Chemical elements
  Potassium
    Isotopes
    Energy
    Preparation
    Physical Properties
    Chemical Properties
    PDB 1a3w-1dul
    PDB 1dz4-1j95
    PDB 1jbr-1lqp
    PDB 1lrt-1o07
    PDB 1o76-1qb9
    PDB 1qj5-1t86
    PDB 1t87-1vq9
    PDB 1vqk-1yj9
      1vqk
      1vql
      1vqm
      1vqn
      1vqo
      1vqp
      1w0i
      1w19
      1w22
      1w29
      1w2b
      1w54
      1w56
      1w5o
      1w5p
      1w85
      1wcf
      1wci
      1wjx
      1wth
      1wxx
      1x7w
      1x7x
      1x7y
      1x7z
      1x80
      1xav
      1xck
      1xgk
      1xky
      1xl4
      1xl6
      1xp5
      1xr6
      1xra
      1xrb
      1xrc
      1xu4
      1y1n
      1y39
      1y3s
      1y8n
      1y8o
      1y8p
      1yhq
      1yi2
      1yij
      1yit
      1yj3
      1yj9
    PDB 1yjn-2aop
    PDB 2apo-2f4v
    PDB 2fbw-2hg9
    PDB 2hh1-2oij
    PDB 2oiy-2uxb
    PDB 2uxc-2x20
    PDB 2x21-3c0y
    PDB 3c0z-3dix
    PDB 3diy-3f5w
    PDB 3f7j-3hqo
    PDB 3hqp-3l01
    PDB 3l0u-3oi5
    PDB 3oia-3r9b
    PDB 3rde-4e6k
    PDB 4edj-8gep

Potassium in the structure of Crystal Structure Analysis of Product Bound Methionine Aminopeptidase Type 1C From Mycobacterium Tuberculosis (pdb 1yj3)






The binding sites of Potassium atom in the structure of Crystal Structure Analysis of Product Bound Methionine Aminopeptidase Type 1C From Mycobacterium Tuberculosis (pdb code 1yj3). This binding sites where shown with 5.0 Angstroms radius around Potassium atom.
The 1yj3 structure was solved by A.ADDLAGATTA, M.L.QUILLIN, O.OMOTOSO, J.O.LIU, B.W.MATTHEWS, with X-Ray Crystallography technique, brief refinement statistics is given in the table below:
Resolution (A)50.0-1.6
Space groupP1211
a (A)49.360
b (A)48.160
c (A)56.540
alpha (°)90.00
beta (°)95.05
gamma (°)90.00
Rfactor (%)20.3
Rfree (%)24.7


Potassium Binding Sites:

Potassium binding site 1 out of 1 in 1yj3


Potassium binding site 1 out of 1 in 1yj3
Click to enlarge
stereopicture of Potassium binding site 1 out of 1 in 1yj3
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 1 of Potassium in the PDB 1yj3. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Potassium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Ser107, A: Leu108, A: Asn109, A: Glu110, A: Val111, A: Ile112, A: Ile127, A: Asn129, A: Thr265, A: Ala266, A: Hoh512, A: Hoh546, A: Hoh570,

conact list:


AtomAtomDistance (A)
KO A:Ser1073.00
KCB A:Ser1074.24
KC A:Ser1073.76
KCA A:Ser1074.66
KO A:Leu1083.71
KN A:Leu1084.35
KC A:Leu1083.65
KCA A:Leu1084.33
KO A:Asn1092.70
KN A:Asn1093.67
KC A:Asn1093.56
KCA A:Asn1093.99
KN A:Glu1104.62
KC A:Glu1104.81
KO A:Val1112.71
KN A:Val1114.14
KCB A:Val1114.71
KC A:Val1113.82
KCA A:Val1114.49
KO A:Ile1124.98
KN A:Ile1124.83
KO A:Ile1274.84
KCD1 A:Ile1274.84
KCG1 A:Ile1274.73
KN A:Asn1294.99
KCB A:Asn1294.95
KO A:Thr2652.73
KN A:Thr2654.45
KCB A:Thr2654.69
KCG2 A:Thr2653.61
KC A:Thr2653.79
KCA A:Thr2654.58
KN A:Ala2664.68
KCA A:Ala2664.83
KO A:Hoh5124.84
KO A:Hoh5464.50
KO A:Hoh5702.73

interactive model:




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