Atomistry » Potassium » PDB 3ay9-3ccl » 3b0l
Atomistry »
  Potassium »
    PDB 3ay9-3ccl »
      3b0l »

Potassium in PDB 3b0l: M175G Mutant of Assimilatory Nitrite Reductase (NII3) From Tobbaco Leaf

Enzymatic activity of M175G Mutant of Assimilatory Nitrite Reductase (NII3) From Tobbaco Leaf

All present enzymatic activity of M175G Mutant of Assimilatory Nitrite Reductase (NII3) From Tobbaco Leaf:
1.7.7.1;

Protein crystallography data

The structure of M175G Mutant of Assimilatory Nitrite Reductase (NII3) From Tobbaco Leaf, PDB code: 3b0l was solved by S.Nakano, M.Takahashi, A.Sakamoto, H.Morikawa, K.Katayanagi, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.99 / 1.70
Space group P 4 21 2
Cell size a, b, c (Å), α, β, γ (°) 133.271, 133.271, 77.734, 90.00, 90.00, 90.00
R / Rfree (%) 17.7 / 20.4

Other elements in 3b0l:

The structure of M175G Mutant of Assimilatory Nitrite Reductase (NII3) From Tobbaco Leaf also contains other interesting chemical elements:

Iron (Fe) 5 atoms
Chlorine (Cl) 2 atoms

Potassium Binding Sites:

The binding sites of Potassium atom in the M175G Mutant of Assimilatory Nitrite Reductase (NII3) From Tobbaco Leaf (pdb code 3b0l). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total only one binding site of Potassium was determined in the M175G Mutant of Assimilatory Nitrite Reductase (NII3) From Tobbaco Leaf, PDB code: 3b0l:

Potassium binding site 1 out of 1 in 3b0l

Go back to Potassium Binding Sites List in 3b0l
Potassium binding site 1 out of 1 in the M175G Mutant of Assimilatory Nitrite Reductase (NII3) From Tobbaco Leaf


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of M175G Mutant of Assimilatory Nitrite Reductase (NII3) From Tobbaco Leaf within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K603

b:10.6
occ:1.00
 OD1 A:ASN403 2.6 9.8 1.0
O A:HOH1013 2.7 11.1 1.0
O A:ILE371 2.7 9.1 1.0
O A:HOH1027 2.8 11.2 1.0
O A:GLU401 2.8 8.7 1.0
O A:GLN402 2.9 9.3 1.0
O A:HOH1042 3.1 9.4 1.0
CG A:ASN403 3.4 8.9 1.0
C A:GLN402 3.4 9.5 1.0
C A:ILE371 3.7 9.2 1.0
ND2 A:ASN403 3.8 9.8 1.0
O A:LEU437 3.8 11.8 1.0
CB A:GLN402 3.9 8.6 1.0
C A:GLU401 4.0 8.9 1.0
N A:GLY374 4.0 8.7 1.0
N A:VAL373 4.0 9.1 1.0
N A:ASN403 4.1 8.7 1.0
ND1 A:HIS370 4.1 13.4 1.0
CA A:GLN402 4.1 8.5 1.0
CE1 A:HIS370 4.2 7.3 1.0
N A:ILE371 4.2 8.5 1.0
CA A:ASN403 4.4 9.0 1.0
CA A:VAL373 4.4 9.6 1.0
CA A:ILE371 4.5 9.2 1.0
CB A:ASN403 4.5 9.0 1.0
N A:GLN402 4.5 8.5 1.0
C A:VAL373 4.6 8.6 1.0
C A:PRO372 4.6 9.2 1.0
CA A:GLY374 4.6 9.5 1.0
N A:PRO372 4.7 9.3 1.0
CB A:ILE371 4.7 9.2 1.0
CA A:PRO372 4.7 9.4 1.0
OE1 A:GLN402 4.8 11.8 1.0

Reference:

S.Nakano, M.Takahashi, A.Sakamoto, H.Morikawa, K.Katayanagi. Structure-Function Relationship of Assimilatory Nitrite Reductases From the Leaf and Root of Tobacco Based on High Resolution Structures Protein Sci. V. 21 383 2012.
ISSN: ISSN 0961-8368
PubMed: 22238192
DOI: 10.1002/PRO.2025
Page generated: Sun Dec 13 23:14:28 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy