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Potassium in PDB 2xes: Human PATL1 C-Terminal Domain (Loop Variant)

Protein crystallography data

The structure of Human PATL1 C-Terminal Domain (Loop Variant), PDB code: 2xes was solved by F.Tritschler, O.Weichenrieder, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 67.020 / 2.10
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 56.650, 70.760, 134.040, 90.00, 90.00, 90.00
R / Rfree (%) 19.86 / 23.23

Potassium Binding Sites:

The binding sites of Potassium atom in the Human PATL1 C-Terminal Domain (Loop Variant) (pdb code 2xes). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total 2 binding sites of Potassium where determined in the Human PATL1 C-Terminal Domain (Loop Variant), PDB code: 2xes:
Jump to Potassium binding site number: 1; 2;

Potassium binding site 1 out of 2 in 2xes

Go back to Potassium Binding Sites List in 2xes
Potassium binding site 1 out of 2 in the Human PATL1 C-Terminal Domain (Loop Variant)


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of Human PATL1 C-Terminal Domain (Loop Variant) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K1771

b:54.7
occ:1.00
O A:HOH2069 3.7 40.7 1.0
NE2 A:GLN586 3.8 44.3 1.0
OG1 A:THR522 3.9 34.6 1.0
CD2 A:HIS583 4.0 37.7 1.0
O A:HIS583 4.0 25.3 1.0
CG A:HIS583 4.0 36.9 1.0
CB A:HIS583 4.0 30.9 1.0
CG1 A:ILE587 4.0 25.4 1.0
CA A:HIS583 4.1 29.0 1.0
CG1 A:ILE525 4.1 35.3 1.0
CA A:THR522 4.1 38.6 1.0
CG2 A:THR522 4.1 30.6 1.0
CB A:ILE525 4.1 32.8 1.0
CD1 A:ILE587 4.3 25.0 1.0
CG2 A:ILE525 4.3 31.8 1.0
CB A:THR522 4.3 35.1 1.0
C A:HIS583 4.5 28.1 1.0
CB A:GLN586 4.5 29.4 1.0
CD A:GLN586 4.7 39.6 1.0
NE2 A:HIS583 4.7 39.0 1.0
ND1 A:HIS583 4.8 40.7 1.0
O A:THR522 4.9 32.8 1.0
N A:THR522 4.9 39.0 1.0

Potassium binding site 2 out of 2 in 2xes

Go back to Potassium Binding Sites List in 2xes
Potassium binding site 2 out of 2 in the Human PATL1 C-Terminal Domain (Loop Variant)


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 2 of Human PATL1 C-Terminal Domain (Loop Variant) within 5.0Å range:
probe atom residue distance (Å) B Occ
B:K1767

b:45.0
occ:1.00
O B:HOH2108 3.5 39.9 1.0
O B:HOH2264 3.6 41.8 1.0
CB B:ALA610 3.9 24.9 1.0
CB B:SER651 4.0 23.9 1.0
O B:ALA610 4.1 25.4 1.0
CG B:LEU655 4.2 24.0 1.0
CE B:MSE614 4.2 23.6 1.0
OG B:SER651 4.2 27.5 1.0
CD1 B:LEU655 4.2 23.8 1.0
O B:SER651 4.4 21.4 1.0
CD2 B:LEU655 4.4 22.5 1.0
CA B:SER651 4.6 26.5 1.0
CB B:MSE614 4.6 21.5 1.0
C B:ALA610 4.6 24.4 1.0
CA B:ALA610 4.6 25.3 1.0
CD1 B:LEU647 4.6 25.5 1.0
C B:SER651 4.8 22.9 1.0
O B:HOH2233 4.9 44.3 1.0

Reference:

J.E.Braun, F.Tritschler, G.Haas, C.Igreja, V.Truffault, O.Weichenrieder, E.Izaurralde. The C-Terminal Alpha-Alpha Superhelix of Pat Is Required For Mrna Decapping in Metazoa. Embo J. V. 29 2368 2010.
ISSN: ISSN 0261-4189
PubMed: 20543818
DOI: 10.1038/EMBOJ.2010.124
Page generated: Sun Dec 13 23:13:34 2020

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