Atomistry » Potassium » PDB 2w0f-2xo0 » 2xes
Atomistry »
  Potassium »
    PDB 2w0f-2xo0 »
      2xes »

Potassium in PDB 2xes: Human PATL1 C-Terminal Domain (Loop Variant)

Protein crystallography data

The structure of Human PATL1 C-Terminal Domain (Loop Variant), PDB code: 2xes was solved by F.Tritschler, O.Weichenrieder, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 67.020 / 2.10
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 56.650, 70.760, 134.040, 90.00, 90.00, 90.00
R / Rfree (%) 19.86 / 23.23

Potassium Binding Sites:

The binding sites of Potassium atom in the Human PATL1 C-Terminal Domain (Loop Variant) (pdb code 2xes). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total 2 binding sites of Potassium where determined in the Human PATL1 C-Terminal Domain (Loop Variant), PDB code: 2xes:
Jump to Potassium binding site number: 1; 2;

Potassium binding site 1 out of 2 in 2xes

Go back to Potassium Binding Sites List in 2xes
Potassium binding site 1 out of 2 in the Human PATL1 C-Terminal Domain (Loop Variant)


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of Human PATL1 C-Terminal Domain (Loop Variant) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K1771

b:54.7
occ:1.00
O A:HOH2069 3.7 40.7 1.0
NE2 A:GLN586 3.8 44.3 1.0
OG1 A:THR522 3.9 34.6 1.0
CD2 A:HIS583 4.0 37.7 1.0
O A:HIS583 4.0 25.3 1.0
CG A:HIS583 4.0 36.9 1.0
CB A:HIS583 4.0 30.9 1.0
CG1 A:ILE587 4.0 25.4 1.0
CA A:HIS583 4.1 29.0 1.0
CG1 A:ILE525 4.1 35.3 1.0
CA A:THR522 4.1 38.6 1.0
CG2 A:THR522 4.1 30.6 1.0
CB A:ILE525 4.1 32.8 1.0
CD1 A:ILE587 4.3 25.0 1.0
CG2 A:ILE525 4.3 31.8 1.0
CB A:THR522 4.3 35.1 1.0
C A:HIS583 4.5 28.1 1.0
CB A:GLN586 4.5 29.4 1.0
CD A:GLN586 4.7 39.6 1.0
NE2 A:HIS583 4.7 39.0 1.0
ND1 A:HIS583 4.8 40.7 1.0
O A:THR522 4.9 32.8 1.0
N A:THR522 4.9 39.0 1.0

Potassium binding site 2 out of 2 in 2xes

Go back to Potassium Binding Sites List in 2xes
Potassium binding site 2 out of 2 in the Human PATL1 C-Terminal Domain (Loop Variant)


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 2 of Human PATL1 C-Terminal Domain (Loop Variant) within 5.0Å range:
probe atom residue distance (Å) B Occ
B:K1767

b:45.0
occ:1.00
O B:HOH2108 3.5 39.9 1.0
O B:HOH2264 3.6 41.8 1.0
CB B:ALA610 3.9 24.9 1.0
CB B:SER651 4.0 23.9 1.0
O B:ALA610 4.1 25.4 1.0
CG B:LEU655 4.2 24.0 1.0
CE B:MSE614 4.2 23.6 1.0
OG B:SER651 4.2 27.5 1.0
CD1 B:LEU655 4.2 23.8 1.0
O B:SER651 4.4 21.4 1.0
CD2 B:LEU655 4.4 22.5 1.0
CA B:SER651 4.6 26.5 1.0
CB B:MSE614 4.6 21.5 1.0
C B:ALA610 4.6 24.4 1.0
CA B:ALA610 4.6 25.3 1.0
CD1 B:LEU647 4.6 25.5 1.0
C B:SER651 4.8 22.9 1.0
O B:HOH2233 4.9 44.3 1.0

Reference:

J.E.Braun, F.Tritschler, G.Haas, C.Igreja, V.Truffault, O.Weichenrieder, E.Izaurralde. The C-Terminal Alpha-Alpha Superhelix of Pat Is Required For Mrna Decapping in Metazoa. Embo J. V. 29 2368 2010.
ISSN: ISSN 0261-4189
PubMed: 20543818
DOI: 10.1038/EMBOJ.2010.124
Page generated: Mon Aug 12 07:37:54 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy