Atomistry » Potassium » PDB 2adp-2c13 » 2adp
Atomistry »
  Potassium »
    PDB 2adp-2c13 »
      2adp »

Potassium in PDB 2adp: Nitrated Human Manganese Superoxide Dismutase

Enzymatic activity of Nitrated Human Manganese Superoxide Dismutase

All present enzymatic activity of Nitrated Human Manganese Superoxide Dismutase:
1.15.1.1;

Protein crystallography data

The structure of Nitrated Human Manganese Superoxide Dismutase, PDB code: 2adp was solved by P.Quint, R.Reutzel, R.Mikulski, R.Mckenna, D.N.Silverman, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 2.40
Space group P 61 2 2
Cell size a, b, c (Å), α, β, γ (°) 81.270, 81.270, 242.181, 90.00, 90.00, 120.00
R / Rfree (%) 19.7 / 21.8

Other elements in 2adp:

The structure of Nitrated Human Manganese Superoxide Dismutase also contains other interesting chemical elements:

Manganese (Mn) 1 atom

Potassium Binding Sites:

The binding sites of Potassium atom in the Nitrated Human Manganese Superoxide Dismutase (pdb code 2adp). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total only one binding site of Potassium was determined in the Nitrated Human Manganese Superoxide Dismutase, PDB code: 2adp:

Potassium binding site 1 out of 1 in 2adp

Go back to Potassium Binding Sites List in 2adp
Potassium binding site 1 out of 1 in the Nitrated Human Manganese Superoxide Dismutase


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of Nitrated Human Manganese Superoxide Dismutase within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K200

b:34.9
occ:1.00
ND1 A:HIS2 3.7 25.7 1.0
NE2 A:HIS71 3.7 20.0 1.0
CA A:HIS2 4.1 31.8 1.0
CB A:HIS2 4.2 29.8 1.0
N A:SER3 4.3 26.1 1.0
CG A:HIS2 4.4 26.7 1.0
CD2 A:HIS71 4.6 18.8 1.0
CE1 A:HIS71 4.7 18.3 1.0
CE1 A:HIS2 4.8 26.9 1.0
C A:HIS2 4.8 28.9 1.0
O A:SER3 4.8 26.2 1.0
O A:LYS1 5.0 44.0 1.0

Reference:

P.Quint, R.Reutzel, R.Mikulski, R.Mckenna, D.N.Silverman. Crystal Structure of Nitrated Human Manganese Superoxide Dismutase: Mechanism of Inactivation. Free Radic.Biol.Med. V. 40 453 2006.
ISSN: ISSN 0891-5849
PubMed: 16443160
DOI: 10.1016/J.FREERADBIOMED.2005.08.045
Page generated: Sun Dec 13 23:08:45 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy