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Potassium in PDB 3b9r: Serca CA2+-Atpase E2 Aluminium Fluoride Complex Without Thapsigargin

Enzymatic activity of Serca CA2+-Atpase E2 Aluminium Fluoride Complex Without Thapsigargin

All present enzymatic activity of Serca CA2+-Atpase E2 Aluminium Fluoride Complex Without Thapsigargin:
3.6.3.8;

Protein crystallography data

The structure of Serca CA2+-Atpase E2 Aluminium Fluoride Complex Without Thapsigargin, PDB code: 3b9r was solved by C.Olesen, M.Picard, A.M.L.Winther, J.P.Morth, J.V.Moller, P.Nissen, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.99 / 3.00
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 131.980, 94.430, 136.180, 90.00, 107.79, 90.00
R / Rfree (%) 18.5 / 23.5

Other elements in 3b9r:

The structure of Serca CA2+-Atpase E2 Aluminium Fluoride Complex Without Thapsigargin also contains other interesting chemical elements:

Fluorine (F) 8 atoms
Magnesium (Mg) 2 atoms
Aluminium (Al) 2 atoms

Potassium Binding Sites:

The binding sites of Potassium atom in the Serca CA2+-Atpase E2 Aluminium Fluoride Complex Without Thapsigargin (pdb code 3b9r). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total 2 binding sites of Potassium where determined in the Serca CA2+-Atpase E2 Aluminium Fluoride Complex Without Thapsigargin, PDB code: 3b9r:
Jump to Potassium binding site number: 1; 2;

Potassium binding site 1 out of 2 in 3b9r

Go back to Potassium Binding Sites List in 3b9r
Potassium binding site 1 out of 2 in the Serca CA2+-Atpase E2 Aluminium Fluoride Complex Without Thapsigargin


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of Serca CA2+-Atpase E2 Aluminium Fluoride Complex Without Thapsigargin within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K997

b:78.5
occ:1.00
O A:LEU711 3.0 82.6 1.0
O A:ALA714 3.0 77.6 1.0
OE1 A:GLU732 3.1 65.9 1.0
O A:LYS712 3.2 77.3 1.0
OE2 A:GLU732 3.2 63.6 1.0
CD A:GLU732 3.5 61.9 1.0
C A:LYS712 3.7 58.7 1.0
CA A:LYS712 3.7 51.3 1.0
C A:LEU711 3.9 66.1 1.0
O A:GLU715 4.0 79.0 1.0
N A:GLY717 4.0 60.4 1.0
C A:ALA714 4.2 75.2 1.0
N A:LYS712 4.3 55.0 1.0
O A:ALA730 4.3 76.1 1.0
C A:GLU715 4.3 70.6 1.0
C A:ILE716 4.6 63.9 1.0
CA A:GLY717 4.7 49.5 1.0
O A:HOH1002 4.7 64.4 1.0
N A:ILE716 4.7 66.7 1.0
N A:ALA714 4.7 62.2 1.0
CA A:ILE716 4.8 56.8 1.0
N A:LYS713 4.8 49.4 1.0
CB A:LYS712 4.9 50.4 1.0
CG A:GLU732 4.9 65.7 1.0
C A:LYS713 4.9 65.0 1.0
CA A:ALA714 4.9 51.8 1.0

Potassium binding site 2 out of 2 in 3b9r

Go back to Potassium Binding Sites List in 3b9r
Potassium binding site 2 out of 2 in the Serca CA2+-Atpase E2 Aluminium Fluoride Complex Without Thapsigargin


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 2 of Serca CA2+-Atpase E2 Aluminium Fluoride Complex Without Thapsigargin within 5.0Å range:
probe atom residue distance (Å) B Occ
B:K997

b:99.0
occ:1.00
OE1 B:GLU732 3.2 96.5 1.0
O B:LYS712 3.3 0.1 1.0
O B:LEU711 3.3 0.6 1.0
O B:ALA714 3.4 0.0 1.0
OE2 B:GLU732 3.5 96.5 1.0
NE2 B:GLN244 3.5 0.3 1.0
CD B:GLU732 3.6 98.2 1.0
CA B:LYS712 3.8 88.6 1.0
C B:LYS712 3.8 0.2 1.0
OE1 B:GLN244 3.9 0.8 1.0
N B:GLY717 3.9 94.3 1.0
O B:HOH1002 4.0 84.8 1.0
O B:GLU715 4.0 91.8 1.0
C B:ALA714 4.0 0.8 1.0
C B:GLU715 4.0 81.7 1.0
CD B:GLN244 4.1 0.0 1.0
N B:ILE716 4.2 99.1 1.0
CA B:ILE716 4.2 0.2 1.0
C B:LEU711 4.3 98.4 1.0
O B:ALA730 4.4 74.5 1.0
C B:ILE716 4.4 0.3 1.0
N B:LYS712 4.5 95.8 1.0
N B:GLU715 4.6 95.1 1.0
N B:ALA714 4.6 95.9 1.0
CA B:GLU715 4.7 88.7 1.0
CA B:ALA714 4.8 0.8 1.0
CA B:GLY717 4.8 91.4 1.0
CG B:GLU732 4.9 97.8 1.0
CB B:LYS712 4.9 88.0 1.0
N B:LYS713 4.9 0.6 1.0

Reference:

C.Olesen, M.Picard, A.M.L.Winther, C.Gyrup, J.P.Morth, C.Oxvig, J.V.Moller, P.Nissen. The Structural Basis of Calcium Transport By the Calcium Pump Nature V. 450 1036 2007.
ISSN: ISSN 0028-0836
PubMed: 18075584
DOI: 10.1038/NATURE06418
Page generated: Mon Aug 12 07:49:54 2024

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