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Potassium in PDB 1vm0: X-Ray Structure of Gene Product From Arabidopsis Thaliana AT2G34160

Protein crystallography data

The structure of X-Ray Structure of Gene Product From Arabidopsis Thaliana AT2G34160, PDB code: 1vm0 was solved by G.E.Wesenberg, D.W.Smith, G.N.Phillips Jr., E.Bitto, C.A.Bingman, S.T.M.Allard, Center For Eukaryotic Structural Genomics (Cesg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.36 / 1.80
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 59.785, 79.079, 43.730, 90.00, 90.00, 90.00
R / Rfree (%) 17.4 / 22.1

Potassium Binding Sites:

The binding sites of Potassium atom in the X-Ray Structure of Gene Product From Arabidopsis Thaliana AT2G34160 (pdb code 1vm0). This binding sites where shown within 5.0 Angstroms radius around Potassium atom.
In total 2 binding sites of Potassium where determined in the X-Ray Structure of Gene Product From Arabidopsis Thaliana AT2G34160, PDB code: 1vm0:
Jump to Potassium binding site number: 1; 2;

Potassium binding site 1 out of 2 in 1vm0

Go back to Potassium Binding Sites List in 1vm0
Potassium binding site 1 out of 2 in the X-Ray Structure of Gene Product From Arabidopsis Thaliana AT2G34160


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 1 of X-Ray Structure of Gene Product From Arabidopsis Thaliana AT2G34160 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:K301

b:21.4
occ:1.00
O A:ARG22 2.6 13.0 1.0
O A:LYS19 2.6 21.2 1.0
O A:HOH422 2.8 37.0 1.0
OH A:TYR42 2.9 21.8 1.0
O A:LYS20 3.5 19.2 1.0
C A:ARG22 3.7 14.3 1.0
C A:LYS19 3.8 23.9 1.0
C A:LYS20 3.8 20.6 1.0
CZ A:TYR42 3.9 22.7 1.0
CE2 A:TYR42 3.9 22.5 1.0
N A:ARG22 4.0 16.4 1.0
CA A:LYS20 4.0 21.6 1.0
CA A:ARG22 4.3 15.5 1.0
N A:LYS20 4.4 22.9 1.0
N A:ASN21 4.4 18.3 1.0
O A:HOH410 4.6 17.0 1.0
CB A:ARG22 4.7 15.6 1.0
CA A:LYS19 4.7 27.2 1.0
CG A:LYS19 4.7 33.4 1.0
N A:ILE23 4.8 10.7 1.0
C A:ASN21 4.9 15.8 1.0
CA A:ASN21 5.0 17.0 1.0

Potassium binding site 2 out of 2 in 1vm0

Go back to Potassium Binding Sites List in 1vm0
Potassium binding site 2 out of 2 in the X-Ray Structure of Gene Product From Arabidopsis Thaliana AT2G34160


Mono view


Stereo pair view

A full contact list of Potassium with other atoms in the K binding site number 2 of X-Ray Structure of Gene Product From Arabidopsis Thaliana AT2G34160 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:K300

b:18.2
occ:1.00
OE1 B:GLU120 2.7 17.4 1.0
OE2 B:GLU122 2.8 16.8 1.0
O B:GLU120 2.8 25.2 1.0
O B:HOH437 2.8 26.7 1.0
C B:GLU120 3.6 29.5 1.0
CD B:GLU122 3.7 25.7 1.0
CD B:GLU120 3.8 25.8 1.0
CG B:GLU122 3.8 31.8 1.0
CA B:GLU120 3.9 27.7 1.0
CB B:GLU120 4.0 25.9 1.0
CG B:GLU120 4.5 25.2 1.0
OE2 B:GLU120 4.7 19.6 1.0
N B:LYS121 4.8 31.0 1.0
OE1 B:GLU122 4.8 20.3 1.0
O B:LYS121 4.9 35.1 1.0
C B:LYS121 5.0 34.4 1.0

Reference:

Center For Eukaryotic Structural Genomics, G.E.Wesenberg, D.W.Smith, G.N.Phillips Jr., E.Bitto, C.A.Bingman, S.T.M.Allard, Center For Eukaryotic Structural Genomics (Cesg). N/A N/A.
Page generated: Sun Dec 13 23:02:40 2020

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