Atomistry » Potassium » PDB 3q9c-3rs8 » 3r65
Atomistry »
  Potassium »
    PDB 3q9c-3rs8 »
      3r65 »

Potassium in PDB 3r65: Mthk Channel Pore E92Q Mutant

Protein crystallography data

The structure of Mthk Channel Pore E92Q Mutant, PDB code: 3r65 was solved by N.Shi, W.Zeng, S.Ye, Y.Li, Y.Jiang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 31.43 / 1.80
Space group P 4 21 2
Cell size a, b, c (Å), α, β, γ (°) 63.560, 63.560, 43.973, 90.00, 90.00, 90.00
R / Rfree (%) 20.5 / 22.5

Potassium Binding Sites:

The binding sites of Potassium atom in the Mthk Channel Pore E92Q Mutant (pdb code 3r65). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total 4 binding sites of Potassium where determined in the Mthk Channel Pore E92Q Mutant, PDB code: 3r65:
Jump to Potassium binding site number: 1; 2; 3; 4;

Potassium binding site 1 out of 4 in 3r65

Go back to Potassium Binding Sites List in 3r65
Potassium binding site 1 out of 4 in the Mthk Channel Pore E92Q Mutant


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of Mthk Channel Pore E92Q Mutant within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K1

b:22.6
occ:0.25
O A:TYR62 2.8 16.4 1.0
O A:GLY61 3.1 16.2 1.0
K A:K2 3.2 28.4 0.2
C A:TYR62 3.5 17.1 1.0
CA A:TYR62 4.1 16.6 1.0
C A:GLY61 4.2 16.7 1.0
N A:GLY63 4.3 16.9 1.0
CA A:GLY63 4.6 17.5 1.0
N A:TYR62 4.7 16.0 1.0
O A:HOH8 4.8 37.6 1.0

Potassium binding site 2 out of 4 in 3r65

Go back to Potassium Binding Sites List in 3r65
Potassium binding site 2 out of 4 in the Mthk Channel Pore E92Q Mutant


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 2 of Mthk Channel Pore E92Q Mutant within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K2

b:28.4
occ:0.25
O A:GLY61 2.8 16.2 1.0
K A:K3 3.0 19.4 0.2
O A:VAL60 3.0 16.1 1.0
K A:K1 3.2 22.6 0.2
C A:GLY61 3.7 16.7 1.0
C A:VAL60 4.1 16.8 1.0
CA A:GLY61 4.2 16.4 1.0
N A:TYR62 4.6 16.0 1.0
N A:GLY61 4.6 16.4 1.0
CA A:TYR62 4.8 16.6 1.0

Potassium binding site 3 out of 4 in 3r65

Go back to Potassium Binding Sites List in 3r65
Potassium binding site 3 out of 4 in the Mthk Channel Pore E92Q Mutant


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 3 of Mthk Channel Pore E92Q Mutant within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K3

b:19.4
occ:0.25
O A:THR59 2.8 17.4 1.0
O A:VAL60 2.9 16.1 1.0
K A:K2 3.0 28.4 0.2
K A:K4 3.5 17.4 0.2
C A:VAL60 3.7 16.8 1.0
C A:THR59 4.0 16.6 1.0
CA A:VAL60 4.2 16.4 1.0
N A:VAL60 4.6 16.4 1.0
N A:GLY61 4.6 16.4 1.0
CA A:GLY61 5.0 16.4 1.0
O A:GLY61 5.0 16.2 1.0

Potassium binding site 4 out of 4 in 3r65

Go back to Potassium Binding Sites List in 3r65
Potassium binding site 4 out of 4 in the Mthk Channel Pore E92Q Mutant


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 4 of Mthk Channel Pore E92Q Mutant within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K4

b:17.4
occ:0.25
OG1 A:THR59 2.8 17.5 1.0
O A:THR59 3.0 17.4 1.0
K A:K3 3.5 19.4 0.2
CB A:THR59 3.6 16.8 1.0
C A:THR59 3.9 16.6 1.0
CA A:THR59 4.4 16.6 1.0
CG2 A:THR59 4.8 17.0 1.0
N A:VAL60 4.9 16.4 1.0

Reference:

N.Shi, W.Zeng, S.Ye, Y.Li, Y.Jiang. Crucial Points Within the Pore As Determinants of K+ Channel Conductance and Gating J.Mol.Biol. V. 411 27 2011.
ISSN: ISSN 0022-2836
PubMed: 21554888
DOI: 10.1016/J.JMB.2011.04.058
Page generated: Mon Aug 12 09:17:36 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy