Potassium in the structure of Structure of The Thermus Thermophilus 30S Ribosomal Subunit Complexed With A Valine-Asl With CMO5U In Position 34 Bound to An Mrna With A Gua-Codon in the A-Site and Paromomycin. (pdb 2uuc)

The binding sites of Potassium atom in the structure of Structure of The Thermus Thermophilus 30S Ribosomal Subunit Complexed With A Valine-Asl With CMO5U In Position 34 Bound to An Mrna With A Gua-Codon in the A-Site and Paromomycin. (pdb code 2uuc). This binding sites where shown with 5.0 Angstroms radius around Potassium atom. The 2uuc structure was solved by A.WEIXLBAUMER, F.V.MURPHY, A.DZIERGOWSKA, A.MALKIEWICZ, F.A.P.VENDEIX, P.F.AGRIS, V.RAMAKRISHNAN, with X-Ray Crystallography technique, brief refinement statistics is given in the table below: Resolution (A) 29.9-3.1 Space group P41212 a (A) 400.965 b (A) 400.965 c (A) 174.368 alpha (°) 90.00 beta (°) 90.00 gamma (°) 90.00 Rfactor (%) 21 Rfree (%) 24.5 Potassium Binding Sites: Potassium binding site 1 out of 56 in 2uuc Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 1 of Potassium in the PDB 2uuc. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Potassium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: G292, A: G293, A: U294, A: A303, A: U304, A: G305, Z: K1192, Z: K1232, conact list: Atom Atom Distance (A) K OP2 A:G292 4.73 K C6 A:G293 4.19 K C5 A:G293 4.76 K N7 A:G293 4.55 K O6 A:G293 3.13 K O4 A:U294 4.72 K C6 A:A303 4.78 K N6 A:A303 3.63 K N3 A:U304 3.89 K C4 A:U304 3.75 K O4 A:U304 2.81 K C6 A:G305 3.79 K N1 A:G305 4.28 K C5 A:G305 4.90 K O6 A:G305 2.85 K K Z:K1192 4.47 K K Z:K1232 3.71 interactive model: Potassium binding site 2 out of 56 in 2uuc Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 2 of Potassium in the PDB 2uuc. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Potassium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: C132, A: U133, A: A228, A: U229, A: G230, conact list: Atom Atom Distance (A) K N4 A:C132 4.16 K N3 A:U133 3.85 K C4 A:U133 3.87 K O4 A:U133 3.20 K N6 A:A228 5.00 K N7 A:A228 4.93 K N3 A:U229 4.92 K C5 A:U229 4.14 K C4 A:U229 3.73 K O4 A:U229 2.73 K C6 A:G230 4.09 K C5 A:G230 4.69 K N7 A:G230 4.62 K O6 A:G230 3.14 interactive model: Potassium binding site 3 out of 56 in 2uuc Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 3 of Potassium in the PDB 2uuc. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Potassium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: U863, A: C866, A: G867, A: U1078, conact list: Atom Atom Distance (A) K N3 A:U863 4.14 K C4 A:U863 4.00 K O4 A:U863 3.14 K OP2 A:C866 3.94 K O6 A:G867 4.46 K OP1 A:U1078 4.97 interactive model: Potassium binding site 4 out of 56 in 2uuc Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 4 of Potassium in the PDB 2uuc. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Potassium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: G577, A: U813, A: A816, conact list: Atom Atom Distance (A) K OP1 A:G577 3.18 K C8 A:G577 4.00 K C5 A:G577 4.60 K P A:G577 4.64 K N7 A:G577 3.38 K O6 A:G577 4.89 K OP1 A:U813 3.42 K P A:U813 4.53 K OP2 A:U813 4.80 K N6 A:A816 4.64 interactive model: Potassium binding site 5 out of 56 in 2uuc Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 5 of Potassium in the PDB 2uuc. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Potassium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: G894, A: G895, A: C896, A: G903, A: C904, conact list: Atom Atom Distance (A) K C8 A:G894 4.82 K C6 A:G894 4.36 K C5 A:G894 4.37 K N7 A:G894 3.84 K O6 A:G894 3.82 K C6 A:G895 4.26 K C5 A:G895 4.57 K N7 A:G895 4.11 K O6 A:G895 3.34 K N4 A:C896 4.44 K O6 A:G903 4.91 K N4 A:C904 4.69 interactive model: Potassium binding site 6 out of 56 in 2uuc Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 6 of Potassium in the PDB 2uuc. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Potassium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: C290, A: C291, A: U304, A: G305, Z: K1187, Z: K1232, conact list: Atom Atom Distance (A) K O3' A:C290 4.79 K OP1 A:C291 3.09 K P A:C291 3.80 K OP2 A:C291 3.56 K N3 A:U304 4.29 K C6 A:U304 4.99 K C5 A:U304 4.06 K C4 A:U304 3.59 K O4 A:U304 3.18 K C8 A:G305 4.67 K C6 A:G305 3.63 K N1 A:G305 4.88 K C5 A:G305 3.88 K N7 A:G305 3.50 K O6 A:G305 2.88 K K Z:K1187 4.47 K K Z:K1232 4.06 interactive model: Potassium binding site 7 out of 56 in 2uuc Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 7 of Potassium in the PDB 2uuc. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Potassium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: G575, A: G576, A: G577, A: A815, conact list: Atom Atom Distance (A) K OP1 A:G575 4.38 K O3' A:G575 4.64 K OP2 A:G575 4.75 K OP1 A:G576 3.02 K P A:G576 4.43 K C5' A:G576 4.72 K P A:G577 4.62 K OP2 A:G577 3.19 K C5' A:G577 4.63 K OP1 A:A815 4.59 K OP2 A:A815 4.69 interactive model: Potassium binding site 8 out of 56 in 2uuc Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 8 of Potassium in the PDB 2uuc. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Potassium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: U296, A: G297, conact list: Atom Atom Distance (A) K C5 A:U296 4.54 K C4 A:U296 4.08 K O4 A:U296 3.11 K C6 A:G297 3.95 K N1 A:G297 4.92 K C5 A:G297 4.77 K N7 A:G297 4.85 K O6 A:G297 2.80 interactive model: Potassium binding site 9 out of 56 in 2uuc Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 9 of Potassium in the PDB 2uuc. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Potassium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: G898, A: A900, conact list: Atom Atom Distance (A) K C8 A:G898 4.66 K C6 A:G898 3.66 K N1 A:G898 4.72 K C5 A:G898 3.85 K N7 A:G898 3.67 K C4 A:G898 4.94 K O6 A:G898 3.19 K OP1 A:A900 3.84 K P A:A900 4.40 K OP2 A:A900 3.94 interactive model: Potassium binding site 10 out of 56 in 2uuc Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 10 of Potassium in the PDB 2uuc. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Potassium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: U256, A: G257, A: G258, A: G266, A: C268, A: C269, Z: Mg1003, conact list: Atom Atom Distance (A) K C5 A:U256 4.90 K C4 A:U256 4.84 K O4 A:U256 4.39 K C6 A:G257 3.75 K N1 A:G257 4.97 K C5 A:G257 4.15 K N7 A:G257 3.87 K O6 A:G257 2.86 K C6 A:G258 4.14 K C5 A:G258 4.47 K N7 A:G258 4.13 K O6 A:G258 3.32 K OP1 A:G266 3.99 K P A:G266 4.30 K OP2 A:G266 3.57 K N4 A:C268 4.64 K N4 A:C269 4.72 K MG Z:Mg1003 3.57 interactive model: Potassium binding site 11 out of 56 in 2uuc Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 11 of Potassium in the PDB 2uuc. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Potassium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: G1087, A: G1088, A: G1089, A: U1090, conact list: Atom Atom Distance (A) K OP2 A:G1087 4.77 K C8 A:G1088 4.75 K C6 A:G1088 4.82 K C5 A:G1088 4.62 K N7 A:G1088 3.96 K OP2 A:G1088 4.55 K O6 A:G1088 4.45 K C6 A:G1089 4.93 K C5 A:G1089 4.85 K N7 A:G1089 4.02 K O6 A:G1089 4.25 K C5 A:U1090 4.93 K C4 A:U1090 4.33 K O4 A:U1090 3.38 interactive model: Potassium binding site 12 out of 56 in 2uuc Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 12 of Potassium in the PDB 2uuc. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Potassium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: G837, A: G838, A: C840, conact list: Atom Atom Distance (A) K C6 A:G837 4.16 K C5 A:G837 4.54 K N7 A:G837 4.33 K O6 A:G837 3.41 K C6 A:G838 3.87 K N1 A:G838 4.96 K C5 A:G838 4.58 K N7 A:G838 4.53 K O6 A:G838 2.75 K N3 A:C840 4.87 K C2 A:C840 4.76 K O2 A:C840 4.20 interactive model: Potassium binding site 13 out of 56 in 2uuc Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 13 of Potassium in the PDB 2uuc. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Potassium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: U14, A: U17, conact list: Atom Atom Distance (A) K N3 A:U14 4.75 K C4 A:U14 4.28 K O4 A:U14 3.24 K OP1 A:U17 4.18 K P A:U17 4.48 K OP2 A:U17 3.70 interactive model: Potassium binding site 14 out of 56 in 2uuc Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 14 of Potassium in the PDB 2uuc. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Potassium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: A535, A: C536, A: G537, A: G538, A: A539, Z: K1204, conact list: Atom Atom Distance (A) K OP1 A:A535 3.52 K P A:A535 4.82 K C5' A:A535 4.67 K C5 A:C536 4.53 K P A:C536 4.68 K C4 A:C536 4.91 K OP2 A:C536 3.29 K O5' A:C536 5.00 K C8 A:G537 4.93 K C6 A:G537 4.39 K C5 A:G537 4.44 K N7 A:G537 3.96 K O6 A:G537 3.85 K C6 A:G538 4.86 K N7 A:G538 4.80 K O6 A:G538 3.84 K N6 A:A539 4.97 K K Z:K1204 2.99 interactive model: Potassium binding site 15 out of 56 in 2uuc Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 15 of Potassium in the PDB 2uuc. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Potassium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: G664, A: U740, Z: K1227, conact list: Atom Atom Distance (A) K C6 A:G664 4.66 K O6 A:G664 3.49 K O4 A:U740 4.43 K K Z:K1227 3.94 interactive model: Potassium binding site 16 out of 56 in 2uuc Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 16 of Potassium in the PDB 2uuc. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Potassium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: G406, A: G407, A: A408, A: C435, A: C436, A: A495, conact list: Atom Atom Distance (A) K N9 A:G406 4.91 K C8 A:G406 4.12 K C6 A:G406 3.13 K N1 A:G406 4.33 K C5 A:G406 3.27 K N7 A:G406 3.00 K C4 A:G406 4.49 K O6 A:G406 2.65 K C6 A:G407 4.04 K C5 A:G407 4.49 K N7 A:G407 4.20 K O6 A:G407 3.06 K N6 A:A408 4.88 K N4 A:C435 4.62 K N4 A:C436 4.89 K C2' A:A495 4.01 K O2' A:A495 3.34 interactive model: Potassium binding site 17 out of 56 in 2uuc Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 17 of Potassium in the PDB 2uuc. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Potassium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: G592, A: G593, A: G594, A: G595, A: U641, Z: Mg1010, conact list: Atom Atom Distance (A) K N7 A:G592 4.86 K C8 A:G593 4.39 K C6 A:G593 4.94 K C5 A:G593 4.58 K N7 A:G593 3.63 K OP2 A:G593 4.84 K O6 A:G593 4.56 K C6 A:G594 4.52 K C5 A:G594 4.71 K N7 A:G594 4.18 K O6 A:G594 3.72 K C6 A:G595 4.50 K N1 A:G595 4.56 K O6 A:G595 4.00 K O2' A:U641 4.60 K MG Z:Mg1010 3.49 interactive model: Potassium binding site 18 out of 56 in 2uuc Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 18 of Potassium in the PDB 2uuc. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Potassium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: U512, A: C513, A: U534, A: A535, A: G537, A: G538, A: A539, Z: K1200, conact list: Atom Atom Distance (A) K C5 A:U512 4.43 K C4 A:U512 4.03 K O4 A:U512 3.11 K N4 A:C513 3.77 K C3' A:U534 4.12 K O3' A:U534 3.05 K C2' A:U534 4.29 K C4' A:U534 4.47 K O2' A:U534 3.33 K OP1 A:A535 3.26 K P A:A535 3.84 K C5' A:A535 4.40 K O5' A:A535 4.60 K O6 A:G537 4.82 K O6 A:G538 4.08 K N6 A:A539 4.53 K K Z:K1200 2.99 interactive model: Potassium binding site 19 out of 56 in 2uuc Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 19 of Potassium in the PDB 2uuc. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Potassium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: A918, A: A919, A: A1394, Z: Mg1113, conact list: Atom Atom Distance (A) K OP1 A:A918 4.89 K P A:A918 4.65 K OP2 A:A918 3.85 K O5' A:A918 4.77 K OP2 A:A919 4.57 K OP2 A:A1394 4.63 K MG Z:Mg1113 3.14 interactive model: Potassium binding site 20 out of 56 in 2uuc Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 20 of Potassium in the PDB 2uuc. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Potassium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: A185, A: U190, A: G191, A: U192, conact list: Atom Atom Distance (A) K N6 A:A185 4.97 K C6 A:U190 4.55 K C5 A:U190 3.85 K C4 A:U190 4.27 K OP2 A:U190 4.96 K O4 A:U190 4.25 K C8 A:G191 4.26 K C6 A:G191 4.04 K C5 A:G191 3.95 K N7 A:G191 3.21 K OP2 A:G191 4.51 K O6 A:G191 3.48 K C5 A:U192 4.42 K C4 A:U192 4.21 K O4 A:U192 3.39 interactive model: Potassium binding site 21 out of 56 in 2uuc Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 21 of Potassium in the PDB 2uuc. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Potassium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: C458, A: G460, A: G471, A: A472, A: G473, A: G474, Z: Mg1016, conact list: Atom Atom Distance (A) K N4 A:C458 4.73 K N2 A:G460 4.86 K OP2 A:G471 4.14 K OP2 A:A472 3.97 K C8 A:G473 4.42 K C6 A:G473 3.37 K N1 A:G473 4.59 K C5 A:G473 3.58 K N7 A:G473 3.28 K C4 A:G473 4.84 K O6 A:G473 2.73 K C6 A:G474 4.02 K C5 A:G474 4.35 K N7 A:G474 4.00 K O6 A:G474 3.17 K MG Z:Mg1016 3.65 interactive model: Potassium binding site 22 out of 56 in 2uuc Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 22 of Potassium in the PDB 2uuc. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Potassium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: G557, A: G558, conact list: Atom Atom Distance (A) K C8 A:G557 4.50 K C6 A:G557 4.67 K C5 A:G557 4.44 K N7 A:G557 3.62 K OP2 A:G557 4.97 K O6 A:G557 4.22 K C6 A:G558 3.93 K N1 A:G558 4.95 K C5 A:G558 4.70 K N7 A:G558 4.72 K O6 A:G558 2.79 interactive model: Potassium binding site 23 out of 56 in 2uuc Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 23 of Potassium in the PDB 2uuc. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Potassium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: G1184, A: G1185, A: G1186, conact list: Atom Atom Distance (A) K C6 A:G1184 4.78 K C5 A:G1184 4.96 K N7 A:G1184 4.93 K O6 A:G1184 4.49 K C8 A:G1185 4.92 K C6 A:G1185 3.58 K N1 A:G1185 4.79 K C5 A:G1185 3.97 K N7 A:G1185 3.71 K O6 A:G1185 2.73 K C6 A:G1186 4.45 K C5 A:G1186 4.77 K N7 A:G1186 4.37 K O6 A:G1186 3.58 interactive model: Potassium binding site 24 out of 56 in 2uuc Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 24 of Potassium in the PDB 2uuc. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Potassium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: G688, A: C699, A: G700, conact list: Atom Atom Distance (A) K C6 A:G688 3.85 K C5 A:G688 4.20 K N7 A:G688 3.84 K O6 A:G688 2.94 K N4 A:C699 4.36 K C2 A:G700 4.96 K C6 A:G700 3.80 K N1 A:G700 3.82 K O6 A:G700 3.20 interactive model: Potassium binding site 25 out of 56 in 2uuc Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 25 of Potassium in the PDB 2uuc. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Potassium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: G247, A: C248, A: C277, A: G278, Q: Glu96, conact list: Atom Atom Distance (A) K C6 A:G247 3.65 K N1 A:G247 4.92 K C5 A:G247 4.08 K N7 A:G247 3.78 K O6 A:G247 2.68 K N4 A:C248 4.67 K N4 A:C277 4.89 K C6 A:G278 4.67 K N1 A:G278 4.44 K O6 A:G278 4.18 K OE1 Q:Glu96 2.60 K CB Q:Glu96 4.91 K OE2 Q:Glu96 3.11 K CD Q:Glu96 2.71 K CG Q:Glu96 3.43 interactive model: Potassium binding site 26 out of 56 in 2uuc Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 26 of Potassium in the PDB 2uuc. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Potassium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: G947, A: A1332, A: A1333, M: Thr109, conact list: Atom Atom Distance (A) K OP1 A:G947 4.85 K C5' A:G947 4.38 K N3 A:A1332 4.08 K C3' A:A1332 4.70 K C2 A:A1332 4.80 K C1' A:A1332 4.62 K O3' A:A1332 4.66 K C2' A:A1332 3.55 K O2' A:A1332 2.99 K N9 A:A1333 4.63 K C3' A:A1333 4.74 K C8 A:A1333 4.97 K C1' A:A1333 3.74 K O4' A:A1333 2.72 K C5' A:A1333 3.72 K C2' A:A1333 4.76 K C4' A:A1333 3.36 K O5' A:A1333 4.53 K O2' A:A1333 4.88 K CB M:Thr109 4.66 K CG2 M:Thr109 4.84 K OG1 M:Thr109 3.95 K CA M:Thr109 4.45 interactive model: Potassium binding site 27 out of 56 in 2uuc Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 27 of Potassium in the PDB 2uuc. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Potassium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: G128, A: U129, A: C131, A: G231, A: G232, A: C233, conact list: Atom Atom Distance (A) K O6 A:G128 4.06 K N3 A:U129 4.09 K C4 A:U129 3.80 K O4 A:U129 2.76 K N4 A:C131 4.36 K C6 A:G231 3.82 K N1 A:G231 4.77 K C5 A:G231 4.32 K N7 A:G231 4.33 K O6 A:G231 3.14 K C6 A:G232 4.00 K C5 A:G232 4.54 K N7 A:G232 4.30 K O6 A:G232 2.93 K N4 A:C233 4.30 interactive model: Potassium binding site 28 out of 56 in 2uuc Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 28 of Potassium in the PDB 2uuc. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Potassium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: C153, A: C154, A: G168, A: C169, conact list: Atom Atom Distance (A) K O2 A:C153 4.38 K C1' A:C154 4.75 K O4' A:C154 4.74 K N3 A:G168 4.83 K N2 A:G168 3.53 K C2 A:G168 4.64 K C2 A:C169 4.63 K N1 A:C169 4.71 K C1' A:C169 4.18 K O2 A:C169 4.06 K O4' A:C169 4.52 K O2' A:C169 4.97 interactive model: Potassium binding site 29 out of 56 in 2uuc Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 29 of Potassium in the PDB 2uuc. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Potassium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: A1236, A: U1351, A: C1352, U: Lys3, conact list: Atom Atom Distance (A) K OP1 A:A1236 4.63 K P A:A1236 4.83 K OP2 A:A1236 3.96 K O3' A:U1351 4.31 K OP1 A:C1352 2.73 K P A:C1352 3.98 K OP2 A:C1352 4.69 K CE U:Lys3 3.97 K NZ U:Lys3 3.66 interactive model: Potassium binding site 30 out of 56 in 2uuc Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 30 of Potassium in the PDB 2uuc. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Potassium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: G299, A: A300, A: U565, conact list: Atom Atom Distance (A) K N9 A:G299 4.88 K N3 A:G299 3.83 K N2 A:G299 4.44 K C2 A:G299 4.61 K C1' A:G299 4.19 K C4 A:G299 4.74 K C2' A:G299 3.76 K O2' A:G299 2.92 K N9 A:A300 4.28 K C8 A:A300 4.95 K C1' A:A300 3.56 K O4' A:A300 3.00 K C4 A:A300 4.98 K C5' A:A300 4.73 K C2' A:A300 4.82 K C4' A:A300 4.15 K O2' A:A300 4.89 K C2 A:U565 4.12 K N1 A:U565 4.80 K C1' A:U565 4.38 K O2 A:U565 2.95 K C2' A:U565 4.81 K O2' A:U565 4.27 interactive model: Potassium binding site 31 out of 56 in 2uuc Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 31 of Potassium in the PDB 2uuc. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Potassium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: G490, A: G491, A: G492, conact list: Atom Atom Distance (A) K C6 A:G490 4.21 K C5 A:G490 4.53 K N7 A:G490 4.31 K O6 A:G490 3.53 K C6 A:G491 4.22 K C5 A:G491 4.48 K N7 A:G491 3.98 K O6 A:G491 3.33 K O6 A:G492 4.34 interactive model: Potassium binding site 32 out of 56 in 2uuc Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 32 of Potassium in the PDB 2uuc. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Potassium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: C121, A: G122, A: C233, A: C234, conact list: Atom Atom Distance (A) K C3' A:C121 4.66 K O3' A:C121 4.43 K OP1 A:G122 4.87 K P A:G122 3.88 K OP2 A:G122 2.41 K C5' A:G122 4.98 K O5' A:G122 4.65 K OP1 A:C233 3.86 K P A:C233 4.84 K O5' A:C233 4.98 K OP1 A:C234 4.85 K OP2 A:C234 4.24 interactive model: Potassium binding site 33 out of 56 in 2uuc Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 33 of Potassium in the PDB 2uuc. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Potassium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: E: Leu43, E: Asn65, E: Tyr133, E: Met136, E: Arg140, conact list: Atom Atom Distance (A) K CB E:Leu43 4.68 K ND2 E:Asn65 3.29 K OD1 E:Asn65 3.98 K CG E:Asn65 4.06 K CE2 E:Tyr133 4.69 K CD2 E:Tyr133 4.30 K CB E:Met136 3.68 K CE E:Met136 4.32 K CG E:Met136 3.80 K SD E:Met136 4.93 K CZ E:Arg140 4.12 K NH2 E:Arg140 3.24 K NH1 E:Arg140 4.11 interactive model: Potassium binding site 34 out of 56 in 2uuc Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 34 of Potassium in the PDB 2uuc. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Potassium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: C175, A: C176, T: Arg25, T: Lys29, T: Thr71, conact list: Atom Atom Distance (A) K OP1 A:C175 4.83 K C3' A:C175 4.20 K O3' A:C175 3.32 K C5' A:C175 3.92 K C4' A:C175 4.00 K O5' A:C175 4.92 K OP1 A:C176 3.74 K P A:C176 4.14 K OP2 A:C176 4.86 K CB T:Arg25 3.87 K CD T:Arg25 3.08 K CG T:Arg25 4.05 K NE T:Arg25 4.01 K CE T:Lys29 4.22 K CD T:Lys29 4.65 K NZ T:Lys29 3.68 K OG1 T:Thr71 4.95 interactive model: Potassium binding site 35 out of 56 in 2uuc Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 35 of Potassium in the PDB 2uuc. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Potassium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: C810, A: C811, A: C812, conact list: Atom Atom Distance (A) K C6 A:C810 4.07 K C5 A:C810 3.45 K C4 A:C810 4.11 K N4 A:C810 4.20 K N3 A:C811 4.61 K C6 A:C811 4.40 K C5 A:C811 3.14 K C4 A:C811 3.31 K N4 A:C811 2.68 K C4 A:C812 4.42 K N4 A:C812 3.25 interactive model: Potassium binding site 36 out of 56 in 2uuc Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 36 of Potassium in the PDB 2uuc. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Potassium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: G226, A: G227, A: A228, conact list: Atom Atom Distance (A) K C8 A:G226 4.77 K C6 A:G226 3.65 K N1 A:G226 4.79 K C5 A:G226 3.91 K N7 A:G226 3.68 K O6 A:G226 3.03 K C8 A:G227 4.84 K C6 A:G227 4.10 K C5 A:G227 4.25 K N7 A:G227 3.70 K O6 A:G227 3.32 K N6 A:A228 4.54 interactive model: Potassium binding site 37 out of 56 in 2uuc Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 37 of Potassium in the PDB 2uuc. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Potassium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: U1381, G: Arg78, G: Trp156, conact list: Atom Atom Distance (A) K N3 A:U1381 4.13 K C2 A:U1381 3.88 K C6 A:U1381 3.77 K N1 A:U1381 3.69 K C5 A:U1381 4.05 K C1' A:U1381 4.23 K O2 A:U1381 4.39 K O4' A:U1381 4.43 K C4 A:U1381 4.27 K CD G:Arg78 4.93 K CZ G:Arg78 3.83 K CG G:Arg78 4.34 K NE G:Arg78 4.23 K NH2 G:Arg78 3.80 K NH1 G:Arg78 4.12 K CD2 G:Trp156 4.67 K CE3 G:Trp156 4.57 K CZ3 G:Trp156 4.59 K CZ2 G:Trp156 4.84 K CE2 G:Trp156 4.80 K CH2 G:Trp156 4.73 interactive model: Potassium binding site 38 out of 56 in 2uuc Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 38 of Potassium in the PDB 2uuc. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Potassium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: G927, A: G928, A: G929, A: C1389, conact list: Atom Atom Distance (A) K O6 A:G927 4.78 K C8 A:G928 4.61 K C6 A:G928 3.49 K N1 A:G928 4.70 K C5 A:G928 3.75 K N7 A:G928 3.45 K O6 A:G928 2.78 K C6 A:G929 4.34 K C5 A:G929 4.60 K N7 A:G929 4.13 K O6 A:G929 3.49 K N4 A:C1389 4.91 interactive model: Potassium binding site 39 out of 56 in 2uuc Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 39 of Potassium in the PDB 2uuc. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Potassium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: G1442, A: G1442A, A: A1442B, A: G1443, conact list: Atom Atom Distance (A) K N3 A:G1442 3.21 K N2 A:G1442 2.87 K C3' A:G1442 3.88 K C2 A:G1442 3.36 K N1 A:G1442 4.57 K O3' A:G1442 4.15 K C4 A:G1442 4.38 K C2' A:G1442 4.05 K O2' A:G1442 5.00 K P A:G1442A 3.76 K OP2 A:G1442A 3.31 K C5' A:G1442A 4.23 K O5' A:G1442A 3.18 K N9 A:A1442B 3.72 K OP1 A:A1442B 4.57 K N3 A:A1442B 3.60 K C3' A:A1442B 2.81 K C8 A:A1442B 4.50 K C2 A:A1442B 4.35 K C5 A:A1442B 4.49 K C1' A:A1442B 3.79 K N7 A:A1442B 4.96 K O3' A:A1442B 3.77 K O4' A:A1442B 3.78 K C4 A:A1442B 3.67 K C5' A:A1442B 3.48 K C2' A:A1442B 3.49 K C4' A:A1442B 3.52 K O5' A:A1442B 4.61 K O2' A:A1442B 4.84 K C8 A:G1443 4.82 K P A:G1443 4.02 K N7 A:G1443 4.72 K OP2 A:G1443 3.09 K O5' A:G1443 4.68 interactive model: Potassium binding site 40 out of 56 in 2uuc Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 40 of Potassium in the PDB 2uuc. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Potassium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: G942, A: C1336, A: G1337, conact list: Atom Atom Distance (A) K OP2 A:G942 4.51 K C2 A:C1336 4.37 K N1 A:C1336 4.88 K C1' A:C1336 4.36 K O2 A:C1336 3.23 K O3' A:C1336 4.46 K C2' A:C1336 4.36 K O2' A:C1336 3.27 K C6 A:G1337 4.78 K C5 A:G1337 4.99 K P A:G1337 4.68 K N7 A:G1337 4.71 K OP2 A:G1337 3.64 K O6 A:G1337 4.19 interactive model: Potassium binding site 41 out of 56 in 2uuc Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 41 of Potassium in the PDB 2uuc. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Potassium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: A663, A: G664, A: G741, A: G742, A: U743, Z: Mg1020, Z: K1201, conact list: Atom Atom Distance (A) K N6 A:A663 4.92 K C6 A:G664 4.97 K O6 A:G664 4.02 K C8 A:G741 4.93 K C6 A:G741 4.14 K C5 A:G741 4.30 K N7 A:G741 3.87 K O6 A:G741 3.48 K C8 A:G742 4.83 K C6 A:G742 3.94 K C5 A:G742 4.14 K N7 A:G742 3.67 K O6 A:G742 3.17 K O4 A:U743 4.61 K MG Z:Mg1020 3.11 K K Z:K1201 3.94 interactive model: Potassium binding site 42 out of 56 in 2uuc Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 42 of Potassium in the PDB 2uuc. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Potassium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: G771, A: A802, A: G803, conact list: Atom Atom Distance (A) K OP2 A:G771 4.58 K C3' A:A802 4.51 K O3' A:A802 3.52 K C2' A:A802 4.71 K C4' A:A802 4.68 K O2' A:A802 3.74 K OP1 A:G803 3.85 K P A:G803 4.43 interactive model: Potassium binding site 43 out of 56 in 2uuc Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 43 of Potassium in the PDB 2uuc. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Potassium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: G517, A: G530, A: A532, A: A533, C: Glu161, conact list: Atom Atom Distance (A) K N2 A:G517 4.77 K OP1 A:G530 3.78 K P A:G530 4.53 K OP2 A:G530 4.24 K OP1 A:A532 4.11 K P A:A532 4.93 K O3' A:A532 4.72 K O5' A:A532 4.31 K C5' A:A533 4.36 K O5' A:A533 4.64 K OE1 C:Glu161 4.19 K OE2 C:Glu161 4.72 K CD C:Glu161 4.85 interactive model: Potassium binding site 44 out of 56 in 2uuc Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 44 of Potassium in the PDB 2uuc. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Potassium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: A767, A: C805, A: C806, conact list: Atom Atom Distance (A) K OP1 A:A767 4.55 K OP1 A:C805 3.33 K P A:C805 4.09 K O3' A:C805 4.75 K OP2 A:C805 4.16 K O5' A:C805 4.51 K OP1 A:C806 4.08 K P A:C806 4.04 K OP2 A:C806 3.16 interactive model: Potassium binding site 45 out of 56 in 2uuc Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 45 of Potassium in the PDB 2uuc. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Potassium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: C811, A: C812, A: A901, A: G902, A: G903, conact list: Atom Atom Distance (A) K C3' A:C811 4.07 K O3' A:C811 2.94 K C2' A:C811 4.15 K C4' A:C811 4.97 K O2' A:C811 3.38 K OP1 A:C812 2.63 K P A:C812 3.27 K OP2 A:C812 4.69 K C5' A:C812 3.16 K C4' A:C812 4.50 K O5' A:C812 3.67 K C2 A:A901 4.31 K C6 A:A901 3.51 K N1 A:A901 3.51 K C5 A:A901 4.35 K N6 A:A901 3.36 K N9 A:G902 4.81 K N3 A:G902 3.57 K N2 A:G902 4.07 K C2 A:G902 4.30 K C1' A:G902 4.09 K C4 A:G902 4.59 K C2' A:G902 3.79 K O2' A:G902 2.96 K N9 A:G903 4.48 K C8 A:G903 4.83 K C1' A:G903 3.74 K O4' A:G903 3.00 K C5' A:G903 4.48 K C2' A:G903 4.94 K C4' A:G903 3.97 interactive model: Potassium binding site 46 out of 56 in 2uuc Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 46 of Potassium in the PDB 2uuc. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Potassium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: A303, A: U304, A: G305, Z: K1187, Z: K1192, conact list: Atom Atom Distance (A) K N6 A:A303 4.79 K N7 A:A303 4.48 K N3 A:U304 4.98 K C5 A:U304 4.30 K C4 A:U304 3.81 K O4 A:U304 2.76 K O6 A:G305 4.96 K K Z:K1187 3.71 K K Z:K1192 4.06 interactive model: Potassium binding site 47 out of 56 in 2uuc Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 47 of Potassium in the PDB 2uuc. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Potassium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: A151, A: C153, A: G167, A: G168, Z: Mg1101, conact list: Atom Atom Distance (A) K OP1 A:A151 3.55 K P A:A151 3.73 K OP2 A:A151 3.04 K C5' A:A151 4.41 K O5' A:A151 4.59 K N4 A:C153 4.78 K C6 A:G167 4.32 K C5 A:G167 4.51 K N7 A:G167 4.09 K O6 A:G167 3.62 K C6 A:G168 4.18 K C5 A:G168 4.64 K N7 A:G168 4.31 K O6 A:G168 3.16 K MG Z:Mg1101 4.23 interactive model: Potassium binding site 48 out of 56 in 2uuc Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 48 of Potassium in the PDB 2uuc. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Potassium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: E: Arg37, E: Gln38, E: Leu71, E: Gly114, E: Val115, conact list: Atom Atom Distance (A) K O E:Arg37 3.47 K C E:Arg37 4.39 K N E:Gln38 4.98 K CA E:Gln38 4.76 K CD1 E:Leu71 3.35 K CD2 E:Leu71 4.73 K CG E:Leu71 4.54 K O E:Gly114 2.66 K C E:Gly114 3.52 K CA E:Gly114 3.68 K N E:Val115 4.77 interactive model: Potassium binding site 49 out of 56 in 2uuc Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 49 of Potassium in the PDB 2uuc. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Potassium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: C1054, A: U1196, A: G1197, Z: Mg1129, conact list: Atom Atom Distance (A) K OP1 A:C1054 4.58 K P A:C1054 4.64 K OP2 A:C1054 3.65 K C3' A:U1196 4.33 K C1' A:U1196 4.67 K O3' A:U1196 3.03 K O4' A:U1196 4.89 K C2' A:U1196 4.88 K C4' A:U1196 4.70 K O2' A:U1196 4.75 K OP1 A:G1197 4.72 K C8 A:G1197 4.99 K P A:G1197 3.38 K N7 A:G1197 4.91 K OP2 A:G1197 2.60 K O5' A:G1197 4.04 K MG Z:Mg1129 3.13 interactive model: Potassium binding site 50 out of 56 in 2uuc Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 50 of Potassium in the PDB 2uuc. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Potassium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: C862, A: U863, E: Glu83, conact list: Atom Atom Distance (A) K OP1 A:C862 4.24 K OP2 A:U863 4.25 K O E:Glu83 3.40 K N E:Glu83 4.82 K CB E:Glu83 3.80 K OE2 E:Glu83 4.93 K CD E:Glu83 4.76 K C E:Glu83 4.23 K CG E:Glu83 4.74 K CA E:Glu83 4.55 interactive model: Potassium binding site 51 out of 56 in 2uuc Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 51 of Potassium in the PDB 2uuc. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Potassium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: G515, A: U516, A: G517, A: U531, Z: Mg1165, conact list: Atom Atom Distance (A) K OP1 A:G515 4.57 K P A:G515 4.59 K OP2 A:G515 3.93 K O5' A:G515 4.83 K C5 A:U516 4.62 K OP2 A:U516 3.97 K C6 A:G517 4.06 K C5 A:G517 4.58 K N7 A:G517 4.34 K O6 A:G517 3.03 K N3 A:U531 4.41 K C2 A:U531 3.96 K O2 A:U531 2.89 K MG Z:Mg1165 4.95 interactive model: Potassium binding site 52 out of 56 in 2uuc Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 52 of Potassium in the PDB 2uuc. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Potassium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: G724, A: G725, Z: Mg1007, conact list: Atom Atom Distance (A) K N9 A:G724 4.91 K OP1 A:G724 4.30 K C8 A:G724 3.85 K C6 A:G724 4.67 K C5 A:G724 4.16 K P A:G724 3.87 K N7 A:G724 3.26 K OP2 A:G724 2.68 K O5' A:G724 4.52 K O6 A:G724 4.51 K N7 A:G725 4.37 K O6 A:G725 4.88 K MG Z:Mg1007 4.67 interactive model: Potassium binding site 53 out of 56 in 2uuc Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 53 of Potassium in the PDB 2uuc. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Potassium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: A53, A: G357, A: U358, A: U359, conact list: Atom Atom Distance (A) K N6 A:A53 4.66 K C6 A:G357 4.52 K O6 A:G357 3.97 K C5 A:U358 4.31 K C4 A:U358 3.94 K O4 A:U358 2.97 K C4 A:U359 4.42 K O4 A:U359 3.37 interactive model: Potassium binding site 54 out of 56 in 2uuc Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 54 of Potassium in the PDB 2uuc. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Potassium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: G1405, A: U1406, A: G1488, Z: Par1, conact list: Atom Atom Distance (A) K O3' A:G1405 4.13 K OP1 A:U1406 2.70 K P A:U1406 3.78 K OP2 A:U1406 4.28 K OP1 A:G1488 2.74 K P A:G1488 3.93 K OP2 A:G1488 4.21 K O5' A:G1488 4.88 K N24 Z:Par1 4.40 interactive model: Potassium binding site 55 out of 56 in 2uuc Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 55 of Potassium in the PDB 2uuc. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Potassium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: C137, A: G138, A: G226, A: G227, conact list: Atom Atom Distance (A) K O2 A:C137 4.86 K N9 A:G138 4.78 K N3 A:G138 4.88 K C1' A:G138 4.02 K O4' A:G138 4.25 K O2' A:G138 4.73 K N2 A:G226 4.09 K C1' A:G227 4.56 K O4' A:G227 4.54 K O2' A:G227 4.35 interactive model: Potassium binding site 56 out of 56 in 2uuc Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 56 of Potassium in the PDB 2uuc. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Potassium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: C866, A: G867, A: A919, conact list: Atom Atom Distance (A) K C3' A:C866 4.59 K O3' A:C866 4.06 K C2' A:C866 3.86 K O2' A:C866 2.89 K OP1 A:G867 4.00 K P A:G867 4.11 K C5' A:G867 4.30 K C4' A:G867 4.64 K O5' A:G867 3.34 K OP1 A:A919 4.78 interactive model: