Potassium in PDB 3rih: Crystal Structure of A Putative Short Chain Dehydrogenase or Reductase From Mycobacterium Abscessus

The structure of Crystal Structure of A Putative Short Chain Dehydrogenase or Reductase From Mycobacterium Abscessus, PDB code: 3rih was solved by Seattle Structural Genomics Center For Infectious Disease (Ssgcid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	50.00 / 2.15
Space group	P 43 21 2
Cell size a, b, c (Å), α, β, γ (°)	208.550, 208.550, 94.670, 90.00, 90.00, 90.00
R / Rfree (%)	15.4 / 17.8

The binding sites of Potassium atom in the Crystal Structure of A Putative Short Chain Dehydrogenase or Reductase From Mycobacterium Abscessus (pdb code 3rih). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total 4 binding sites of Potassium where determined in the Crystal Structure of A Putative Short Chain Dehydrogenase or Reductase From Mycobacterium Abscessus, PDB code: 3rih:
Jump to Potassium binding site number: 1; 2; 3; 4;

Potassium binding site 1 out of 4 in the Crystal Structure of A Putative Short Chain Dehydrogenase or Reductase From Mycobacterium Abscessus


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of Crystal Structure of A Putative Short Chain Dehydrogenase or Reductase From Mycobacterium Abscessus within 5.0Å range: probe atom residue distance (Å) B Occ A:K272 b:33.4 occ:1.00 O A:GLY64 2.4 26.2 1.0 O A:GLY67 2.4 24.1 1.0 O A:GLY69 2.5 19.5 1.0 O A:HOH498 2.7 9.7 1.0 O A:HOH367 2.7 23.8 1.0 O A:HOH324 2.7 20.0 1.0 C A:GLY64 3.5 26.3 1.0 C A:GLY67 3.5 24.1 1.0 C A:GLY69 3.7 20.0 1.0 N A:GLY69 3.9 21.9 1.0 C A:ALA68 4.0 23.1 1.0 CA A:GLY64 4.1 25.3 1.0 N A:GLY67 4.2 24.1 1.0 O A:HOH374 4.2 35.3 1.0 N A:ALA68 4.3 23.8 1.0 CA A:ALA68 4.3 24.1 1.0 O A:ALA68 4.3 24.1 1.0 O A:HOH499 4.4 12.0 1.0 CA A:GLY69 4.4 20.5 1.0 CA A:GLY67 4.5 23.8 1.0 N A:GLU65 4.5 26.7 1.0 CA A:GLU65 4.7 28.3 1.0 N A:ASN70 4.8 19.0 1.0 N A:LEU66 4.9 25.8 1.0 C A:GLU65 4.9 27.4 1.0 O A:LEU63 4.9 24.3 1.0 CG2 A:VAL71 5.0 15.4 1.0

Potassium binding site 2 out of 4 in the Crystal Structure of A Putative Short Chain Dehydrogenase or Reductase From Mycobacterium Abscessus


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 2 of Crystal Structure of A Putative Short Chain Dehydrogenase or Reductase From Mycobacterium Abscessus within 5.0Å range: probe atom residue distance (Å) B Occ B:K272 b:31.8 occ:1.00 O B:GLY67 2.4 24.8 1.0 O B:GLY64 2.5 26.9 1.0 O B:GLY69 2.5 19.4 1.0 O B:HOH598 2.6 19.9 1.0 O B:HOH500 2.6 19.9 1.0 O B:HOH308 2.7 10.9 1.0 C B:GLY64 3.5 27.4 1.0 C B:GLY67 3.6 25.1 1.0 C B:GLY69 3.7 20.6 1.0 N B:GLY69 3.9 22.8 1.0 C B:ALA68 4.0 24.4 1.0 CA B:GLY64 4.1 26.5 1.0 O B:HOH600 4.2 36.6 1.0 N B:GLY67 4.3 25.6 1.0 O B:HOH297 4.3 10.3 1.0 CA B:ALA68 4.3 25.1 1.0 N B:ALA68 4.4 24.9 1.0 O B:ALA68 4.4 25.0 1.0 CA B:GLY69 4.4 21.1 1.0 O B:HOH597 4.5 35.5 1.0 N B:GLU65 4.5 27.5 1.0 CA B:GLY67 4.5 25.0 1.0 N B:ASN70 4.8 19.8 1.0 CA B:GLU65 4.8 28.8 1.0 C B:GLU65 4.9 28.1 1.0 O B:LEU63 4.9 26.2 1.0 N B:LEU66 5.0 26.7 1.0

Potassium binding site 3 out of 4 in the Crystal Structure of A Putative Short Chain Dehydrogenase or Reductase From Mycobacterium Abscessus


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 3 of Crystal Structure of A Putative Short Chain Dehydrogenase or Reductase From Mycobacterium Abscessus within 5.0Å range: probe atom residue distance (Å) B Occ C:K272 b:50.6 occ:1.00 O C:GLY64 2.3 37.4 1.0 O C:GLY69 2.5 32.1 1.0 O C:GLY67 2.6 34.4 1.0 O C:HOH356 2.8 17.7 1.0 C C:GLY64 3.4 37.3 1.0 C C:GLY67 3.7 34.4 1.0 C C:GLY69 3.7 32.3 1.0 N C:GLY69 4.0 33.7 1.0 C C:ALA68 4.2 34.5 1.0 CA C:GLY64 4.2 36.5 1.0 N C:GLY67 4.4 34.6 1.0 N C:ALA68 4.4 34.5 1.0 O C:HOH297 4.4 17.4 1.0 N C:GLU65 4.4 38.0 1.0 CA C:ALA68 4.4 34.7 1.0 O C:HOH323 4.5 36.8 1.0 CA C:GLY69 4.5 32.6 1.0 CA C:GLU65 4.6 39.3 1.0 CA C:GLY67 4.6 34.0 1.0 O C:ALA68 4.6 35.0 1.0 O C:LEU63 4.7 33.8 1.0 N C:ASN70 4.7 32.1 1.0 C C:GLU65 4.9 38.4 1.0 CA C:ASN70 4.9 32.5 1.0 N C:LEU66 4.9 37.1 1.0

Potassium binding site 4 out of 4 in the Crystal Structure of A Putative Short Chain Dehydrogenase or Reductase From Mycobacterium Abscessus


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 4 of Crystal Structure of A Putative Short Chain Dehydrogenase or Reductase From Mycobacterium Abscessus within 5.0Å range: probe atom residue distance (Å) B Occ D:K272 b:50.2 occ:1.00 O D:GLY69 2.4 25.4 1.0 O D:GLY64 2.5 31.3 1.0 O D:GLY67 2.5 27.3 1.0 O D:HOH308 2.7 15.0 1.0 O D:HOH761 2.8 34.1 1.0 C D:GLY64 3.5 31.2 1.0 C D:GLY67 3.6 28.1 1.0 C D:GLY69 3.7 26.6 1.0 CA D:GLY64 4.0 29.7 1.0 N D:GLY69 4.0 27.2 1.0 C D:ALA68 4.1 28.2 1.0 O D:HOH293 4.3 12.2 1.0 O D:HOH763 4.3 27.4 1.0 N D:GLY67 4.3 28.8 1.0 CA D:GLY69 4.5 26.2 1.0 N D:ALA68 4.5 27.9 1.0 CA D:ALA68 4.5 28.4 1.0 O D:ALA68 4.5 28.9 1.0 N D:GLU65 4.6 32.4 1.0 CA D:GLY67 4.6 28.0 1.0 N D:ASN70 4.6 26.7 1.0 CA D:ASN70 4.7 27.5 1.0 O D:LEU63 4.8 26.9 1.0 N D:LEU66 4.9 31.8 1.0 C D:GLU65 5.0 33.3 1.0

L.Baugh, I.Phan, D.W.Begley, M.C.Clifton, B.Armour, D.M.Dranow, B.M.Taylor, M.M.Muruthi, J.Abendroth, J.W.Fairman, D.Fox, S.H.Dieterich, B.L.Staker, A.S.Gardberg, R.Choi, S.N.Hewitt, A.J.Napuli, J.Myers, L.K.Barrett, Y.Zhang, M.Ferrell, E.Mundt, K.Thompkins, N.Tran, S.Lyons-Abbott, A.Abramov, A.Sekar, D.Serbzhinskiy, D.Lorimer, G.W.Buchko, R.Stacy, L.J.Stewart, T.E.Edwards, W.C.Van Voorhis, P.J.Myler. Increasing the Structural Coverage of Tuberculosis Drug Targets. Tuberculosis (Edinb) V. 95 142 2015.
ISSN: ISSN 1472-9792
PubMed: 25613812
DOI: 10.1016/J.TUBE.2014.12.003