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Potassium in PDB 3ves: Crystal Structure of the O-Carbamoyltransferase Tobz in Complex with Ampcpp and Carbamoyl Phosphate

Protein crystallography data

The structure of Crystal Structure of the O-Carbamoyltransferase Tobz in Complex with Ampcpp and Carbamoyl Phosphate, PDB code: 3ves was solved by C.Parthier, M.T.Stubbs, S.Goerlich, F.Jaenecke, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 33.98 / 2.23
Space group P 61 2 2
Cell size a, b, c (Å), α, β, γ (°) 98.741, 98.741, 281.099, 90.00, 90.00, 120.00
R / Rfree (%) 18.3 / 23.2

Other elements in 3ves:

The structure of Crystal Structure of the O-Carbamoyltransferase Tobz in Complex with Ampcpp and Carbamoyl Phosphate also contains other interesting chemical elements:

Manganese (Mn) 1 atom
Iron (Fe) 1 atom

Potassium Binding Sites:

The binding sites of Potassium atom in the Crystal Structure of the O-Carbamoyltransferase Tobz in Complex with Ampcpp and Carbamoyl Phosphate (pdb code 3ves). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total only one binding site of Potassium was determined in the Crystal Structure of the O-Carbamoyltransferase Tobz in Complex with Ampcpp and Carbamoyl Phosphate, PDB code: 3ves:

Potassium binding site 1 out of 1 in 3ves

Go back to Potassium Binding Sites List in 3ves
Potassium binding site 1 out of 1 in the Crystal Structure of the O-Carbamoyltransferase Tobz in Complex with Ampcpp and Carbamoyl Phosphate


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of Crystal Structure of the O-Carbamoyltransferase Tobz in Complex with Ampcpp and Carbamoyl Phosphate within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K604

b:0.0
occ:1.00
O A:VAL327 3.7 51.1 1.0
O A:LEU322 3.8 40.6 1.0
O A:ARG324 4.0 43.0 1.0
O A:THR323 4.1 46.8 1.0
C A:THR323 4.2 44.6 1.0
CA A:THR323 4.4 48.1 1.0
C A:ARG324 4.7 42.4 1.0
N A:ARG324 4.8 39.9 1.0
C A:LEU322 4.9 45.0 1.0
C A:VAL327 4.9 44.6 1.0

Reference:

C.Parthier, S.Gorlich, F.Jaenecke, C.Breithaupt, U.Brauer, U.Fandrich, D.Clausnitzer, U.F.Wehmeier, C.Bottcher, D.Scheel, M.T.Stubbs. The O-Carbamoyltransferase Tobz Catalyzes An Ancient Enzymatic Reaction. Angew.Chem.Int.Ed.Engl. V. 51 4046 2012.
ISSN: ISSN 1433-7851
PubMed: 22383337
DOI: 10.1002/ANIE.201108896
Page generated: Mon Aug 12 09:48:05 2024

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