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Potassium in PDB 1wjx: Crystal Sturucture of TT0801 From Thermus Thermophilus

Protein crystallography data

The structure of Crystal Sturucture of TT0801 From Thermus Thermophilus, PDB code: 1wjx was solved by Y.Bessho, R.Shibata, M.Shirouzu, S.Yokoyama, Riken Structuralgenomics/Proteomics Initiative (Rsgi), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.00 / 1.70
Space group P 65
Cell size a, b, c (Å), α, β, γ (°) 74.676, 74.676, 47.038, 90.00, 90.00, 120.00
R / Rfree (%) 22.4 / 22.9

Potassium Binding Sites:

The binding sites of Potassium atom in the Crystal Sturucture of TT0801 From Thermus Thermophilus (pdb code 1wjx). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total only one binding site of Potassium was determined in the Crystal Sturucture of TT0801 From Thermus Thermophilus, PDB code: 1wjx:

Potassium binding site 1 out of 1 in 1wjx

Go back to Potassium Binding Sites List in 1wjx
Potassium binding site 1 out of 1 in the Crystal Sturucture of TT0801 From Thermus Thermophilus


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of Crystal Sturucture of TT0801 From Thermus Thermophilus within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K151

b:15.3
occ:1.00
OD1 A:ASP12 2.2 33.1 1.0
ND1 A:HIS11 2.4 31.5 1.0
CG A:ASP12 2.8 30.3 1.0
OD2 A:ASP12 2.9 33.2 1.0
CE1 A:HIS11 3.3 31.9 1.0
CG A:HIS11 3.4 29.0 1.0
CB A:HIS11 3.6 26.6 1.0
CB A:ASP12 4.2 26.8 1.0
C A:HIS11 4.3 25.6 1.0
N A:ASP12 4.3 23.9 1.0
NE2 A:HIS11 4.4 31.7 1.0
CD2 A:HIS11 4.5 30.3 1.0
NH1 A:ARG8 4.6 31.3 1.0
CA A:HIS11 4.6 25.5 1.0
O A:HIS11 4.7 27.2 1.0
CA A:ASP12 4.7 25.4 1.0
O A:ARG8 4.8 21.2 1.0

Reference:

Y.Bessho, R.Shibata, S.Sekine, K.Murayama, K.Higashijima, C.Hori-Takemoto, M.Shirouzu, S.Kuramitsu, S.Yokoyama. Structural Basis For Functional Mimicry of Long-Variable-Arm Trna By Transfer-Messenger Rna. Proc.Natl.Acad.Sci.Usa V. 104 8293 2007.
ISSN: ISSN 0027-8424
PubMed: 17488812
DOI: 10.1073/PNAS.0700402104
Page generated: Sun Dec 13 23:04:40 2020

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