B:LYS124 4.3 16.8 1.0
C B:TYR12 4.4 11.4 1.0
C B:ASN125 4.4 16.6 1.0
N B:ASP126 4.4 15.4 1.0
CB B:ASN11 4.5 11.7 1.0
CA B:HIS13 4.6 13.2 1.0
CG B:LYS124 4.7 19.9 1.0
N B:ASN125 4.9 16.4 1.0

Potassium binding site 2 out of 2 in 3wnw

Go back to Potassium Binding Sites List in 3wnw
Potassium binding site 2 out of 2 in the Structure of Mouse H-Chain Modified Ferritin


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 2 of Structure of Mouse H-Chain Modified Ferritin within 5.0Å range:
probe atom residue distance (Å) B Occ
C:K206

b:53.2
occ:1.00
O C:HOH343 2.4 32.6 1.0
OH C:TYR40 2.8 9.3 1.0
OD1 C:ASP92 3.2 19.5 1.0
OD2 C:ASP92 3.2 22.7 1.0
O C:HOH357 3.4 17.6 1.0
CG C:ASP92 3.6 20.0 1.0
CZ C:TYR40 3.7 10.3 1.0
CE1 C:TYR40 3.7 10.3 1.0
CA C:GLU94 4.4 15.3 1.0
O C:GLU94 4.5 13.0 1.0
NH2 C:ARG43 4.6 14.9 1.0
N C:GLU94 4.7 13.3 1.0
C C:GLU94 4.8 14.1 1.0
O C:HOH388 4.8 14.4 1.0
NH1 C:ARG43 4.9 13.8 1.0
CZ C:ARG43 4.9 14.2 1.0
CE2 C:TYR40 5.0 9.9 1.0

Reference:

R.Zarivach, L.Lewin. Studies of Ferritin-M6A To Be Published.
Page generated: Sun Dec 13 23:24:46 2020

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