Atomistry » Potassium » PDB 2c44-2frz » 2fpg
Atomistry »
  Potassium »
    PDB 2c44-2frz »
      2fpg »

Potassium in PDB 2fpg: Crystal Structure of Pig Gtp-Specific Succinyl-Coa Synthetase in Complex with Gdp

Enzymatic activity of Crystal Structure of Pig Gtp-Specific Succinyl-Coa Synthetase in Complex with Gdp

All present enzymatic activity of Crystal Structure of Pig Gtp-Specific Succinyl-Coa Synthetase in Complex with Gdp:
6.2.1.4;

Protein crystallography data

The structure of Crystal Structure of Pig Gtp-Specific Succinyl-Coa Synthetase in Complex with Gdp, PDB code: 2fpg was solved by M.E.Fraser, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 115.86 / 2.96
Space group P 65
Cell size a, b, c (Å), α, β, γ (°) 133.780, 133.780, 73.090, 90.00, 90.00, 120.00
R / Rfree (%) 20.1 / 27.5

Potassium Binding Sites:

The binding sites of Potassium atom in the Crystal Structure of Pig Gtp-Specific Succinyl-Coa Synthetase in Complex with Gdp (pdb code 2fpg). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total only one binding site of Potassium was determined in the Crystal Structure of Pig Gtp-Specific Succinyl-Coa Synthetase in Complex with Gdp, PDB code: 2fpg:

Potassium binding site 1 out of 1 in 2fpg

Go back to Potassium Binding Sites List in 2fpg
Potassium binding site 1 out of 1 in the Crystal Structure of Pig Gtp-Specific Succinyl-Coa Synthetase in Complex with Gdp


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of Crystal Structure of Pig Gtp-Specific Succinyl-Coa Synthetase in Complex with Gdp within 5.0Å range:
probe atom residue distance (Å) B Occ
B:K396

b:76.1
occ:1.00
OD2 B:ASP220 2.6 42.7 1.0
O3B B:GDP397 2.9 72.0 1.0
O1A B:GDP397 3.0 77.5 1.0
O B:ASN206 3.2 23.7 1.0
NZ B:LYS222 3.5 28.2 1.0
O2A B:GDP397 3.5 77.5 1.0
PA B:GDP397 3.5 78.4 1.0
O3A B:GDP397 3.6 75.5 1.0
CG B:ASP220 3.6 41.4 1.0
PB B:GDP397 3.9 72.0 1.0
CE B:LYS222 4.0 28.9 1.0
CB B:ASP220 4.1 38.9 1.0
C B:ASN206 4.3 23.6 1.0
CB B:ASN206 4.4 25.4 1.0
CD B:LYS222 4.5 25.8 1.0
OD1 B:ASP220 4.6 42.3 1.0
O1B B:GDP397 4.8 70.1 1.0
CA B:ASN206 4.8 24.1 1.0
CG B:ASN206 5.0 28.4 1.0

Reference:

M.E.Fraser, K.Hayakawa, M.S.Hume, D.G.Ryan, E.R.Brownie. Interactions of Gtp with the Atp-Grasp Domain of Gtp-Specific Succinyl-Coa Synthetase J.Biol.Chem. V. 281 11058 2006.
ISSN: ISSN 0021-9258
PubMed: 16481318
DOI: 10.1074/JBC.M511785200
Page generated: Sun Dec 13 23:09:47 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy