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Potassium in PDB 3lms: Structure of Human Activated Thrombin-Activatable Fibrinolysis Inhibitor, Tafia, in Complex with Tick-Derived Funnelin Inhibitor, Tci.

Enzymatic activity of Structure of Human Activated Thrombin-Activatable Fibrinolysis Inhibitor, Tafia, in Complex with Tick-Derived Funnelin Inhibitor, Tci.

All present enzymatic activity of Structure of Human Activated Thrombin-Activatable Fibrinolysis Inhibitor, Tafia, in Complex with Tick-Derived Funnelin Inhibitor, Tci.:
3.4.17.20;

Protein crystallography data

The structure of Structure of Human Activated Thrombin-Activatable Fibrinolysis Inhibitor, Tafia, in Complex with Tick-Derived Funnelin Inhibitor, Tci., PDB code: 3lms was solved by L.Sanglas, J.L.Arolas, Z.Valnickova, F.X.Aviles, J.J.Enghild, F.X.Gomis-Ruth, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 46.18 / 2.50
Space group P 31 2 1
Cell size a, b, c (Å), α, β, γ (°) 157.180, 157.180, 57.070, 90.00, 90.00, 120.00
R / Rfree (%) 18.5 / 21.6

Other elements in 3lms:

The structure of Structure of Human Activated Thrombin-Activatable Fibrinolysis Inhibitor, Tafia, in Complex with Tick-Derived Funnelin Inhibitor, Tci. also contains other interesting chemical elements:

Chlorine (Cl) 3 atoms
Calcium (Ca) 1 atom
Zinc (Zn) 1 atom

Potassium Binding Sites:

The binding sites of Potassium atom in the Structure of Human Activated Thrombin-Activatable Fibrinolysis Inhibitor, Tafia, in Complex with Tick-Derived Funnelin Inhibitor, Tci. (pdb code 3lms). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total 2 binding sites of Potassium where determined in the Structure of Human Activated Thrombin-Activatable Fibrinolysis Inhibitor, Tafia, in Complex with Tick-Derived Funnelin Inhibitor, Tci., PDB code: 3lms:
Jump to Potassium binding site number: 1; 2;

Potassium binding site 1 out of 2 in 3lms

Go back to Potassium Binding Sites List in 3lms
Potassium binding site 1 out of 2 in the Structure of Human Activated Thrombin-Activatable Fibrinolysis Inhibitor, Tafia, in Complex with Tick-Derived Funnelin Inhibitor, Tci.


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of Structure of Human Activated Thrombin-Activatable Fibrinolysis Inhibitor, Tafia, in Complex with Tick-Derived Funnelin Inhibitor, Tci. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K510

b:68.3
occ:1.00
NH2 A:ARG306 3.6 67.6 1.0
O A:HOH573 3.7 64.1 1.0
CZ A:ARG306 4.9 65.6 1.0

Potassium binding site 2 out of 2 in 3lms

Go back to Potassium Binding Sites List in 3lms
Potassium binding site 2 out of 2 in the Structure of Human Activated Thrombin-Activatable Fibrinolysis Inhibitor, Tafia, in Complex with Tick-Derived Funnelin Inhibitor, Tci.


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 2 of Structure of Human Activated Thrombin-Activatable Fibrinolysis Inhibitor, Tafia, in Complex with Tick-Derived Funnelin Inhibitor, Tci. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K511

b:55.8
occ:1.00
CB A:ASN16 3.4 59.5 1.0
CA A:ASN16 3.9 58.1 1.0
O A:HOH593 4.1 58.3 1.0
CD1 A:TYR19 4.2 49.5 1.0
CG A:ASN16 4.6 63.4 1.0
N A:ASN16 4.8 55.5 1.0
CB A:TYR19 4.8 54.3 1.0
OD1 A:ASN16 4.9 67.2 1.0
CG A:TYR19 4.9 51.8 1.0
CE1 A:TYR19 4.9 49.1 1.0
O A:ASN16 4.9 59.9 1.0
C A:ASN16 4.9 59.7 1.0
CE1 A:TYR45 4.9 50.2 1.0

Reference:

L.Sanglas, J.L.Arolas, Z.Valnickova, F.X.Aviles, J.J.Enghild, F.X.Gomis-Ruth. Insights Into the Molecular Inactivation Mechanism of Human Activated Thrombin-Activatable Fibrinolysis Inhibitor J.Thromb.Haemost. V. 8 1056 2010.
ISSN: ISSN 1538-7933
PubMed: 20088943
DOI: 10.1111/J.1538-7836.2010.03740.X
Page generated: Sun Dec 13 23:20:19 2020

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