Atomistry » Potassium » PDB 3du0-3f2t » 3e9c
Atomistry »
  Potassium »
    PDB 3du0-3f2t »
      3e9c »

Potassium in PDB 3e9c: Structure of A Tryptic Core Fragment of Tigar From Danio Rerio

Protein crystallography data

The structure of Structure of A Tryptic Core Fragment of Tigar From Danio Rerio, PDB code: 3e9c was solved by H.Li, G.Jogl, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.92 / 2.00
Space group P 65
Cell size a, b, c (Å), α, β, γ (°) 136.672, 136.672, 66.753, 90.00, 90.00, 120.00
R / Rfree (%) 17 / 20.9

Potassium Binding Sites:

The binding sites of Potassium atom in the Structure of A Tryptic Core Fragment of Tigar From Danio Rerio (pdb code 3e9c). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total 2 binding sites of Potassium where determined in the Structure of A Tryptic Core Fragment of Tigar From Danio Rerio, PDB code: 3e9c:
Jump to Potassium binding site number: 1; 2;

Potassium binding site 1 out of 2 in 3e9c

Go back to Potassium Binding Sites List in 3e9c
Potassium binding site 1 out of 2 in the Structure of A Tryptic Core Fragment of Tigar From Danio Rerio


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of Structure of A Tryptic Core Fragment of Tigar From Danio Rerio within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K266

b:22.5
occ:1.00
O B:LEU198 2.6 18.8 1.0
O A:HOH282 2.7 23.4 1.0
O B:VAL195 2.7 18.2 1.0
O A:PRO203 2.8 18.4 1.0
O A:LEU202 2.9 17.9 1.0
O B:GLU196 2.9 20.4 1.0
C A:LEU202 3.5 19.5 1.0
C A:PRO203 3.6 19.4 1.0
C B:GLU196 3.6 20.2 1.0
C B:LEU198 3.7 19.9 1.0
O B:HOH411 3.7 26.8 1.0
C B:VAL195 3.8 19.1 1.0
CA B:GLU196 3.8 20.3 1.0
CB A:LEU202 3.9 19.8 1.0
N A:PRO203 4.1 19.4 1.0
N B:GLU196 4.2 19.5 1.0
CA A:LEU202 4.3 19.8 1.0
CA A:PRO203 4.3 19.2 1.0
N A:ALA204 4.4 19.0 1.0
N B:CYS200 4.4 20.5 1.0
N B:LEU198 4.4 19.0 1.0
O A:LEU206 4.5 24.5 1.0
N B:GLN199 4.6 20.3 1.0
CA B:GLN199 4.6 21.3 1.0
CA A:ALA204 4.6 19.8 1.0
N B:ASP197 4.7 19.9 1.0
CA B:LEU198 4.7 19.5 1.0
C B:ASP197 4.8 19.4 1.0
CB B:CYS200 4.8 21.3 1.0
C B:GLN199 4.9 20.8 1.0
N A:LEU206 5.0 23.7 1.0
N A:LEU202 5.0 20.7 1.0
N A:GLY205 5.0 21.0 1.0

Potassium binding site 2 out of 2 in 3e9c

Go back to Potassium Binding Sites List in 3e9c
Potassium binding site 2 out of 2 in the Structure of A Tryptic Core Fragment of Tigar From Danio Rerio


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 2 of Structure of A Tryptic Core Fragment of Tigar From Danio Rerio within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K267

b:25.7
occ:1.00
O A:VAL195 2.6 20.1 1.0
O A:LEU198 2.7 22.8 1.0
O B:PRO203 2.8 20.3 1.0
O A:GLU196 3.0 22.4 1.0
O B:LEU202 3.2 21.5 1.0
O A:HOH379 3.3 38.3 1.0
C A:GLU196 3.6 23.4 1.0
C B:PRO203 3.7 21.2 1.0
C B:LEU202 3.7 21.3 1.0
C A:VAL195 3.8 21.1 1.0
C A:LEU198 3.8 23.3 1.0
CA A:GLU196 3.9 23.2 1.0
CB B:LEU202 3.9 21.5 1.0
O B:LEU206 3.9 31.5 1.0
N B:PRO203 4.2 20.8 1.0
N A:GLU196 4.3 21.6 1.0
N A:CYS200 4.3 23.4 1.0
CA B:LEU202 4.4 21.5 1.0
N B:ALA204 4.4 21.2 1.0
CA B:PRO203 4.5 20.9 1.0
N A:LEU198 4.5 22.9 1.0
CA B:ALA204 4.6 22.2 1.0
CB A:CYS200 4.6 22.9 1.0
N B:LEU206 4.6 28.2 1.0
N A:ASP197 4.6 23.6 1.0
N A:GLN199 4.6 24.0 1.0
CA A:GLN199 4.6 25.1 1.0
N B:GLY205 4.8 23.9 1.0
CB B:LEU206 4.8 29.2 1.0
C B:LEU206 4.8 30.4 1.0
CA A:LEU198 4.8 22.7 1.0
C A:ASP197 4.8 23.4 1.0
C B:ALA204 4.9 23.1 1.0
C A:GLN199 4.9 24.8 1.0
CA B:LEU206 5.0 29.7 1.0

Reference:

H.Li, G.Jogl. Tigar (TP53 Induced Glycolysis and Apoptosis Regulator) Is A Fructose-2,6- and Fructose-1,6-Bisphosphatase To Be Published.
Page generated: Mon Aug 12 08:04:46 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy