Atomistry » Potassium » PDB 2fxi-2hw8 » 2hjf
Atomistry »
  Potassium »
    PDB 2fxi-2hw8 »
      2hjf »

Potassium in PDB 2hjf: Potassium Channel Kcsa-Fab Complex with Tetrabutylammonium (Tba)

Protein crystallography data

The structure of Potassium Channel Kcsa-Fab Complex with Tetrabutylammonium (Tba), PDB code: 2hjf was solved by J.D.Faraldo-Gomez, E.Kutluay, V.Jogini, Y.Zhao, L.Heginbotham, B.Roux, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.00 / 2.90
Space group I 4
Cell size a, b, c (Å), α, β, γ (°) 156.200, 156.200, 76.316, 90.00, 90.00, 90.00
R / Rfree (%) 22.5 / 28.4

Potassium Binding Sites:

The binding sites of Potassium atom in the Potassium Channel Kcsa-Fab Complex with Tetrabutylammonium (Tba) (pdb code 2hjf). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total 4 binding sites of Potassium where determined in the Potassium Channel Kcsa-Fab Complex with Tetrabutylammonium (Tba), PDB code: 2hjf:
Jump to Potassium binding site number: 1; 2; 3; 4;

Potassium binding site 1 out of 4 in 2hjf

Go back to Potassium Binding Sites List in 2hjf
Potassium binding site 1 out of 4 in the Potassium Channel Kcsa-Fab Complex with Tetrabutylammonium (Tba)


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of Potassium Channel Kcsa-Fab Complex with Tetrabutylammonium (Tba) within 5.0Å range:
probe atom residue distance (Å) B Occ
C:K3001

b:41.4
occ:0.25
O C:TYR78 3.2 18.8 1.0
K C:K3002 3.4 19.0 0.2
C C:TYR78 3.7 18.4 1.0
O C:GLY77 3.9 15.9 1.0
CA C:TYR78 4.3 19.0 1.0
N C:GLY79 4.4 18.0 1.0
CA C:GLY79 4.6 18.2 1.0
C C:GLY77 4.9 16.6 1.0

Potassium binding site 2 out of 4 in 2hjf

Go back to Potassium Binding Sites List in 2hjf
Potassium binding site 2 out of 4 in the Potassium Channel Kcsa-Fab Complex with Tetrabutylammonium (Tba)


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 2 of Potassium Channel Kcsa-Fab Complex with Tetrabutylammonium (Tba) within 5.0Å range:
probe atom residue distance (Å) B Occ
C:K3002

b:19.0
occ:0.25
K C:K3003 3.2 14.6 0.2
O C:GLY77 3.2 15.9 1.0
O C:VAL76 3.3 12.0 1.0
K C:K3001 3.4 41.4 0.2
C C:GLY77 4.2 16.6 1.0
C C:VAL76 4.4 14.1 1.0

Potassium binding site 3 out of 4 in 2hjf

Go back to Potassium Binding Sites List in 2hjf
Potassium binding site 3 out of 4 in the Potassium Channel Kcsa-Fab Complex with Tetrabutylammonium (Tba)


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 3 of Potassium Channel Kcsa-Fab Complex with Tetrabutylammonium (Tba) within 5.0Å range:
probe atom residue distance (Å) B Occ
C:K3003

b:14.6
occ:0.25
O C:THR75 3.1 18.8 1.0
O C:VAL76 3.2 12.0 1.0
K C:K3002 3.2 19.0 0.2
K C:K3004 3.3 33.5 0.2
C C:VAL76 4.0 14.1 1.0
CA C:VAL76 4.1 13.8 1.0
C C:THR75 4.2 18.4 1.0
N C:VAL76 4.7 15.6 1.0

Potassium binding site 4 out of 4 in 2hjf

Go back to Potassium Binding Sites List in 2hjf
Potassium binding site 4 out of 4 in the Potassium Channel Kcsa-Fab Complex with Tetrabutylammonium (Tba)


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 4 of Potassium Channel Kcsa-Fab Complex with Tetrabutylammonium (Tba) within 5.0Å range:
probe atom residue distance (Å) B Occ
C:K3004

b:33.5
occ:0.25
K C:K3003 3.3 14.6 0.2
OG1 C:THR75 3.4 20.9 1.0
O C:THR75 3.4 18.8 1.0
CB C:THR75 3.8 21.1 1.0
C11 C:TBA1 4.1 12.0 0.2
C C:THR75 4.1 18.4 1.0
C41 C:TBA1 4.4 12.0 0.2
CA C:THR75 4.7 20.4 1.0
C42 C:TBA1 4.8 12.0 0.2
CG2 C:THR75 4.9 20.7 1.0
N1 C:TBA1 4.9 14.0 0.2
N C:VAL76 5.0 15.6 1.0

Reference:

J.D.Faraldo-Gomez, E.Kutluay, V.Jogini, Y.Zhao, L.Heginbotham, B.Roux. Mechanism of Intracellular Block of the Kcsa K(+) Channel By Tetrabutylammonium: Insights From X-Ray Crystallography, Electrophysiology and Replica-Exchange Molecular Dynamics Simulations. J.Mol.Biol. V. 365 649 2007.
ISSN: ISSN 0022-2836
PubMed: 17070844
DOI: 10.1016/J.JMB.2006.09.069
Page generated: Mon Aug 12 06:34:31 2024

Last articles

Ar in 6Q8R
Ar in 6ZMC
Ar in 6RA8
Ar in 6Q8S
Ar in 6IA3
Ar in 6IA1
Ar in 6Q8Q
Ar in 6I9Z
Ar in 1C6F
Ar in 6I9X
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy