Atomistry » Potassium » PDB 3oyt-3q9b » 3p0z
Atomistry »
  Potassium »
    PDB 3oyt-3q9b »
      3p0z »

Potassium in PDB 3p0z: Crystal Structure of 2-C-Methyl-D-Erythritol 2,4-Cyclodiphosphate Synthase From Burkholderia Pseudomallei with Cytidine and FOL955, 4- (1H-Imidazol)-1-Yl)Phenol

Enzymatic activity of Crystal Structure of 2-C-Methyl-D-Erythritol 2,4-Cyclodiphosphate Synthase From Burkholderia Pseudomallei with Cytidine and FOL955, 4- (1H-Imidazol)-1-Yl)Phenol

All present enzymatic activity of Crystal Structure of 2-C-Methyl-D-Erythritol 2,4-Cyclodiphosphate Synthase From Burkholderia Pseudomallei with Cytidine and FOL955, 4- (1H-Imidazol)-1-Yl)Phenol:
4.6.1.12;

Protein crystallography data

The structure of Crystal Structure of 2-C-Methyl-D-Erythritol 2,4-Cyclodiphosphate Synthase From Burkholderia Pseudomallei with Cytidine and FOL955, 4- (1H-Imidazol)-1-Yl)Phenol, PDB code: 3p0z was solved by Seattle Structural Genomics Center For Infectious Disease (Ssgcid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.83 / 1.95
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 117.550, 67.630, 59.770, 90.00, 95.99, 90.00
R / Rfree (%) 15.2 / 19.1

Other elements in 3p0z:

The structure of Crystal Structure of 2-C-Methyl-D-Erythritol 2,4-Cyclodiphosphate Synthase From Burkholderia Pseudomallei with Cytidine and FOL955, 4- (1H-Imidazol)-1-Yl)Phenol also contains other interesting chemical elements:

Chlorine (Cl) 1 atom
Zinc (Zn) 3 atoms

Potassium Binding Sites:

The binding sites of Potassium atom in the Crystal Structure of 2-C-Methyl-D-Erythritol 2,4-Cyclodiphosphate Synthase From Burkholderia Pseudomallei with Cytidine and FOL955, 4- (1H-Imidazol)-1-Yl)Phenol (pdb code 3p0z). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total only one binding site of Potassium was determined in the Crystal Structure of 2-C-Methyl-D-Erythritol 2,4-Cyclodiphosphate Synthase From Burkholderia Pseudomallei with Cytidine and FOL955, 4- (1H-Imidazol)-1-Yl)Phenol, PDB code: 3p0z:

Potassium binding site 1 out of 1 in 3p0z

Go back to Potassium Binding Sites List in 3p0z
Potassium binding site 1 out of 1 in the Crystal Structure of 2-C-Methyl-D-Erythritol 2,4-Cyclodiphosphate Synthase From Burkholderia Pseudomallei with Cytidine and FOL955, 4- (1H-Imidazol)-1-Yl)Phenol


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of Crystal Structure of 2-C-Methyl-D-Erythritol 2,4-Cyclodiphosphate Synthase From Burkholderia Pseudomallei with Cytidine and FOL955, 4- (1H-Imidazol)-1-Yl)Phenol within 5.0Å range:
probe atom residue distance (Å) B Occ
C:K163

b:74.3
occ:1.00
O B:HOH259 2.5 39.8 1.0
O A:HOH250 2.6 18.3 1.0
O B:HOH251 2.7 21.8 1.0
O C:HOH179 2.9 14.2 1.0
O A:HOH285 2.9 24.8 1.0
OE1 A:GLU149 4.1 16.8 1.0
OE2 A:GLU149 4.1 21.0 1.0
OE1 C:GLU149 4.2 23.1 1.0
OE2 C:GLU149 4.3 20.5 1.0
OE1 B:GLU149 4.3 18.7 1.0
OE2 B:GLU149 4.3 20.5 1.0
O A:HOH265 4.5 14.9 1.0
O C:HOH207 4.5 17.4 1.0
CD A:GLU149 4.6 19.2 1.0
CD C:GLU149 4.7 20.6 1.0
CD B:GLU149 4.7 20.7 1.0
O B:HOH215 4.8 15.8 1.0
CE2 C:TYR9 5.0 19.4 1.0

Reference:

D.W.Begley, R.C.Hartley, D.R.Davies, T.E.Edwards, J.T.Leonard, J.Abendroth, C.A.Burris, J.Bhandari, P.J.Myler, B.L.Staker, L.J.Stewart. Leveraging Structure Determination with Fragment Screening For Infectious Disease Drug Targets: Mecp Synthase From Burkholderia Pseudomallei. J Struct Funct Genomics V. 12 63 2011.
PubMed: 21359640
DOI: 10.1007/S10969-011-9102-6
Page generated: Mon Aug 12 08:58:59 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy