Atomistry » Potassium » PDB 2o8l-2qxl » 2qjf
Atomistry »
  Potassium »
    PDB 2o8l-2qxl »
      2qjf »

Potassium in PDB 2qjf: Crystal Structure of Atp-Sulfurylase Domain of Human Paps Synthetase 1

Enzymatic activity of Crystal Structure of Atp-Sulfurylase Domain of Human Paps Synthetase 1

All present enzymatic activity of Crystal Structure of Atp-Sulfurylase Domain of Human Paps Synthetase 1:
2.7.7.4;

Protein crystallography data

The structure of Crystal Structure of Atp-Sulfurylase Domain of Human Paps Synthetase 1, PDB code: 2qjf was solved by N.Sekulic, A.Lavie, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 2.20
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 63.100, 99.900, 75.900, 90.00, 113.00, 90.00
R / Rfree (%) 16.8 / 22.5

Potassium Binding Sites:

The binding sites of Potassium atom in the Crystal Structure of Atp-Sulfurylase Domain of Human Paps Synthetase 1 (pdb code 2qjf). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total 2 binding sites of Potassium where determined in the Crystal Structure of Atp-Sulfurylase Domain of Human Paps Synthetase 1, PDB code: 2qjf:
Jump to Potassium binding site number: 1; 2;

Potassium binding site 1 out of 2 in 2qjf

Go back to Potassium Binding Sites List in 2qjf
Potassium binding site 1 out of 2 in the Crystal Structure of Atp-Sulfurylase Domain of Human Paps Synthetase 1


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of Crystal Structure of Atp-Sulfurylase Domain of Human Paps Synthetase 1 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K1001

b:28.3
occ:1.00
N A:HIS314 3.4 35.4 1.0
N A:ASP374 3.5 34.3 1.0
CA A:THR313 3.7 31.5 1.0
CA A:GLY373 4.0 35.5 1.0
C A:THR313 4.0 33.2 1.0
CG A:ASP374 4.1 37.1 1.0
CB A:THR313 4.1 31.5 1.0
CB A:ASP374 4.2 34.6 1.0
OD2 A:ASP374 4.2 40.0 1.0
C A:GLY373 4.3 35.0 1.0
CB A:HIS314 4.4 38.8 1.0
OD1 A:ASP374 4.4 40.5 1.0
CA A:HIS314 4.5 38.2 1.0
CA A:ASP374 4.5 33.9 1.0
CG2 A:THR313 4.5 30.5 1.0
O A:ALA312 4.6 28.7 1.0
O A:HOH1064 4.6 33.1 1.0
N A:THR313 4.9 30.3 1.0
CD1 A:TRP375 4.9 34.5 1.0

Potassium binding site 2 out of 2 in 2qjf

Go back to Potassium Binding Sites List in 2qjf
Potassium binding site 2 out of 2 in the Crystal Structure of Atp-Sulfurylase Domain of Human Paps Synthetase 1


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 2 of Crystal Structure of Atp-Sulfurylase Domain of Human Paps Synthetase 1 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:K1002

b:44.7
occ:1.00
N B:ASP374 3.6 42.0 1.0
N B:HIS314 3.6 52.4 1.0
OD2 B:ASP374 3.7 50.0 1.0
CA B:THR313 3.8 49.0 1.0
CB B:ASP374 4.0 42.6 1.0
CG B:ASP374 4.1 45.5 1.0
CB B:THR313 4.1 48.9 1.0
C B:THR313 4.2 50.4 1.0
CA B:GLY373 4.2 42.7 1.0
C B:GLY373 4.4 42.4 1.0
CA B:ASP374 4.4 42.1 1.0
CG2 B:THR313 4.6 48.8 1.0
CB B:HIS314 4.7 55.0 1.0
CA B:HIS314 4.7 54.6 1.0
O B:ALA312 4.9 44.9 1.0

Reference:

N.Sekulic, I.Paarmann, M.Konrad, A.Lavie. Atp-Sulfurylase Domain of Human Bifunctional Paps-Synthetase Oscillates Between Dimeric and Monomeric Forms To Be Published.
Page generated: Mon Aug 12 06:54:30 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy